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Volumn 111, Issue 5, 2014, Pages 1801-1806

Probing large conformational rearrangements in wild-type and mutant spectrin using structural mass spectrometry

Author keywords

Hereditary hemolytic anemia; Protein conformations

Indexed keywords

DIMER; MUTANT PROTEIN; SPECTRIN; TETRAMER;

EID: 84893485432     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1317620111     Document Type: Article
Times cited : (17)

References (30)
  • 1
    • 0034705128 scopus 로고    scopus 로고
    • High throughput protein fold identification by using experimental constraints derived from intramolecular cross-links and mass spectrometry
    • Young MM, et al. (2000) High throughput protein fold identification by using experimental constraints derived from intramolecular cross-links and mass spectrometry. Proc Natl Acad Sci USA 97(11):5802-5806.
    • (2000) Proc Natl Acad Sci USA , vol.97 , Issue.11 , pp. 5802-5806
    • Young, M.M.1
  • 2
    • 77149146167 scopus 로고    scopus 로고
    • Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry
    • Chen ZA, et al. (2010) Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry. EMBO J 29(4):717-726.
    • (2010) EMBO J , vol.29 , Issue.4 , pp. 717-726
    • Chen, Z.A.1
  • 3
    • 84857134729 scopus 로고    scopus 로고
    • Molecular architecture of the 26S proteasome holocomplex determined by an integrative approach
    • Lasker K, et al. (2012) Molecular architecture of the 26S proteasome holocomplex determined by an integrative approach. Proc Natl Acad Sci USA 109(5):1380-1387.
    • (2012) Proc Natl Acad Sci USA , vol.109 , Issue.5 , pp. 1380-1387
    • Lasker, K.1
  • 4
    • 84861102204 scopus 로고    scopus 로고
    • The molecular architecture of the eukaryotic chaperonin TRiC/CCT
    • Leitner A, et al. (2012) The molecular architecture of the eukaryotic chaperonin TRiC/CCT. Structure 20(5):814-825.
    • (2012) Structure , vol.20 , Issue.5 , pp. 814-825
    • Leitner, A.1
  • 5
    • 84866095385 scopus 로고    scopus 로고
    • Structural probing of a protein phosphatase 2A network by chemical cross-linking and mass spectrometry
    • Herzog F, et al. (2012) Structural probing of a protein phosphatase 2A network by chemical cross-linking and mass spectrometry. Science 337(6100):1348-1352.
    • (2012) Science , vol.337 , Issue.6100 , pp. 1348-1352
    • Herzog, F.1
  • 6
    • 84873988417 scopus 로고    scopus 로고
    • Chemical cross-linkers for protein structure studies by mass spectrometry
    • Paramelle D, Miralles G, Subra G, Martinez J (2013) Chemical cross-linkers for protein structure studies by mass spectrometry. Proteomics 13(3-4):438-456.
    • (2013) Proteomics , vol.13 , Issue.3-4 , pp. 438-456
    • Paramelle, D.1    Miralles, G.2    Subra, G.3    Martinez, J.4
  • 7
    • 77955381399 scopus 로고    scopus 로고
    • Probing native protein structures by chemical cross-linking, mass spectrometry, and bioinformatics
    • Leitner A, et al. (2010) Probing native protein structures by chemical cross-linking, mass spectrometry, and bioinformatics. Mol Cell Proteomics 9(8):1634-1649.
    • (2010) Mol Cell Proteomics , vol.9 , Issue.8 , pp. 1634-1649
    • Leitner, A.1
  • 8
    • 33745742438 scopus 로고    scopus 로고
    • Chemical cross-linking and mass spectrometry to map threedimensional protein structures and protein-protein interactions
    • Sinz A (2006) Chemical cross-linking and mass spectrometry to map threedimensional protein structures and protein-protein interactions. Mass Spectrom Rev 25(4):663-682.
    • (2006) Mass Spectrom Rev , vol.25 , Issue.4 , pp. 663-682
    • Sinz, A.1
  • 9
    • 0042349690 scopus 로고    scopus 로고
    • Chemical cross-linking and mass spectrometry for protein structural modeling
    • Back JW, de Jong L, Muijsers AO, de Koster CG (2003) Chemical cross-linking and mass spectrometry for protein structural modeling. J Mol Biol 331(2):303-313.
    • (2003) J Mol Biol , vol.331 , Issue.2 , pp. 303-313
    • Back, J.W.1    De Jong, L.2    Muijsers, A.O.3    De Koster, C.G.4
  • 10
    • 0021891875 scopus 로고
    • The membrane skeleton of human erythrocytes and its implications for more complex cells
    • Bennett V (1985) The membrane skeleton of human erythrocytes and its implications for more complex cells. Annu Rev Biochem 54:273-304.
    • (1985) Annu Rev Biochem , vol.54 , pp. 273-304
    • Bennett, V.1
  • 11
    • 0027333413 scopus 로고
    • The spectrin-based membrane skeleton and micronscale organization of the plasma membrane
    • Bennett V, Gilligan DM (1993) The spectrin-based membrane skeleton and micronscale organization of the plasma membrane. Annu Rev Cell Biol 9:27-66.
    • (1993) Annu Rev Cell Biol , vol.9 , pp. 27-66
    • Bennett, V.1    Gilligan, D.M.2
  • 12
    • 0026470325 scopus 로고
    • Analysis of human red cell spectrin tetramer (head-to-head) assembly using complementary univalent peptides
    • DeSilva TM, Peng KC, Speicher KD, Speicher DW (1992) Analysis of human red cell spectrin tetramer (head-to-head) assembly using complementary univalent peptides. Biochemistry 31(44):10872-10878.
    • (1992) Biochemistry , vol.31 , Issue.44 , pp. 10872-10878
    • Desilva, T.M.1    Peng, K.C.2    Speicher, K.D.3    Speicher, D.W.4
  • 13
    • 0027478129 scopus 로고
    • Mutations involving the spectrin heterodimer contact site: Clinical expression and alterations in specific function
    • Delaunay J, Dhermy D (1993) Mutations involving the spectrin heterodimer contact site: Clinical expression and alterations in specific function. Semin Hematol 30(1): 21-33.
    • (1993) Semin Hematol , vol.30 , Issue.1 , pp. 21-33
    • Delaunay, J.1    Dhermy, D.2
  • 14
    • 1942445176 scopus 로고    scopus 로고
    • Hereditary elliptocytosis: Spectrin and protein 4. 1R
    • Gallagher PG (2004) Hereditary elliptocytosis: Spectrin and protein 4.1R. Semin Hematol 41(2):142-164.
    • (2004) Semin Hematol , vol.41 , Issue.2 , pp. 142-164
    • Gallagher, P.G.1
  • 15
    • 0026589161 scopus 로고
    • A common type of the spectrin alpha i 46-50a-kD peptide abnormality in hereditary elliptocytosis and pyropoikilocytosis is associated with a mutation distant from the proteolytic cleavage site. Evidence for the functional importance of the triple helical model of spectrin
    • Gallagher PG, et al. (1992) A common type of the spectrin alpha I 46-50a-kD peptide abnormality in hereditary elliptocytosis and pyropoikilocytosis is associated with a mutation distant from the proteolytic cleavage site. Evidence for the functional importance of the triple helical model of spectrin. J Clin Invest 89(3):892-898.
    • (1992) J Clin Invest , vol.89 , Issue.3 , pp. 892-898
    • Gallagher, P.G.1
  • 16
    • 34147151815 scopus 로고    scopus 로고
    • Pathogenic proline mutation in the linker between spectrin repeats: Disease caused by spectrin unfolding
    • Johnson CP, et al. (2007) Pathogenic proline mutation in the linker between spectrin repeats: disease caused by spectrin unfolding. Blood 109(8):3538-3543.
    • (2007) Blood , vol.109 , Issue.8 , pp. 3538-3543
    • Johnson, C.P.1
  • 17
    • 0023193897 scopus 로고
    • Mutant forms of spectrin alpha-subunits in hereditary elliptocytosis
    • Marchesi SL, et al. (1987) Mutant forms of spectrin alpha-subunits in hereditary elliptocytosis. J Clin Invest 80(1):191-198.
    • (1987) J Clin Invest , vol.80 , Issue.1 , pp. 191-198
    • Marchesi, S.L.1
  • 19
    • 0026076633 scopus 로고
    • Heterogeneity of the molecular basis of hereditary pyropoikilocytosis and hereditary elliptocytosis associated with increased levels of the spectrin alpha I/74-kilodalton tryptic peptide
    • Floyd PB, et al. (1991) Heterogeneity of the molecular basis of hereditary pyropoikilocytosis and hereditary elliptocytosis associated with increased levels of the spectrin alpha I/74-kilodalton tryptic peptide. Blood 78(5):1364-1372.
    • (1991) Blood , vol.78 , Issue.5 , pp. 1364-1372
    • Floyd, P.B.1
  • 20
    • 77951211996 scopus 로고    scopus 로고
    • A fused alpha-beta "mini-spectrin" mimics the intact erythrocyte spectrin head-to-head tetramer
    • Harper SL, Li D, Maksimova Y, Gallagher PG, Speicher DW (2010) A fused alpha-beta "mini-spectrin" mimics the intact erythrocyte spectrin head-to-head tetramer. J Biol Chem 285(14):11003-11012.
    • (2010) J Biol Chem , vol.285 , Issue.14 , pp. 11003-11012
    • Harper, S.L.1    Li, D.2    Maksimova, Y.3    Gallagher, P.G.4    Speicher, D.W.5
  • 21
    • 77956540295 scopus 로고    scopus 로고
    • A comprehensive model of the spectrin divalent tetramer binding region deduced using homology modeling and chemical cross-linking of a minispectrin
    • Li D, et al. (2010) A comprehensive model of the spectrin divalent tetramer binding region deduced using homology modeling and chemical cross-linking of a minispectrin. J Biol Chem 285(38):29535-29545.
    • (2010) J Biol Chem , vol.285 , Issue.38 , pp. 29535-29545
    • Li, D.1
  • 22
    • 77954699179 scopus 로고    scopus 로고
    • Crystal structure and functional interpretation of the erythrocyte spectrin tetramerization domain complex
    • Ipsaro JJ, et al. (2010) Crystal structure and functional interpretation of the erythrocyte spectrin tetramerization domain complex. Blood 115(23):4843-4852.
    • (2010) Blood , vol.115 , Issue.23 , pp. 4843-4852
    • Ipsaro, J.J.1
  • 23
    • 7444232111 scopus 로고    scopus 로고
    • Independent movement, dimerization and stability of tandem repeats of chicken brain alpha-spectrin
    • Kusunoki H, Minasov G, Macdonald RI, Mondragón A (2004) Independent movement, dimerization and stability of tandem repeats of chicken brain alpha-spectrin. J Mol Biol 344(2):495-511.
    • (2004) J Mol Biol , vol.344 , Issue.2 , pp. 495-511
    • Kusunoki, H.1    Minasov, G.2    Macdonald, R.I.3    Mondragón, A.4
  • 24
    • 0033588274 scopus 로고    scopus 로고
    • Structures of two repeats of spectrin suggest models of flexibility
    • Grum VL, Li D, MacDonald RI, Mondragón A (1999) Structures of two repeats of spectrin suggest models of flexibility. Cell 98(4):523-535.
    • (1999) Cell , vol.98 , Issue.4 , pp. 523-535
    • Grum, V.L.1    Li, D.2    Macdonald, R.I.3    Mondragón, A.4
  • 25
    • 1842450320 scopus 로고    scopus 로고
    • Structural insights into the stability and flexibility of unusual erythroid spectrin repeats
    • Kusunoki H, MacDonald RI, Mondragón A (2004) Structural insights into the stability and flexibility of unusual erythroid spectrin repeats. Structure 12(4):645-656.
    • (2004) Structure , vol.12 , Issue.4 , pp. 645-656
    • Kusunoki, H.1    Macdonald, R.I.2    Mondragón, A.3
  • 26
    • 43749107283 scopus 로고    scopus 로고
    • Comparative protein structure modeling using Modeller
    • Chapter 5:Unit 5.6
    • Eswar N, et al. (2006) Comparative protein structure modeling using Modeller. Curr Protoc Bioinformatics Chapter 5:Unit 5.6.
    • (2006) Curr Protoc Bioinformatics
    • Eswar, N.1
  • 27
    • 0033810049 scopus 로고    scopus 로고
    • Modeling of loops in protein structures
    • Fiser A, Do RK, Sali A (2000) Modeling of loops in protein structures. Protein Sci 9(9): 1753-1773.
    • (2000) Protein Sci , vol.9 , Issue.9 , pp. 1753-1773
    • Fiser, A.1    Do, R.K.2    Sali, A.3
  • 28
    • 0033873929 scopus 로고    scopus 로고
    • Comparative protein structure modeling of genes and genomes
    • Martí-Renom MA, et al. (2000) Comparative protein structure modeling of genes and genomes. Annu Rev Biophys Biomol Struct 29:291-325.
    • (2000) Annu Rev Biophys Biomol Struct , vol.29 , pp. 291-325
    • Martí-Renom, M.A.1
  • 29
    • 0027136282 scopus 로고
    • Comparative protein modelling by satisfaction of spatial restraints
    • Sali A, Blundell TL (1993) Comparative protein modelling by satisfaction of spatial restraints. J Mol Biol 234(3):779-815.
    • (1993) J Mol Biol , vol.234 , Issue.3 , pp. 779-815
    • Sali, A.1    Blundell, T.L.2
  • 30
    • 0034655949 scopus 로고    scopus 로고
    • The morph server: A standardized system for analyzing and visualizing macromolecular motions in a database framework
    • Krebs WG, Gerstein M (2000) The morph server: A standardized system for analyzing and visualizing macromolecular motions in a database framework. Nucleic Acids Res 28(8):1665-1675.
    • (2000) Nucleic Acids Res , vol.28 , Issue.8 , pp. 1665-1675
    • Krebs, W.G.1    Gerstein, M.2


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