Biological materials by design

Journal of Physics Condensed Matter

Volumn 26, Issue 7, 2014, Pages

  Qin, Zhao ^a   Dimas, Leon ^a   Adler, David ^a   Bratzel, Graham ^a   Buehler, Markus J ^a  

^a Massachusetts Institute of Technology   (United States)

Author keywords

bioinspired; experiment; materials; mechanical properties; simulation

Indexed keywords

BIOINSPIRED; EMPIRICAL TECHNIQUES; ENGINEERED MATERIALS; FUNDAMENTAL BUILDING BLOCKS; HIERARCHICAL MATERIALS; HIERARCHICAL STRUCTURING; MULTI-SCALE DESIGN; SIMULATION;

BIOLOGICAL MATERIALS; COMPUTATIONAL CHEMISTRY; COMPUTER SIMULATION; EXPERIMENTS; MATERIALS; MECHANICAL PROPERTIES; WOOD;

DESIGN;

MATERIALS; MECHANICAL PROPERTIES; WOOD;

PROTEIN;

BIOMIMETICS; BIOPHYSICS; CHEMISTRY; ENGINEERING; METHODOLOGY; PRINTING; REVIEW; WOOD;

BIOMIMETICS; BIOPHYSICAL PROCESSES; ENGINEERING; PRINTING; PROTEINS; WOOD;

EID: 84893423337     PISSN: 09538984     EISSN: 1361648X     Source Type: Journal    
DOI: 10.1088/0953-8984/26/7/073101     Document Type: Review

References (75)

1. Buehler M J and Ackbarow T 2007 Fracture mechanics of protein materials Mater. Today 10(9) 46-58 (Pubitemid 47223794)
2. Buehler M J and Yung Y C 2009 Deformation and failure of protein materials in physiologically extreme conditions and disease Nature Mater. 8 175-88
3. Buehler M J 2010 Tu(r)ning weakness to strength Nano Today 5 379-83
4. Cranford S W, Tarakanova A, Pugno N M and Buehler M J 2012 Nonlinear material behaviour of spider silk yields robust webs Nature 482 72-6
5. Gao H and Yao H 2006 Mechanics of robust and releasable adhesion in biology: bottom-up designed hierarchical structures of gecko J. Mech. Phys. Solids 54 1120-46
6. Qin Z and Buehler M J 2012 Cooperativity governs the size and structure of biological interfaces J. Biomech. 45 2778-83
7. Knowles T P J and Buehler M J 2011 Nanomechanics of functional and pathological amyloid materials Nature Nanotechnol. 6 469-79
8. Spivak D I, Giesa T, Wood E and Buehler M J 2011 Category theoretic analysis of hierarchical protein materials and social networks PLoS One 6 e23911
9. Gibson L J 2005 Biomechanics of cellular solids J. Biomech. 38 377-99 (Pubitemid 40126449)
10. Fratzl P and Weinkamer R 2007 Nature's hierarchical materials Prog. Mater. Sci. 52 1263-334 (Pubitemid 47374755)
11. Montero C, Clair B, Alméras T, Lee A V D and Gril J 2012 Relationship between wood elastic strain under bending and cellulose crystal strain Compos. Sci. Technol. 72 175-81
12. Speck T and Burgert I 2011 Plant stems: functional design and mechanics Annu. Rev. Mater. Res. 41 169-93
13. Booker R E and Sell J 1998 The nanostructure of the cell wall of softwoods and its functions in a living tree Holz als Roh- und Werkst. 56 1-8 (Pubitemid 128478777)
14. Burgert I 2006 Exploring the micromechanical design of plant cell walls Am. J. Bot. 93 1391-401 (Pubitemid 44654544)
15. Adler D C and Buehler M J 2013 Mesoscale mechanics of wood cell walls under axial strain Soft Matter 9 7138-44
16. Fratzl P, Burgert I and Keckes J 2004 Mechanical model for the deformation of the wood cell wall J. Mater. Res. 95 579-84
17. Altaner C M and Jarvis M C 2008 Modeling polymer interactions of the 'molecular Velcro' type in wood under mechanical stress J. Theor. Biol. 253 434-45
18. Keunecke D, Eder M, Burgert I and Niemz P 2008 Micromecanical properties of common yew (Taxus baccata) and Norway spruce (Picea abies) transition wood fibers subjected to longitudinal tension J. Wood Sci. 54 420-2
19. Fengel D and Wegener G 1989 Wood Chemistry, Ultrastructure, Reactions (Berlin: de Gruyter & Co.)
20. Kerstens S, Decraemer W F and Verbelen J-P 2001 Cell walls at the plant surface behave mechanically like fiber-reinforced composite materials Plant Physiol. 127 381-5 (Pubitemid 32996743)
21. Fratzl P, Burgert I and Gupta H S 2004 On the role of interface polymers for the mechanics of natural polymeric composites Phys. Chem. Chem. Phys. 6 5575-9 (Pubitemid 40070386)
22. Glass D C, Moritsugu K, Cheng X and Smith J C 2012 REACH coarse-grained simulation of a cellulose fiber Biomacromolecules 13 2634-44
23. Nishiyama Y 2009 Structure and properties of the cellulose microfibril J. Wood Sci. 55 241-9
24. Cabrera R Q, Meersman F, McMilan P F and Dmitriev V 2011 Nanomechanical and structural properties of native cellulose under compressive stress Biomacromolecules 12 2178-83
25. Flores E I, Neto E A and Pearce C 2011 A large strain computational multi-scale model for the dissipative behaviour of wood cell-wall Comput. Mater. Sci. 50 1202-11
26. Sen D and Buehler M J 2011 Structural hierarchies define toughness and defect-tolerance despite simple and mechanically inferior brittle building blocks Sci. Rep. 1 35
27. Dunlop J W C and Fratzl P 2010 Biological composites Annu. Rev. Mater. Res. 40 1-24
28. Sen D and Buehler M J 2010 Atomistically-informed mesoscale model of deformation and failure of bioinspired hierarchical silica nanocomposites Int. J. Appl. Mech. 2 699-717
29. Vagaská B, Bačáková L, Filová E and Balík K 2010 Osteogenic cells on bio-inspired materials for bone tissue engineering Physiol. Res. 59 309-22
30. Schmidt M, Gierlinger N, Schade U, Rogge T and Grunze M 2006 Polarized infrared microspectroscopy of single spruce fibers: hydrogen bonding in wood polymers Biopolymers 83 546-55 (Pubitemid 44851667)
31. Keckes J, Burgert I, Frühmann K, Müller M, Kölln K, Hamilton M, Burghammer M, Roth S V, Stanzl-Tschegg S and Fratzl P 2003 Cell-wall recovery after irreversible deformation of wood Nature Mater. 2 810-4
32. Barnett J R and Bonham V A 2003 Cellulose microfibril angle in the cell wall of wood fibres Biol. Rev. 79 461-72
33. Reiterer A, Lichtenegger H, Tschegg S and Fratzl P 1999 Experimental evidence for a mechanical function of the cellulose microfibril angle in wood cell walls Phil. Mag. 79 2173-84 (Pubitemid 129488684)
34. Bergander A and Salmén L 2002 Cell wall properties and their effects on the mechanical properties of fibers J. Mater. Sci. 37 151-6 (Pubitemid 34138284)
35. Burgert I, Eder M, Gierlinger N and Fratzl P 2007 Tensile and compressive stresses in tracheids are induced by swelling based on geometrical constraints of the wood cell Planta 226 981-7 (Pubitemid 47283089)
36. Lichtenegger H, Reiterer A, Stanzl-Tschegg S E and Fratzl P 1999 Variation of cellulose microfibril angles in softwoods and hardwoods - a possible strategy of mechanical optimization J. Struct. Biol. 128 257-69 (Pubitemid 30078394)
37. Fratzl P, Elbaum R and Burgert I 2008 Cellulose fibrils direct plant organ movements Farady Discuss. 139 275-82
38. Vandiver R and Goriely A 2008 Tissue tension and axial growth of cylindrical structures in plants and elastic tissues Europhys. Lett. 84 58004
39. Choi H S, Ho G, Joseph L and Mathias N 2012 Outrigger Design for High-Rise Buildings Chicago, CTBUH, in conjunction with IIT
40. Färber J, Lichtenegger H, Reiterer C, Stanzl-Tschegg S E and Fratzl P 2001 Cellulose microfibril angles in a spruce branch and mechanical implications J. Mater. Sci. 36 5087-92 (Pubitemid 33092917)
41. Krishnaji S T, Bratzel G H, Kinahan M E, Kluge J A, Staii C, Wong J Y, Buehler M J and Kaplan D L 2013 Sequence-structure-property relationships of recombinant spider silk proteins: integration of biopolymer design, processing, and modeling Adv. Funct. Mater. 23 241-53
42. Qin Z and Buehler M J 2013 Spider silk: webs measure up Nature Mater. 12 185-7
43. Bratzel G and Buehler M J 2012 Sequence-structure correlations in silk: poly-ala repeat of N. clavipes MaSp1 is naturally optimized at a critical length scale J. Mech. Behav. Biomed. Mater. 7 30-40
44. Qin Z and Buehler M J 2010 Cooperative deformation of hydrogen bonds in beta-strands and beta-sheet nanocrystals Phys. Rev. E 82 061906
45. Tsemekhman K, Goldschmidt L, Eisenberg D and Baker D 2007 Cooperative hydrogen bonding in amyloid formation Protein Sci. 16 761-4 (Pubitemid 46507005)
46. Qin Z, Fabre A and Buehler M J 2013 Structure and mechanism of maximum stability of isolated alpha-helical protein domains at a critical length scale Eur. Phys. J. E 36 53
47. Qin Z and Buehler M J 2010 Molecular dynamics simulation of the alpha-helix to beta-sheet transition in coiled protein filaments: evidence for a critical filament length scale Phys. Rev. Lett. 104 198304
48. Mochizuki K, Matsumoto M and Ohmine I 2013 Defect pair separation as the controlling step in homogeneous ice melting Nature 498 350-4
49. Qin Z and Buehler M J 2012 Carbon dioxide enhances fragility of ice crystals J. Phys. D: Appl. Phys. 45 445302
50. Weaver J C et al 2012 The stomatopod dactyl club: a formidable damage-tolerant biological hammer Science 336 1275-80
51. Qin Z and Buehler M J 2013 Impact tolerance in mussel thread networks by heterogeneous material distribution Nature Commun. 4 2187
52. Mayya A, Banerjee A and Rajesh R 2013 Mammalian cortical bone in tension is non-Haversian Sci. Rep. 3 2533
53. Nair A K, Gautieri A, Chang S W and Buehler M J 2013 Molecular mechanics of mineralized collagen fibrils in bone Nature Commun. 4 1724
54. Buehler M J 2006 Nature designs tough collagen: explaining the nanostructure of collagen fibrils Proc. Natl Acad. Sci. USA 103 12285-90 (Pubitemid 44267251)
55. Qin Z, Gautieri A, Nair A K, Inbar H and Buehler M J 2012 Thickness of hydroxyapatite nanocrystal controls mechanical properties of the collagen-hydroxyapatite interface Langmuir 28 1982-92
56. Dimas L S, Bratzel G H, Eylon I and Buehler M J 2013 Tough composites inspired by mineralized natural materials: computation, 3D printing, and testing Adv. Funct. Mater. at press
57. Kis A, Csányi G, Salvetat J-P, Lee T-N, Couteau E, Kulik A J, Benoit W, Brugger J and Forró L 2004 Reinforcement of single-walled carbon nanotube bundles by intertube bridging Nature Mater. 3 153-7
58. Nair A K, Qin Z and Buehler M J 2012 Cooperative deformation of carboxyl groups in functionalized carbon nanotubes Int. J. Solids Struct. 49 2418-23
59. Chen J, Liu H Y, Weimer W A, Halls M D, Waldeck D H and Walker G C 2002 Noncovalent engineering of carbon nanotube surfaces by rigid, functional conjugated polymers J. Am. Chem. Soc. 124 9034-5 (Pubitemid 34847648)
60. Peng H S, Jain M, Li Q W, Peterson D E, Zhu Y T and Jia Q X 2008 Vertically aligned pearl-like carbon nanotube arrays for fiber spinning J. Am. Chem. Soc. 130 1130-1 (Pubitemid 351170979)
61. Jacobs C B, Vickrey T L and Venton B J 2011 Functional groups modulate the sensitivity and electron transfer kinetics of neurochemicals at carbon nanotube modified microelectrodes Analyst 136 3557-65
62. Bratzel G H, Cranford S W, Espinosa H and Buehler M J 2010 Bioinspired noncovalently crosslinked 'fuzzy' carbon nanotube bundles with superior toughness and strength J. Mater. Chem. 20 10465-74
63. Naraghi M, Bratzel G H, Filleter T, An Z, Wei X, Nguyen S T, Buehler M J and Espinosa H D 2013 Atomistic investigation of load transfer between DWNT bundles 'crosslinked' by PMMA oligomers Adv. Funct. Mater. 23 1883-92
64. Wong J, Spivak D, McDonald J, Kaplan D and Buehler M J 2012 Materials by design: merging proteins and music Nano Today 7 488-95
65. Dimitrov D, Schreve K and de Beer N 2006 Advances in three-dimensional printing - state of the art and future perspectives Rapid Prototyping J. 12 136-47 (Pubitemid 43883174)
66. Lam C X F, Mo X M, Teoh S H and Hutmacher D W 2002 Scaffold development using 3D printing with a starch-based polymer Mater. Sci. Eng. C 20 49-56 (Pubitemid 34718477)
67. Leong K F, Cheah C M and Chua C K 2003 Solid freeform fabrication of three-dimensional scaffolds for engineering replacement tissues and organs Biomaterials 24 2363-78 (Pubitemid 36434056)
68. Miller B W, Moore J W, Barrett H H, Frye T, Adler S, Sery J and Furenlid L R 2011 3D printing in x-ray and gamma-ray imaging: a novel method for fabricating high-density imaging apertures Nucl. Instrum. Methods Phys. Res. A 659 262-8
69. Roth E A, Xu T, Das M, Gregory C, Hickman J J and Boland T 2004 Inkjet printing for high-throughput cell patterning Biomaterials 25 3707-15 (Pubitemid 38327059)
70. Seitz H, Rieder W, Irsen S, Leukers B and Tille C 2005 Three-dimensional printing of porous ceramic scaffolds for bone tissue engineering J. Biomed. Mater. Res. B 74B 782-8 (Pubitemid 41076949)
71. Gao H J, Ji B H, Jager I L, Arzt E and Fratzl P 2003 Materials become insensitive to flaws at nanoscale: lessons from nature Proc. Natl Acad. Sci. USA 100 5597-600 (Pubitemid 36576853)
72. Omenetto F G and Kaplan D L 2010 New opportunities for an ancient material Science 329 528-31
73. Kim D H, Ahn J H, Choi W M, Kim H S, Kim T H, Song J Z, Huang Y G Y, Liu Z J, Lu C and Rogers J A 2008 Stretchable and foldable silicon integrated circuits Science 320 507-11 (Pubitemid 351590659)
74. Ruiz L, VonAchen P, Lazzara T D, Xu T and Keten S 2013 Persistence length and stochastic fragmentation of supramolecular nanotubes under mechanical force Nanotechnology 24 195103
75. Bratzel G H and Bueler M J 2012 Molecular mechanics of silk nanostructures under varied mechanical loading Biopolymers 97 408-17