메뉴 건너뛰기




Volumn 161, Issue 1, 2014, Pages 15-20

Identification of differentially expressed genes in the digestive gland of manila clam Ruditapes philippinarum exposed to BDE-47

Author keywords

2,2 ,4,4 Tetrabromodiphenyl ether; Differentially expressed genes; Ruditapes philippinarum; Suppression subtractive hybridization

Indexed keywords

BROMINE DERIVATIVE; DOPAMINE BETA MONOOXYGENASE; ETHER DERIVATIVE; HEAT SHOCK PROTEIN 70; PROTEOCHONDROITIN SULFATE; TISSUE EXTRACT;

EID: 84893179939     PISSN: 15320456     EISSN: 18781659     Source Type: Journal    
DOI: 10.1016/j.cbpc.2013.12.004     Document Type: Article
Times cited : (17)

References (45)
  • 1
    • 33646228844 scopus 로고    scopus 로고
    • Preliminary study of responses in mussel (Mytilus edulis) exposed to bisphenol A, diallyl phthalate and tetrabromo diphenyl ether
    • N. Aarab, S. Lemaire-Gony, E. Unruh, P.D. Hansen, B.K. Larsen, O.K. Andersen, and J.F. Narbonne Preliminary study of responses in mussel (Mytilus edulis) exposed to bisphenol A, diallyl phthalate and tetrabromo diphenyl ether Aquat. Toxicol. 78S 2006 S86 S92
    • (2006) Aquat. Toxicol. , vol.78 S
    • Aarab, N.1    Lemaire-Gony, S.2    Unruh, E.3    Hansen, P.D.4    Larsen, B.K.5    Andersen, O.K.6    Narbonne, J.F.7
  • 3
    • 33746308468 scopus 로고    scopus 로고
    • Identification of proteomic signatures of exposure to marine pollutants in mussels (Mytilus edulis)
    • DOI 10.1074/mcp.M500333-MCP200
    • I. Apraiz, J. Mi, and S. Cristobal Identification of proteomic signatures of exposure to marine pollutants in mussels (Mytilus edulis) Mol. Cell Proteomics 5 2006 1274 1285 (Pubitemid 44103398)
    • (2006) Molecular and Cellular Proteomics , vol.5 , Issue.7 , pp. 1274-1285
    • Apraiz, I.1    Mi, J.2    Cristobal, S.3
  • 4
    • 33748030109 scopus 로고    scopus 로고
    • Induction of micronuclei and other nuclear abnormalities in mussels exposed to bisphenol A, diallyl phthalate and tetrabromodiphenyl ether-47
    • J. Baršienë, J. Šyvokienë, and A. Bjornstad Induction of micronuclei and other nuclear abnormalities in mussels exposed to bisphenol A, diallyl phthalate and tetrabromodiphenyl ether-47 Aquat. Toxicol. 78 2006 105 108
    • (2006) Aquat. Toxicol. , vol.78 , pp. 105-108
    • Baršienë, J.1    Šyvokienë, J.2    Bjornstad, A.3
  • 6
    • 1642359206 scopus 로고    scopus 로고
    • Response of the Pacific oyster Crassostrea gigas to hydrocarbon contamination under experimental conditions
    • DOI 10.1016/j.gene.2003.12.027, PII S037811190400006X
    • I. Boutet, A. Tanguy, and D. Moraga Response of the Pacific oyster Crassostrea gigas to hydrocarbon contamination under experimental conditions Gene 329 2004 147 157 (Pubitemid 38366503)
    • (2004) Gene , vol.329 , Issue.1-2 , pp. 147-157
    • Boutet, I.1    Tanguy, A.2    Moraga, D.3
  • 7
    • 0036644582 scopus 로고    scopus 로고
    • Cyclophilins: Unexpected messengers in intercellular communications
    • DOI 10.1016/S1471-4906(02)02237-8, PII S1471490602022378
    • M.I. Bukrinsky Cyclophilins: unexpected messengers in intercellular communications Trends Immunol. 23 2002 323 325 (Pubitemid 34717897)
    • (2002) Trends in Immunology , vol.23 , Issue.7 , pp. 323-325
    • Bukrinsky, M.I.1
  • 8
    • 79952830765 scopus 로고    scopus 로고
    • A promising therapeutic and diagnostic tumor target
    • M. Capello, S. Ferri-Borgogno, P. Cappello, and F. Novelli A promising therapeutic and diagnostic tumor target FEBS J. 278 2011 1064 1074
    • (2011) FEBS J. , vol.278 , pp. 1064-1074
    • Capello, M.1    Ferri-Borgogno, S.2    Cappello, P.3    Novelli, F.4
  • 9
    • 81255127645 scopus 로고    scopus 로고
    • Molecular cloning and characterization of two isoforms of cyclophilin A gene from Venerupis philippinarum
    • L. Chen, C. Mu, J. Zhao, and C. Wang Molecular cloning and characterization of two isoforms of cyclophilin A gene from Venerupis philippinarum Fish Shellfish Immunol. 31 2011 1218 1223
    • (2011) Fish Shellfish Immunol. , vol.31 , pp. 1218-1223
    • Chen, L.1    Mu, C.2    Zhao, J.3    Wang, C.4
  • 10
    • 0036160052 scopus 로고    scopus 로고
    • Heat shock factor 1 and heat shock proteins: Critical partners in protection against acute cell injury
    • E.S. Christians, L.J. Yan, and I.J. Benjamin Heat shock factor 1 and heat shock proteins: critical partners in protection against acute cell injury Crit. Care Med. 30 2002 S43 S50
    • (2002) Crit. Care Med. , vol.30
    • Christians, E.S.1    Yan, L.J.2    Benjamin, I.J.3
  • 12
    • 27644587818 scopus 로고    scopus 로고
    • Response of the Pacific oyster Crassostrea gigas to hypoxia exposure under experimental conditions
    • DOI 10.1111/j.1742-4658.2005.04960.x
    • E. David, A. Tanguy, K. Pichavant, and D. Moraga Response of the Pacific oyster Crassostrea gigas to hypoxia exposure under experimental conditions FEBS J. 272 2005 5635 5652 (Pubitemid 41579422)
    • (2005) FEBS Journal , vol.272 , Issue.21 , pp. 5635-5652
    • David, E.1    Tanguy, A.2    Pichavant, K.3    Moraga, D.4
  • 13
    • 0027477757 scopus 로고
    • Toxicological and pathological applications of proliferating cell nuclear antigen (PCNA), a novel endogenous marker for cell proliferation
    • D.R. Dietrich Toxicological and pathological applications of proliferating cell nuclear antigen (PCNA), a novel endogenous marker for cell proliferation Crit. Rev. Toxicol. 23 1993 77 109 (Pubitemid 23094395)
    • (1993) Critical Reviews in Toxicology , vol.23 , Issue.1 , pp. 77-109
    • Dietrich, D.R.1
  • 15
    • 78651359439 scopus 로고    scopus 로고
    • Systems biology: Leading the revolution in ecotoxicology
    • N. Garcia-Reyero, and E.J. Perkins Systems biology: leading the revolution in ecotoxicology Environ. Toxicol. Chem. 30 2011 265 273
    • (2011) Environ. Toxicol. Chem. , vol.30 , pp. 265-273
    • Garcia-Reyero, N.1    Perkins, E.J.2
  • 16
    • 80155210248 scopus 로고    scopus 로고
    • Physiological and biochemical changes during premetamorphic development in American oyster Crassostrea virginica in relation to mortality emergence
    • B. Genard, F. Pernet, K. Lemarchand, P. Boudry, D. Moraga, and R. Tremblay Physiological and biochemical changes during premetamorphic development in American oyster Crassostrea virginica in relation to mortality emergence Aquat. Living Resour. 24 2011 247 260
    • (2011) Aquat. Living Resour. , vol.24 , pp. 247-260
    • Genard, B.1    Pernet, F.2    Lemarchand, K.3    Boudry, P.4    Moraga, D.5    Tremblay, R.6
  • 17
    • 84859755231 scopus 로고    scopus 로고
    • Expression of candidate genes related to metabolism, immunity and cellular stress during massive mortality in the American oyster Crassostrea virginica larvae in relation to biochemical sand physiological parameters
    • B. Genard, D. Moraga, F. Pernet, É. David, P. Boudry, and R. Tremblay Expression of candidate genes related to metabolism, immunity and cellular stress during massive mortality in the American oyster Crassostrea virginica larvae in relation to biochemical sand physiological parameters Gene 499 2012 70 75
    • (2012) Gene , vol.499 , pp. 70-75
    • Genard, B.1    Moraga, D.2    Pernet, F.3    David, É.4    Boudry, P.5    Tremblay, R.6
  • 18
    • 84881630564 scopus 로고    scopus 로고
    • Proteomic and metabolomic analysis reveal gender-specific responses of mussel Mytilus galloprovincialis to 2,2,4,4-tetrabromodiphenyl ether (BDE 47)
    • 10.1016/j.aquatox.2013.07.009
    • C. Ji, H. Wu, L. Wei, J. Zhao, and J. Yu Proteomic and metabolomic analysis reveal gender-specific responses of mussel Mytilus galloprovincialis to 2,2,4,4-tetrabromodiphenyl ether (BDE 47) Aquat. Toxicol 2013 10.1016/j.aquatox.2013.07.009
    • (2013) Aquat. Toxicol
    • Ji, C.1    Wu, H.2    Wei, L.3    Zhao, J.4    Yu, J.5
  • 19
    • 84872856823 scopus 로고    scopus 로고
    • Differential gene expression profile of the calanoid copepod, Pseudodiaptomus annandalei, in response to nickel exposure
    • J. Jiang, G. Wang, M. Mao, K. Wang, S. Li, and C. Zeng Differential gene expression profile of the calanoid copepod, Pseudodiaptomus annandalei, in response to nickel exposure Comp. Biochem. Physiol. C 157 2013 203 211
    • (2013) Comp. Biochem. Physiol. C , vol.157 , pp. 203-211
    • Jiang, J.1    Wang, G.2    Mao, M.3    Wang, K.4    Li, S.5    Zeng, C.6
  • 20
    • 50949128129 scopus 로고    scopus 로고
    • Gender specific proteomic responses in zebrafish liver following exposure to a selected mixture of brominated flame retardants
    • P. Kling, A. Norman, P.L. Andersson, L. Norrgren, and L. Förlin Gender specific proteomic responses in zebrafish liver following exposure to a selected mixture of brominated flame retardants Ecotoxicol. Environ. Saf. 71 2008 319 327
    • (2008) Ecotoxicol. Environ. Saf. , vol.71 , pp. 319-327
    • Kling, P.1    Norman, A.2    Andersson, P.L.3    Norrgren, L.4    Förlin, L.5
  • 21
    • 77954542888 scopus 로고    scopus 로고
    • The first molluscan TCTP in Venerupis philippinarum: Molecular cloning and expression analysis
    • C. Li, L. Qiu, X. Ning, A. Chen, S. Qin, H. Wu, and J. Zhao The first molluscan TCTP in Venerupis philippinarum: molecular cloning and expression analysis Fish Shellfish Immunol. 29 2012 530 533
    • (2012) Fish Shellfish Immunol. , vol.29 , pp. 530-533
    • Li, C.1    Qiu, L.2    Ning, X.3    Chen, A.4    Qin, S.5    Wu, H.6    Zhao, J.7
  • 22
    • 0035710746 scopus 로고    scopus 로고
    • -ΔΔCT method
    • DOI 10.1006/meth.2001.1262
    • K.J. Livak, and T.D. Schmittgen Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method Methods 25 2001 402 408 (Pubitemid 34164012)
    • (2001) Methods , vol.25 , Issue.4 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 23
    • 0002885175 scopus 로고
    • Persistent pollutants in marine invertebrates
    • C.H. Walker, D.R. Livingstone, Pergamon Oxfordm, UK
    • D.R. Livingstone Persistent pollutants in marine invertebrates C.H. Walker, D.R. Livingstone, Persistent Pollutants in Marine Ecosystems 1992 Pergamon Oxfordm, UK 3 34
    • (1992) Persistent Pollutants in Marine Ecosystems , pp. 3-34
    • Livingstone, D.R.1
  • 24
    • 0041885325 scopus 로고    scopus 로고
    • Proliferating cell nuclear antigen (PCNA): A dancer with many partners
    • DOI 10.1242/jcs.00653
    • G. Maga, and U. Hübscher Proliferating cell nuclear antigen (PCNA): a dancer with many parters J. Cell Sci. 116 2003 3051 3060 (Pubitemid 37038954)
    • (2003) Journal of Cell Science , vol.116 , Issue.15 , pp. 3051-3060
    • Maga, G.1    Hubscher, U.2
  • 25
    • 79953860193 scopus 로고    scopus 로고
    • Assessment of cellular and functional biomarkers in bivalves exposed to ecologically relevant abiotic stressors
    • J.J. Matos, J. Andrzejewski, and L. Briggs Assessment of cellular and functional biomarkers in bivalves exposed to ecologically relevant abiotic stressors J. Aquat. Anim. Health 21 2009 104 116
    • (2009) J. Aquat. Anim. Health , vol.21 , pp. 104-116
    • Matos, J.J.1    Andrzejewski, J.2    Briggs, L.3
  • 26
    • 36749044848 scopus 로고    scopus 로고
    • Identification of differentially expressed genes of the Pacific oyster Crassostrea gigas exposed to prolonged thermal stress
    • A. Meistertzheim, A. Tanguy, and D. Moraga Identification of differentially expressed genes of the Pacific oyster Crassostrea gigas exposed to prolonged thermal stress FEBS J. 274 2007 1 11
    • (2007) FEBS J. , vol.274 , pp. 1-11
    • Meistertzheim, A.1    Tanguy, A.2    Moraga, D.3
  • 27
    • 34547858913 scopus 로고    scopus 로고
    • Structure and acetyl-lysine recognition of the bromodomain
    • DOI 10.1038/sj.onc.1210618, PII 1210618
    • S. Mujtaba, L. Zeng, and M.-M. Zhou Structure and acetyl-lysine recognition of the bromodomain Oncogene 26 2007 5521 5527 (Pubitemid 47255932)
    • (2007) Oncogene , vol.26 , Issue.37 , pp. 5521-5527
    • Mujtaba, S.1    Zeng, L.2    Zhou, M.-M.3
  • 28
    • 84858286429 scopus 로고    scopus 로고
    • Cyto-genotoxic effects induced by three brominated diphenyl ether congeners on the freshwater mussel Dreissena polymorpha
    • M. Parolini, and A. Binelli Cyto-genotoxic effects induced by three brominated diphenyl ether congeners on the freshwater mussel Dreissena polymorpha Ecotoxicol. Environ. Saf. 79 2012 247 255
    • (2012) Ecotoxicol. Environ. Saf. , vol.79 , pp. 247-255
    • Parolini, M.1    Binelli, A.2
  • 29
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • M.W. Pfaffl A new mathematical model for relative quantification in real-time RT-PCR Nucleic Acids Res. 29 2001 2001 2007
    • (2001) Nucleic Acids Res. , vol.29 , pp. 2001-2007
    • Pfaffl, M.W.1
  • 30
    • 1842483281 scopus 로고    scopus 로고
    • Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - Excel-based tool using pair-wise correlations
    • DOI 10.1023/B:BILE.0000019559.84305.47
    • M.W. Pfaffl, A. Tichopad, C. Prgomet, and T.P. Neuvians Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper-Excel-based tool using pair-wise correlations Biotechnol. Lett. 26 2004 509 515 (Pubitemid 38448421)
    • (2004) Biotechnology Letters , vol.26 , Issue.6 , pp. 509-515
    • Pfaffl, M.W.1    Tichopad, A.2    Prgomet, C.3    Neuvians, T.P.4
  • 31
    • 37349046678 scopus 로고    scopus 로고
    • Evaluation of DNA damage induced by decabromodiphenyl ether (BDE-209) in hemocytes of Dreissena polymorpha using the comet and micronucleus assays
    • DOI 10.1002/em.20353
    • C. Riva, A. Binelli, D. Cogni, and A. Provini Evaluation of DNA damages induced by BDE-209 in haemocytes of Dreissena polymorpha using SCG Eassay and MN test Environ. Mol. Mutagen. 48 2007 735 743 (Pubitemid 350305010)
    • (2007) Environmental and Molecular Mutagenesis , vol.48 , Issue.9 , pp. 735-743
    • Riva, C.1    Binelli, A.2    Cogni, D.3    Provini, A.4
  • 32
    • 80053261618 scopus 로고    scopus 로고
    • Big defensins, a diverse family of antimicrobial peptides that follows different patterns of expression in hemocytes of the oyster Crassostrea gigas
    • R.D. Rosa, A. Santini, J. Fievet, P. Bulet, and D. Destoumieux- Garzón et al. Big defensins, a diverse family of antimicrobial peptides that follows different patterns of expression in hemocytes of the oyster Crassostrea gigas PLoS ONE 6 9 2011 e25594
    • (2011) PLoS ONE , vol.6 , Issue.9 , pp. 25594
    • Rosa, R.D.1    Santini, A.2    Fievet, J.3    Bulet, P.4    Destoumieux-Garzón, D.5
  • 34
    • 85053290947 scopus 로고
    • Biochemistry and molecular biology of monooxygenase: Current perspective on forms, functions, and regulation of cytochrome P450 in aquatic species
    • D.C. Malins, G.K. Ostrander, Lewis Publishers, CRC Press Boca Raton
    • J.J. Stegeman, and M.E. Hahn Biochemistry and molecular biology of monooxygenase: current perspective on forms, functions, and regulation of cytochrome P450 in aquatic species D.C. Malins, G.K. Ostrander, Aquatic Toxicology; Molecular, Biochemical and Cellular Perspectives 1994 Lewis Publishers, CRC Press Boca Raton 87 206
    • (1994) Aquatic Toxicology; Molecular, Biochemical and Cellular Perspectives , pp. 87-206
    • Stegeman, J.J.1    Hahn, M.E.2
  • 36
    • 12544253695 scopus 로고    scopus 로고
    • Molecular identification and expression study of differentially regulated genes in the Pacific oyster Crassostrea gigas in response to pesticide exposure
    • A. Tanguy, I. Boutet, J. Laroche, and D. Moraga Molecular identification and expression study of differentially regulated genes in the Pacific oyster Crassostrea gigas in response to pesticide exposure FEBS J. 272 2005 390 403
    • (2005) FEBS J. , vol.272 , pp. 390-403
    • Tanguy, A.1    Boutet, I.2    Laroche, J.3    Moraga, D.4
  • 37
    • 84873112608 scopus 로고    scopus 로고
    • Identification of genes differentially expressed in clams Ruditapes philippinarum in response to endosulfan after different exposure time
    • Y. Tao, L. Pan, H. Zhang, and N. Liu Identification of genes differentially expressed in clams Ruditapes philippinarum in response to endosulfan after different exposure time Ecotoxicol. Environ. Saf. 89 2013 108 116
    • (2013) Ecotoxicol. Environ. Saf. , vol.89 , pp. 108-116
    • Tao, Y.1    Pan, L.2    Zhang, H.3    Liu, N.4
  • 38
    • 78649482148 scopus 로고    scopus 로고
    • Bioaccumulation and distribution of polybrominated diphenyl ethers in marine species from Bohai Bay, China
    • S. Tian, L. Zhu, and M. Liu Bioaccumulation and distribution of polybrominated diphenyl ethers in marine species from Bohai Bay, China Environ. Toxicol. Chem. 29 2010 2278 2285
    • (2010) Environ. Toxicol. Chem. , vol.29 , pp. 2278-2285
    • Tian, S.1    Zhu, L.2    Liu, M.3
  • 40
    • 58949099334 scopus 로고    scopus 로고
    • Congener specific distributions of polybrominated diphenyl ethers (PBDEs) in sediment and mussel (Mytilus edulis) of the Bo Sea, China
    • Z. Wang, X. Ma, Z. Lin, G. Na, and Z. Yao Congener specific distributions of polybrominated diphenyl ethers (PBDEs) in sediment and mussel (Mytilus edulis) of the Bo Sea, China Chemosphere 74 2009 896 901
    • (2009) Chemosphere , vol.74 , pp. 896-901
    • Wang, Z.1    Ma, X.2    Lin, Z.3    Na, G.4    Yao, Z.5
  • 41
    • 12344249914 scopus 로고    scopus 로고
    • Brominated flame retardants: Activities in a crustacean development test and in an ecdysteroid screening assay
    • DOI 10.1897/03-629.1
    • L. Wollenberger, L. Dinan, and M. Breitholtz Brominated flame retardants: activities in a crustacean development test and in an ecdysteroid screening assay Environ. Toxicol. Chem. 24 2005 400 407 (Pubitemid 40136592)
    • (2005) Environmental Toxicology and Chemistry , vol.24 , Issue.2 , pp. 400-407
    • Wollenberger, L.1    Dinan, L.2    Breitholtz, M.3
  • 42
    • 84968379498 scopus 로고    scopus 로고
    • Effects of tetrabromodiphenyl ether (BDE-47) on metabolic enzymes and DNA damages in tissues of Ruditapes philippinarum
    • C. Xu, L. Pan, and L. Wang Effects of tetrabromodiphenyl ether (BDE-47) on metabolic enzymes and DNA damages in tissues of Ruditapes philippinarum Mar. Environ. Sci. 30 2011 653 658
    • (2011) Mar. Environ. Sci. , vol.30 , pp. 653-658
    • Xu, C.1    Pan, L.2    Wang, L.3
  • 43
    • 84862692310 scopus 로고    scopus 로고
    • Toxic effect on tissues and differentially expressed genes in hepatopancreas identified by suppression subtractive hybridization of freshwater pearl mussel (Hyriopsis cumingii) following microcystin-LR challenge
    • Z. Yang, H. Wu, and Y. Li Toxic effect on tissues and differentially expressed genes in hepatopancreas identified by suppression subtractive hybridization of freshwater pearl mussel (Hyriopsis cumingii) following microcystin-LR challenge Environ. Toxicol. 27 2010 393 403
    • (2010) Environ. Toxicol. , vol.27 , pp. 393-403
    • Yang, Z.1    Wu, H.2    Li, Y.3
  • 44
    • 84878344750 scopus 로고    scopus 로고
    • Identification and expression of differentially expressed genes in clam Venerupis philippinarum in response to environmental pollutant hexabromocyclododecane (HBCD)
    • H. Zhang, L. Pan, Y. Tao, S. Tian, and Y. Hu Identification and expression of differentially expressed genes in clam Venerupis philippinarum in response to environmental pollutant hexabromocyclododecane (HBCD) J. Exp. Mar. Biol. Ecol. 445 2013 166 173
    • (2013) J. Exp. Mar. Biol. Ecol. , vol.445 , pp. 166-173
    • Zhang, H.1    Pan, L.2    Tao, Y.3    Tian, S.4    Hu, Y.5
  • 45
    • 78650690614 scopus 로고    scopus 로고
    • A dopamine beta hydroxylase from Chlamys farreri and its induced mRNA expression in the haemocytes after LPS stimulation
    • Z. Zhou, L. Wang, J. Yang, H. Zhang, P. Kong, M. Wang, L. Qiu, and L. Song A dopamine beta hydroxylase from Chlamys farreri and its induced mRNA expression in the haemocytes after LPS stimulation Fish Shellfish Immunol. 30 2011 154 162
    • (2011) Fish Shellfish Immunol. , vol.30 , pp. 154-162
    • Zhou, Z.1    Wang, L.2    Yang, J.3    Zhang, H.4    Kong, P.5    Wang, M.6    Qiu, L.7    Song, L.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.