Nitrogen depletion and small R3-MYB transcription factors affecting anthocyanin accumulation in Arabidopsis leaves

Phytochemistry

Volumn 98, Issue , 2014, Pages 34-40

  Nemie Feyissa, Dugassa ^a   Olafsdottir, Solveig Margret ^a   Heidari, Behzad ^a   Lillo, Cathrine ^a  

^a UNIVERSITY OF STAVANGER   (Norway)

Author keywords

Anthocyanins; Arabidopsis; bHLH; CPC; CPL3; ETC3 DFR; GL3; MYBL2; Nitrogen deficiency

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA;

ANTHOCYANIN; NITROGEN; TRANSCRIPTION FACTOR;

ARABIDOPSIS; CHEMISTRY; GENETICS; METABOLISM; PLANT LEAF;

ANTHOCYANINS; ARABIDOPSIS; NITROGEN; PLANT LEAVES; TRANSCRIPTION FACTORS;

EID: 84892927426     PISSN: 00319422     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.phytochem.2013.12.006     Document Type: Article

References (42)

1. J.M. Alonso, A.N. Stepanova, T.J. Leisse, C.J. Kim, H. Chen, P. Shinn, D.K. Stevenson, J. Zimmerman, P. Barajas, R. Cheuk, C. Gadrinab, C. Heller, A. Jeske, E. Koesema, C.C. Meyers, H. Parker, L. Prednis, Y. Ansari, N. Choy, H. Deen, M. Geralt, N. Hazari, E. Hom, M. Karnes, C. Mulholland, R. Ndubaku, I. Schmidt, P. Guzman, L. Aguilar-Henonin, M. Schmid, D. Weigel, D.E. Carter, T. Marchand, E. Risseeuw, D. Brogden, A. Zeko, W.J. Crosby, C.C. Berry, and J.R. Ecker Genome-wide insertional mutagenesis of Arabidopsis thaliana Science 301 2003 653 657 (Pubitemid 36927950)
2. X.-H. An, Y. Tian, K.-Q. Chen, X.-F. Wang, and Y.-J. Hao The apple WD40 protein MdTTG1 interacts with bHLH but not MYB proteins to regulate anthocyanin accumulation J. Plant Physiol. 169 2012 710 717
3. C. Bernhardt, M.M. Lee, A. Gonzalez, F. Zhang, A. Lloyd, and J. Schiefelbein The bHLH genes GLABRA3 (GL3) and ENHANCER OF GLABRA3 (EGL3) specify epidermal cell fate in the Arabidopsis root Development 130 2003 6431 6439 (Pubitemid 38088844)
4. D. Bouyer, F. Geier, F. Kragler, A. Schnittger, M. Pesch, K. Wester, R. Balkunde, J. Timmer, C. Fleck, and M. Hülskamp Two-dimensional patterning by a trapping/depletion mechanism: the role of TTG1 and GL3 in Arabidopsis trichome formation PLoS Biol. 6 2008 e141
5. R.A. Dixon, and G.M. Pasinetti Flavonoids and isoflavonoids: from plant biology to agriculture and neuroscience Plant Physiol. 154 2010 453 457
6. C. Dubos, J.L. Gourrierec, A. Baudry, G. Huep, E. Lanet, I. Debeaujon, J.-M. Routaboul, A. Alboresi, B. Weisshaar, and L. Lepiniec MYBL2 is a new regulator of flavonoid biosynthesis in Arabidopsis thaliana Plant J. 55 2008 940 953
7. C. Dubos, R. Stracke, E. Grotewold, B. Weisshaar, C. Martin, and L. Lepiniec MYB transcription factors in Arabidopsis Trends Plant Sci. 15 2010 573 581
8. D.N. Feyissa, T. Løvdal, K.M. Olsen, R. Slimestad, and C. Lillo The endogenous GL3, but not EGL3 gene is necessary for anthocyanin accumulation as induced by nitrogen depletion in Arabidopsis rosette stage leaves Planta 230 2009 747 754
9. L. Gan, K. Xia, J.-G. Chen, and S. Wang Functional characterization of TRICHOMELESS2, a new single-repeat R3 MYB of transcription factors in the regulation of trichome patterning in Arabidopsis BMC Plant Biol. 11 2011 10.1186/1471-2229-10-102-176
10. A. Gonzalez, M. Zhao, J.M. Leavitt, and A.M. Lloyd Regulation of the anthocyanin biosynthetic pathway by the TTG1/bHLH/Myb transcriptional complex in Arabidopsis seedlings Plant J. 53 2008 814 827 (Pubitemid 351495869)
11. A. Gonzalez, J. Mendenhall, Y. Huo, and A. Lloyd TTG1 complex MYBs, MYB5 and TT2, control outer seed coat differentiation Dev. Biol. 325 2009 412 421
12. K.S. Gould, and C. Lister Flavonoid functions in plants O.M. Andersen, K.R. Markham, Flavonoids: Chemistry, Biochemistry and Applications 2006 CRC Press 397 441 (9780849320217)
13. M. Grebe The patterning of epidermal hairs in Arabidopsis - updated Curr. Opin. Plant Biol. 15 2012 31 37
14. D.R. Hoagland, and D.I. Arnon The water-culture method for growing plants without soil Calif. Agric. Exp. Stn. Circ. 347 1950
15. M. Hülskamp, S. Misera, and G. Jürgens Genetic dissection of trichome cell development in Arabidopsis Cell 76 1994 555 566 (Pubitemid 24064175)
16. T. Ishida, T. Kurata, K. Okada, and T. Wada A genetic regulatory network in the development of trichomes and root hairs Annu. Rev. Plant Biol. 59 2008 365 386 (Pubitemid 351813035)
17. G. Krouk, N.M. Crawford, G.M. Coruzzi, and Y.-F. Tsay Nitrate signaling: adaptation to fluctuating environments Curr. Opin. Plant Biol. 13 2010 266 273
18. H. Kubo, A.J.M. Peeters, M.G.M. Aarts, A. Pereira, and M. Koornneef ANTHOCYANINLESS2, a homeobox gene affecting anthocyanin distribution and root development in Arabidopsis Plant Cell 11 1999 1217 1226
19. R. Larbat, K.M. Olsen, R. Slimestad, T. Løvdal, C. Bénard, M. Verheul, F. Bourgaud, C. Robin, and C. Lillo Influence of repeated short-term nitrogen limitations on leaf phenolics metabolism in tomato Phytochemistry 77 2012 119 128
20. U.S. Lea, R. Slimestad, P. Smedvig, and C. Lillo Nitrogen deficiency enhances expression of specific MYB and bHLH transcription factors and accumulation of end products in the flavonoid pathway Planta 225 2007 1245 1253 (Pubitemid 46434721)
21. S.F. Li, O.N. Milliken, H. Pham, R. Seyit, R. Napoli, J. Preston, A.M. Koltunow, and R.W. Parish The Arabidopsis MYB55 transcription factor regulates mucilage synthesis, seed coat development and trichome morphogenesis Plant Cell 21 2009 72 89
22. C. Lillo, U.S. Lea, and P. Ruoff Nutrient depletion as a key factor for manipulating gene expression and product formation in different branches of the flavonoid pathway Plant Cell Environ. 31 2008 587 601 (Pubitemid 351503406)
23. L. Maes, D. Inzé, and A. Goossens Functional specialization of the TRANSPARENT TESTA GLABRA1 network allows differential hormonal control of laminal and marginal trichome initiation in Arabidopsis rosette leaves Plant Physiol. 148 2008 1453 1464 (Pubitemid 352847509)
24. T. Martin, O. Oswald, and I.A. Graham Arabidopsis seedling growth, storage lipid mobilization, and photosynthetic gene expression are regulated by carbon:nitrogen availability Plant Physiol. 128 2002 472 481 (Pubitemid 34190862)
25. K. Matsui, Y. Umemura, and M. Ohme-Takagi AtMYBL2, a protein with a single MYB domain, acts as a negative regulator of anthocyanin biosynthesis in Arabidopsis Plant J. 55 2008 954 967
26. K. Morohashi, M. Zhao, M. Yang, B. Read, A. Lloyd, R. Lamb, and E. Grotewold Participation of the Arabidopsis bHLH factor GL3 in trichome initiation regulatory events Plant Physiol. 145 2007 736 746 (Pubitemid 350127610)
27. N.A. Ramsay, and B.J. Glover MYB-bHLH-WD40 protein complex and the evolution of cellular diversity Trends Plant Sci. 10 2005 63 70 (Pubitemid 40234481)
28. M.D. Rausher The evolution of flavonoids and their genes Erich Grotwold, The Science of Flavonoids 2007 Springer 175 211 10.1007/978-0-387-28822-2-7
29. S. Sawa Overexpression of the AtmybL2 gene represses trichome development in Arabidopsis DNA Res. 9 2002 31 34 (Pubitemid 36307042)
30. M. Schliep, B. Ebert, U. Simon-Rosin, D. Zoeller, and J. Fisahn Quantitative expression analysis of selected transcription factors in pavement, basal and trichome cells of mature leaves from Arabidopsis thaliana Protoplasma 241 2010 29 36
31. D. Stefanelli, I. Goodwin, and R. Jones Minimal nitrogen and water use in horticulture: effects on quality and content of selected nutrients Food Res. Int. 43 2010 1833 1843
32. R. Tominaga, M. Iwata, R. Sano, K. Inoue, K. Okada, and T. Wada Arabidopsis CAPRICE-LIKE MYB3 (CPL3) controls endoreduplication and flowering development in addition to trichome and root hair formation Development 135 2008 1335 1345 (Pubitemid 351622477)
33. R. Tominaga-Wada, and Y. Nukumizu Expression analysis of an R3-type transcription factor CPC-LIKE MYB4 (TRICHOMELESS2) and CPL4-related transcripts in Arabidopsis Int. J. Mol. Sci. 13 2012 3478 3491
34. T. Wada, T. Tachibana, Y. Shimura, and K. Okada Epidermal cell differentiation in Arabidopsis determined by a Myb homolog, CPC Science 277 1997 1113 1116 (Pubitemid 27371636)
35. S. Wang, L. Hubbard, Y. Chang, J. Guo, J. Schiefelbein, and J.-G. Chen Comprehensive analysis of single-repeat R3 MYB proteins in epidermal cell patterning and their transcriptional regulation in Arabidopsis BMC Plant Biol. 8 2008 81 10.1186/1471-2229-8-81
36. K. Wester, S. Digiuni, F. Geier, J. Timmer, C. Fleck, and M. Hülskamp Functional diversity of R3 single-repeat genes in trichome development Development 136 2009 1487 1496
37. B. Winkel-Shirley Flavonoid biosynthesis. A colorful model for genetics, biochemistry, cell biology and biotechnology Plant Physiol. 126 2001 485 493 (Pubitemid 32566604)
38. D. Winter, B. Vinegar, H. Nahal, R. Ammar, G.V. Wilson, and N.J. Provart An "electronic fluorescent pictograph" browser for exploring and analyzing large-scale biological data sets PLoS One 2 8 2007 e718
39. J. Woo, C.M. MacPherson, J. Liu, H. Wang, T. Kiba, M.A. Hannah, X.-J. Wang, V.B. Bajic, and N.-H. Chu The response and recovery of the Arabidopsis thaliana transcriptome to phosphate starvation BMC Plant Biol. 12 2012 62
40. H. Ye, L. Li, H. Guo, and Y. Yin MYBL2 is a substrate of GSK3-like kinase BIN2 acts as a corepressor of BES1 in brassinosteroid signaling pathway in Arabidopsis PNAS 109 2012 20142 20147
41. F. Zhang, A. Gonzalez, M. Zhao, C.T. Payne, and A. Lloyd A network of redundant bHLH proteins in all TTG1-dependent pathways of Arabidopsis Development 130 2003 4859 4869 (Pubitemid 37321869)
42. H.-F. Zhu, K. Fitzsimmons, A. Khandelwal, and R.G. Kranz CPC, a single-repeat R3 MYB, is a negative regulator of anthocyanin biosynthesis in Arabidopsis Mol. Plant 2 2009 790 802