메뉴 건너뛰기




Volumn 35, Issue 2, 2013, Pages 205-214

Genetic diversity of two Tibetan macaque (Macaca thibetana) populations from Guizhou and Yunnan in China based on mitochondrial DNA D-loop sequences

Author keywords

Genetic diversity; Guizhou; Macaca thibetana; Mitochondrial DNA; Yunnan

Indexed keywords

MITOCHONDRIAL DNA;

EID: 84892832355     PISSN: 19769571     EISSN: 20929293     Source Type: Journal    
DOI: 10.1007/s13258-012-0048-2     Document Type: Article
Times cited : (11)

References (47)
  • 3
    • 0032900678 scopus 로고    scopus 로고
    • Median-joining networks for inferring intraspecific phylogenies
    • Bandelt HJ, Forster P, Rohl A (1999) Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16:37-48
    • (1999) Mol Biol Evol , vol.16 , pp. 37-48
    • Bandelt, H.J.1    Forster, P.2    Rohl, A.3
  • 4
    • 0026302868 scopus 로고
    • Mitochondrial DNA diversity in fishes and its implications for introductions
    • Billington N, Hebert PDN (1991) Mitochondrial DNA diversity in fishes and its implications for introductions. Can J Fish Aquat Sci 48(S1):80-94
    • (1991) Can J Fish Aquat Sci , vol.48 , Issue.S1 , pp. 80-94
    • Billington, N.1    Hebert, P.D.N.2
  • 5
    • 0032080714 scopus 로고    scopus 로고
    • Genetic estimates of population structure and gene flow: Limitations, lessons and new directions
    • Bossart J, Pashley Prowell D (1998) Genetic estimates of population structure and gene flow: limitations, lessons and new directions. Trends Ecol Evol 13:202-206
    • (1998) Trends Ecol Evol , vol.13 , pp. 202-206
    • Bossart, J.1    Pashley Prowell, D.2
  • 6
    • 0002135777 scopus 로고
    • The mitochondrial genome of animals
    • MacIntyre RJ (ed), Plenum, New York
    • Brown WM (1985) The mitochondrial genome of animals. In: MacIntyre RJ (ed) Molecular evolutionary genetics. Plenum, New York, pp 95-130
    • (1985) Molecular Evolutionary Genetics , pp. 95-130
    • Brown, W.M.1
  • 8
    • 0026713903 scopus 로고
    • Mitochondrial DNA length variation and heteroplasmy in populations of white sturgeon (Acipenser transmontanus)
    • Brown J, Beckenbach A, Smith M (1992) Mitochondrial DNA length variation and heteroplasmy in populations of white sturgeon (Acipenser transmontanus). Genetics 132:221-228
    • (1992) Genetics , vol.132 , pp. 221-228
    • Brown, J.1    Beckenbach, A.2    Smith, M.3
  • 9
    • 0038645591 scopus 로고    scopus 로고
    • The phylogeography of dusky dolphins (Lagenorhynchus obscurus): A critical examination of network methods and rooting procedures
    • Cassens I, Van Waerebeek K, Best PB, Crespo EA, Reyes J, Milinkovitch MC (2003) The phylogeography of dusky dolphins (Lagenorhynchus obscurus): a critical examination of network methods and rooting procedures. Mol Ecol 12:1781-1792
    • (2003) Mol Ecol , vol.12 , pp. 1781-1792
    • Cassens, I.1    Van Waerebeek, K.2    Best, P.B.3    Crespo, E.A.4    Reyes, J.5    Milinkovitch, M.C.6
  • 11
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data
    • Excoffier L, Smouse PE, Quattro JM (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131:479-491
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 12
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin (version 3.0): An integrated software package for population genetics data analysis
    • Excoffier L, Laval G, Schneider S (2005) Arlequin (version 3.0): an integrated software package for population genetics data analysis. Evol Bioinform Online 1:47-50
    • (2005) Evol Bioinform Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 13
    • 0030821992 scopus 로고    scopus 로고
    • Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection
    • Fu YX (1997) Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147:915-925
    • (1997) Genetics , vol.147 , pp. 915-925
    • Fu, Y.X.1
  • 16
    • 33645332626 scopus 로고    scopus 로고
    • Low genetic diversity and biased distribution of mitochondrial DNA haplotypes in the Japanese macaque (Macaca fuscata yakui) on Yakushima Island
    • Hayaishi S, Kawamoto Y (2006) Low genetic diversity and biased distribution of mitochondrial DNA haplotypes in the Japanese macaque (Macaca fuscata yakui) on Yakushima Island. Primates 47:158-164
    • (2006) Primates , vol.47 , pp. 158-164
    • Hayaishi, S.1    Kawamoto, Y.2
  • 17
  • 18
    • 0025758683 scopus 로고
    • Heteroplasmy and polymorphism in the major noncoding region of mitochondrial DNA in Japanese monkeys: Association with tandemly repeated sequences
    • Hayasaka K, Ishida T, Horai S (1991) Heteroplasmy and polymorphism in the major noncoding region of mitochondrial DNA in Japanese monkeys: association with tandemly repeated sequences. Mol Biol Evol 8:399-415
    • (1991) Mol Biol Evol , vol.8 , pp. 399-415
    • Hayasaka, K.1    Ishida, T.2    Horai, S.3
  • 20
    • 0034808161 scopus 로고    scopus 로고
    • Mitochondrial DNA variation and biogeography of eastern gorillas
    • Jensen-seaman M, Kidd K (2001) Mitochondrial DNA variation and biogeography of eastern gorillas. Mol Ecol 10:2241-2247
    • (2001) Mol Ecol , vol.10 , pp. 2241-2247
    • Jensen-Seaman, M.1    Kidd, K.2
  • 21
    • 5544299636 scopus 로고    scopus 로고
    • Taxonomy and distribution of Tibetan macaque
    • Jiang X, Wang Y (1996) Taxonomy and distribution of Tibetan macaque. Zool Res 17:361-369
    • (1996) Zool Res , vol.17 , pp. 361-369
    • Jiang, X.1    Wang, Y.2
  • 23
    • 26044440061 scopus 로고    scopus 로고
    • A molecular phylogeny of Macaca based on mitochondrial control region sequences
    • Li QQ, Zhang YP (2004) A molecular phylogeny of Macaca based on mitochondrial control region sequences. Zool Res 25:385-390
    • (2004) Zool Res , vol.25 , pp. 385-390
    • Li, Q.Q.1    Zhang, Y.P.2
  • 24
    • 54949097762 scopus 로고    scopus 로고
    • Genetic diversity analysis of Macaca thibetana based on mitochondrial DNA control region sequences
    • Li DM, Fan LQ, Ran JH, Yin HL, Wang HX, Wu SB, Yue BS (2008) Genetic diversity analysis of Macaca thibetana based on mitochondrial DNA control region sequences. Mitochon DNA 19:446-452
    • (2008) Mitochon DNA , vol.19 , pp. 446-452
    • Li, D.M.1    Fan, L.Q.2    Ran, J.H.3    Yin, H.L.4    Wang, H.X.5    Wu, S.B.6    Yue, B.S.7
  • 25
    • 79960556193 scopus 로고    scopus 로고
    • Phylogenetic analysis of Chinese rhesus macaques (Macaca mulatta) based on mitochondrial control region sequences
    • Li DY, Xu HL, Smith DG, Chen AC, Trask JS, Zhu Q, Yao YF, Du DD, Ni QY (2011) Phylogenetic analysis of Chinese rhesus macaques (Macaca mulatta) based on mitochondrial control region sequences. Am J Primatol 73:883-895
    • (2011) Am J Primatol , vol.73 , pp. 883-895
    • Li, D.Y.1    Xu, H.L.2    Smith, D.G.3    Chen, A.C.4    Trask, J.S.5    Zhu, Q.6    Yao, Y.F.7    Du, D.D.8    Ni, Q.Y.9
  • 26
    • 54949152199 scopus 로고    scopus 로고
    • Sequence variation of mitochondrial DNA control region and population genetic diversity of Tibetan macaques Macaca thibetana in the Huangshan Mountain
    • Liu Y, Li JH, Zhao JY (2006) Sequence variation of mitochondrial DNA control region and population genetic diversity of Tibetan macaques Macaca thibetana in the Huangshan Mountain. Acta Zool Sin 52:724-730
    • (2006) Acta Zool Sin , vol.52 , pp. 724-730
    • Liu, Y.1    Li, J.H.2    Zhao, J.Y.3
  • 27
    • 0002449535 scopus 로고
    • What is mtDNA good for in the study of primate evolution
    • Melnick DJ, Hoelzer GA (1993) What is mtDNA good for in the study of primate evolution Evol Anthropol 2:2-10
    • (1993) Evol Anthropol , vol.2 , pp. 2-10
    • Melnick, D.J.1    Hoelzer, G.A.2
  • 28
    • 0001435568 scopus 로고
    • Strategies for conserving clinal, ccotypic, and disjunct population diversity in widespread species
    • Fald DA, Holsinger KE (eds), Oxford University Press, New York
    • Millar C, Libby W (1991) Strategies for conserving clinal, ccotypic, and disjunct population diversity in widespread species. In: Fald DA, Holsinger KE (eds) Genetics and Conservation of Rare Plants. Oxford University Press, New York, pp 149-170
    • (1991) Genetics and Conservation of Rare Plants , pp. 149-170
    • Millar, C.1    Libby, W.2
  • 29
    • 18844362880 scopus 로고    scopus 로고
    • Phylogeography of Barbary macaques (Macaca sylvanus) and the origin of the Gibraltar colony
    • Modolo L, Salzburger W, Martin RD (2005) Phylogeography of Barbary macaques (Macaca sylvanus) and the origin of the Gibraltar colony. Proc Natl Acad Sci USA 102:7392-7397
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 7392-7397
    • Modolo, L.1    Salzburger, W.2    Martin, R.D.3
  • 30
    • 0016629918 scopus 로고
    • The bottleneck effect and genetic variability
    • Nei M, Maruyama T, Chakraborty R (1975) The bottleneck effect and genetic variability. Evolution 29:1-10
    • (1975) Evolution , vol.29 , pp. 1-10
    • Nei, M.1    Maruyama, T.2    Chakraborty, R.3
  • 31
    • 79961136670 scopus 로고    scopus 로고
    • Mitochondrial DNA variation analysis suggests extreme low genetic diversity in Guizhou snub-nosed monkeys (Rhinopithecus brelichi)
    • Pan HJ, Shi FL, Chang ZF, Xiang ZF, Sun TT, Liu ZJ, Li M (2011) Mitochondrial DNA variation analysis suggests extreme low genetic diversity in Guizhou snub-nosed monkeys (Rhinopithecus brelichi). Chin Sci Bull 56:2541-2544
    • (2011) Chin Sci Bull , vol.56 , pp. 2541-2544
    • Pan, H.J.1    Shi, F.L.2    Chang, Z.F.3    Xiang, Z.F.4    Sun, T.T.5    Liu, Z.J.6    Li, M.7
  • 33
    • 9644301241 scopus 로고    scopus 로고
    • Model selection and model averaging in phylogenetics: Advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests
    • Posada D, Buckley TR (2004) Model selection and model averaging in phylogenetics: advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests. Syst Biol 53:793-808
    • (2004) Syst Biol , vol.53 , pp. 793-808
    • Posada, D.1    Buckley, T.R.2
  • 34
    • 0026548159 scopus 로고
    • Population growth makes waves in the distribution of pair wise genetic differences
    • Rogers AR, Harpending H (1992) Population growth makes waves in the distribution of pair wise genetic differences. Mol Biol Evol 9:552-569
    • (1992) Mol Biol Evol , vol.9 , pp. 552-569
    • Rogers, A.R.1    Harpending, H.2
  • 35
  • 36
    • 78149418437 scopus 로고    scopus 로고
    • Mitochondrial DNA Diversity among Three Subpopulations of Cynomolgus Macaques (Macaca fascicularis) Originating from the Indochinese Region
    • Shiina T, Tanaka K, Katsuyama Y, Otabe K, Sakamoto K, Kurata M, Nomura M, Yamanaka H, Nakagawa H, Inoko H (2010) Mitochondrial DNA Diversity among Three Subpopulations of Cynomolgus Macaques (Macaca fascicularis) Originating from the Indochinese Region. Exp Anim 59:567-578
    • (2010) Exp Anim , vol.59 , pp. 567-578
    • Shiina, T.1    Tanaka, K.2    Katsuyama, Y.3    Otabe, K.4    Sakamoto, K.5    Kurata, M.6    Nomura, M.7    Yamanaka, H.8    Nakagawa, H.9    Inoko, H.10
  • 37
    • 0023159436 scopus 로고
    • Gene flow and the geographic structure of natural populations
    • Slatkin M (1987) Gene flow and the geographic structure of natural populations. Science 236(4803):787
    • (1987) Science , vol.236 , Issue.4803 , pp. 787
    • Slatkin, M.1
  • 38
    • 13944271115 scopus 로고    scopus 로고
    • Mitochondrial DNA variation in Chinese and Indian rhesus macaques (Macaca mulatta)
    • Smith DG, McDonough JW (2005) Mitochondrial DNA variation in Chinese and Indian rhesus macaques (Macaca mulatta). Am J Primatol 65:1-25
    • (2005) Am J Primatol , vol.65 , pp. 1-25
    • Smith, D.G.1    McDonough, J.W.2
  • 40
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585-595
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 41
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731-2739
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 42
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL-X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 43
    • 0003993233 scopus 로고    scopus 로고
    • China red data book of endangered animals
    • Wang S (ed), Science, Beijing
    • Wang S (1998) China red data book of endangered animals. In: Wang S (ed) Mammalia. Science, Beijing, pp 48-50
    • (1998) Mammalia , pp. 48-50
    • Wang, S.1
  • 44
    • 84890417804 scopus 로고
    • The genetical structure of populations
    • Wright S (1949) The genetical structure of populations. Ann Hum Genet 15:323-354
    • (1949) Ann Hum Genet , vol.15 , pp. 323-354
    • Wright, S.1
  • 45
    • 0000862605 scopus 로고
    • The interpretation of population structure by F-statistics with special regard to systems of mating
    • Wright S (1965) The interpretation of population structure by F-statistics with special regard to systems of mating. Evolution 19:395-420
    • (1965) Evolution , vol.19 , pp. 395-420
    • Wright, S.1
  • 46
    • 65349156459 scopus 로고    scopus 로고
    • Genetic structure of the Asiatic black bear in Japan using mitochondrial DNA analysis
    • Yasukochi Y, Nishida S, Han SH, Kurosaki T, Yoneda M, Koike H (2009) Genetic structure of the Asiatic black bear in Japan using mitochondrial DNA analysis. J Hered 100:297-308
    • (2009) J Hered , vol.100 , pp. 297-308
    • Yasukochi, Y.1    Nishida, S.2    Han, S.H.3    Kurosaki, T.4    Yoneda, M.5    Koike, H.6
  • 47
    • 79952450626 scopus 로고    scopus 로고
    • Significant genetic boundaries and spatial dynamics of giant pandas occupying fragmented habitat across southwest China
    • Zhu L, Zhang S, Gu X, Wei F (2011) Significant genetic boundaries and spatial dynamics of giant pandas occupying fragmented habitat across southwest China. Mol Ecol 20:1122-1132
    • (2011) Mol Ecol , vol.20 , pp. 1122-1132
    • Zhu, L.1    Zhang, S.2    Gu, X.3    Wei, F.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.