-
2
-
-
80051978811
-
The predator becomes the prey: Regulating the ubiquitin system by ubiquitylation and degradation
-
Weissman AM, Shabek N, Ciechanover A,. The predator becomes the prey: regulating the ubiquitin system by ubiquitylation and degradation. Nat. Rev. Mol. Cell Biol. 2011; 12: 605-620.
-
(2011)
Nat. Rev. Mol. Cell Biol.
, vol.12
, pp. 605-620
-
-
Weissman, A.M.1
Shabek, N.2
Ciechanover, A.3
-
4
-
-
35348931646
-
Mechanisms, biology and inhibitors of deubiquitinating enzymes
-
Love KR, Catic A, Schlieke C, Ploegh HL,. Mechanisms, biology and inhibitors of deubiquitinating enzymes. Nat. Chem. Biol. 2007; 3: 697-705.
-
(2007)
Nat. Chem. Biol.
, vol.3
, pp. 697-705
-
-
Love, K.R.1
Catic, A.2
Schlieke, C.3
Ploegh, H.L.4
-
5
-
-
65249186662
-
Polyubiquitin binding and disassembly by deubiquitinating enzymes
-
Reyes-Turcu, FE, Wilkinson K,. Polyubiquitin binding and disassembly by deubiquitinating enzymes. Chem. Rev. 2009; 109: 1495-1508.
-
(2009)
Chem. Rev.
, vol.109
, pp. 1495-1508
-
-
Reyes-Turcu, F.E.1
Wilkinson, K.2
-
6
-
-
84863698636
-
Chemistry and biology of the ubiquitin signal
-
Spasser L, Brik A,. Chemistry and biology of the ubiquitin signal. Angew. Chem. Int. Ed. 2012; 51: 6840-6862.
-
(2012)
Angew. Chem. Int. Ed.
, vol.51
, pp. 6840-6862
-
-
Spasser, L.1
Brik, A.2
-
7
-
-
28344456279
-
A genomic and functional inventory of deubiquitinating enzymes
-
Nijman SMB, Luna-Vargas MPA, Velds A, Brummelkamp TR, Dirac MG, Sixma TK, Bermards R,. A genomic and functional inventory of deubiquitinating enzymes. Cell 2005; 123: 773-786.
-
(2005)
Cell
, vol.123
, pp. 773-786
-
-
Nijman, S.M.B.1
Luna-Vargas, M.P.A.2
Velds, A.3
Brummelkamp, T.R.4
Dirac, M.G.5
Sixma, T.K.6
Bermards, R.7
-
9
-
-
0037123605
-
Emerging roles of ubiquitin in transcription regulation
-
Conaway RC, Brower CS, Conaway JW,. Emerging roles of ubiquitin in transcription regulation. Science 2002; 296: 1254-1258.
-
(2002)
Science
, vol.296
, pp. 1254-1258
-
-
Conaway, R.C.1
Brower, C.S.2
Conaway, J.W.3
-
10
-
-
68049084674
-
Breaking the chains: Structure and function of the deubiquitinases
-
Komander D, Clague MJ, Urbe S,. Breaking the chains: structure and function of the deubiquitinases. Nat. Rev. Mol. Cell Biol. 2009; 10: 550-563.
-
(2009)
Nat. Rev. Mol. Cell Biol.
, vol.10
, pp. 550-563
-
-
Komander, D.1
Clague, M.J.2
Urbe, S.3
-
11
-
-
44849100496
-
Chemically ubiquitylated histone H2B stimulates hDot1L-mediated intranucleosomal methylation
-
McGinty RK, Kim J, Chatterjee C, Roeder RG, Muir TW,. Chemically ubiquitylated histone H2B stimulates hDot1L-mediated intranucleosomal methylation. Nature 2009; 453: 812-816.
-
(2009)
Nature
, vol.453
, pp. 812-816
-
-
McGinty, R.K.1
Kim, J.2
Chatterjee, C.3
Roeder, R.G.4
Muir, T.W.5
-
12
-
-
84874612259
-
On terminal alkynes that can react with active-site cysteine nucleophiles in proteases
-
Ekkebus R, Kasteren SIV, Kulathu Y, Scholten A, Berlin I, Geurink PP, Jong A, Goerdayal S, Neefjes J, Heck AJR, Komander D, Ovva H,. On terminal alkynes that can react with active-site cysteine nucleophiles in proteases. J. Am. Chem. Soc. 2013; 135: 2867-2870.
-
(2013)
J. Am. Chem. Soc.
, vol.135
, pp. 2867-2870
-
-
Ekkebus, R.1
Kasteren, S.I.V.2
Kulathu, Y.3
Scholten, A.4
Berlin, I.5
Geurink, P.P.6
Jong, A.7
Goerdayal, S.8
Neefjes, J.9
Heck, A.J.R.10
Komander, D.11
Ovva, H.12
-
13
-
-
78650446183
-
Chemical synthesis of ubiquitin, ubiquitin-based probes, and diubiquitin
-
Oualid FE, Merkx R, Ekkebus R, Hameed DS, Smit JJ, Jone A, Hilkmann H, Sixma TK, Ovva H,. Chemical synthesis of ubiquitin, ubiquitin-based probes, and diubiquitin. Angew. Chem. Int. Ed. 2010; 49: 10149-10153.
-
(2010)
Angew. Chem. Int. Ed.
, vol.49
, pp. 10149-10153
-
-
Oualid, F.E.1
Merkx, R.2
Ekkebus, R.3
Hameed, D.S.4
Smit, J.J.5
Jone, A.6
Hilkmann, H.7
Sixma, T.K.8
Ovva, H.9
-
14
-
-
84871031152
-
Ubiquitin chain conformation regulates recognition and activity of interacting proteins
-
Ye Y, Blaser G, Horrocks MH, Ruedas-Rama MJ, Ibrahim S, Zhukov AA, Orte A, Klenerman D, Jackson SE, Komander D,. Ubiquitin chain conformation regulates recognition and activity of interacting proteins. Nature 2012; 492: 266-270.
-
(2012)
Nature
, vol.492
, pp. 266-270
-
-
Ye, Y.1
Blaser, G.2
Horrocks, M.H.3
Ruedas-Rama, M.J.4
Ibrahim, S.5
Zhukov, A.A.6
Orte, A.7
Klenerman, D.8
Jackson, S.E.9
Komander, D.10
-
15
-
-
78649265501
-
Synthesis of defined ubiquitin dimers
-
Eger S, Scheffner M, Marx A, Rubini M,. Synthesis of defined ubiquitin dimers. J. Am. Chem. Soc. 2010; 132: 16337-16339.
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 16337-16339
-
-
Eger, S.1
Scheffner, M.2
Marx, A.3
Rubini, M.4
-
16
-
-
79960209051
-
Traceless and site-specific ubiquitination of recombinant proteins
-
Virdee S, Kapadnis PB, Elliott T, Lang K, Madrzak J, Nguyen DP, Riechmann L, Chin JW,. Traceless and site-specific ubiquitination of recombinant proteins. J. Am. Chem. Soc. 2011; 133: 10708-10711.
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 10708-10711
-
-
Virdee, S.1
Kapadnis, P.B.2
Elliott, T.3
Lang, K.4
Madrzak, J.5
Nguyen, D.P.6
Riechmann, L.7
Chin, J.W.8
-
17
-
-
84856846038
-
Targeting deubiquitinases enabled by chemical synthesis of proteins
-
Ohayon S, Spasser L, Aharoni A, Brik A,. Targeting deubiquitinases enabled by chemical synthesis of proteins. J. Am. Chem. Soc. 2012; 134: 3281-3289.
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 3281-3289
-
-
Ohayon, S.1
Spasser, L.2
Aharoni, A.3
Brik, A.4
-
18
-
-
77949875253
-
Chemically ubiquitylated PCNA as a probe for eukaryotic translesion DNA synthesis
-
Chen JJ, Ai YX, Wang JL, Haracska L, Zhuang ZH,. Chemically ubiquitylated PCNA as a probe for eukaryotic translesion DNA synthesis. Nat. Chem. Biol. 2010; 6: 270-272.
-
(2010)
Nat. Chem. Biol.
, vol.6
, pp. 270-272
-
-
Chen, J.J.1
Ai, Y.X.2
Wang, J.L.3
Haracska, L.4
Zhuang, Z.H.5
-
19
-
-
77956903406
-
Engeineered diubiquitin synthesis reveals Lys29-isopeptide specificity of an OTU deubiquitinase
-
Virdee S, Ye Y, Nguyen DP, Komander D, Chin JW,. Engeineered diubiquitin synthesis reveals Lys29-isopeptide specificity of an OTU deubiquitinase. Nat. Chem. Biol. 2010; 6: 750-757.
-
(2010)
Nat. Chem. Biol.
, vol.6
, pp. 750-757
-
-
Virdee, S.1
Ye, Y.2
Nguyen, D.P.3
Komander, D.4
Chin, J.W.5
-
20
-
-
84860319353
-
Forging isopeptide bonds using thiol-ene chemistry: Site-specific coupling of ubiquitin molecules for studying the activity of isopeptidases
-
Valkevich EM, Guenette RG, Sanchez NA, Chen YC, Ge Y, Strieter ER,. Forging isopeptide bonds using thiol-ene chemistry: site-specific coupling of ubiquitin molecules for studying the activity of isopeptidases. J. Am. Chem. Soc. 2012; 134: 6916-6919.
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 6916-6919
-
-
Valkevich, E.M.1
Guenette, R.G.2
Sanchez, N.A.3
Chen, Y.C.4
Ge, Y.5
Strieter, E.R.6
-
21
-
-
65649126339
-
Ubiquitin C-terminal electrophiles are activity-based probes for identification and mechanistic study of ubiquitin conjugating machinery
-
Love KR, Pandya RK, Spooner E, Ploegh HL,. Ubiquitin C-terminal electrophiles are activity-based probes for identification and mechanistic study of ubiquitin conjugating machinery. ACS Chem. Biol. 2009; 4: 275-287.
-
(2009)
ACS Chem. Biol.
, vol.4
, pp. 275-287
-
-
Love, K.R.1
Pandya, R.K.2
Spooner, E.3
Ploegh, H.L.4
-
22
-
-
77249098370
-
Designed semisynthetic protein inhibitors of Ub/Ub1 E1 activating enzymes
-
Lu XQ, Olsen SK, Capili AD, Cisar JS, Lima CD, Tan DS,. Designed semisynthetic protein inhibitors of Ub/Ub1 E1 activating enzymes. J. Am. Chem. Soc. 2010; 132: 1748-1749.
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 1748-1749
-
-
Lu, X.Q.1
Olsen, S.K.2
Capili, A.D.3
Cisar, J.S.4
Lima, C.D.5
Tan, D.S.6
-
23
-
-
73449105394
-
Structure-activity analysis of semisynthetic nucleosomes: Mechanistic insights into the stimulation of Dot1L by ubiquitylated histone H2B
-
McGinty RK, Kohn M, Chatterjee C, Chiang KP, Pratt MP, Muir TW,. Structure-activity analysis of semisynthetic nucleosomes: mechanistic insights into the stimulation of Dot1L by ubiquitylated histone H2B. ACS Chem. Biol. 2009; 4: 958-968.
-
(2009)
ACS Chem. Biol.
, vol.4
, pp. 958-968
-
-
McGinty, R.K.1
Kohn, M.2
Chatterjee, C.3
Chiang, K.P.4
Pratt, M.P.5
Muir, T.W.6
-
24
-
-
0027944205
-
Synthesis of protein by native chemical ligation
-
Dawson PE, Muir TW, Lewis IC, Kent SBH,. Synthesis of protein by native chemical ligation. Science 1994; 266: 776-779.
-
(1994)
Science
, vol.266
, pp. 776-779
-
-
Dawson, P.E.1
Muir, T.W.2
Lewis, I.C.3
Kent, S.B.H.4
-
25
-
-
0028223433
-
Peptide segment ligation strategy without use of protecting groups
-
Liu CF, Tam JP,. Peptide segment ligation strategy without use of protecting groups. Proc. Natl. Acad. Sci. U. S. A. 1994; 91: 6584-6588.
-
(1994)
Proc. Natl. Acad. Sci. U. S. A.
, vol.91
, pp. 6584-6588
-
-
Liu, C.F.1
Tam, J.P.2
-
26
-
-
0032499752
-
Expressed protein ligation: A general method for protein engineering
-
Muir TW, Sondhi D, Cole PA,. Expressed protein ligation: a general method for protein engineering. Proc. Natl. Acad. Sci. U. S. A. 1998; 95: 6705-6710.
-
(1998)
Proc. Natl. Acad. Sci. U. S. A.
, vol.95
, pp. 6705-6710
-
-
Muir, T.W.1
Sondhi, D.2
Cole, P.A.3
-
27
-
-
21244494055
-
Total chemical synthesis and X-ray crystal structure of a protein diastereomer: [D-Gln 35] ubiquitin
-
Bang D, Makhatadze GI, Tereshko V, Kossiakoff AA, Kent SB,. Total chemical synthesis and X-ray crystal structure of a protein diastereomer: [D-Gln 35] ubiquitin. Angew. Chem. Int. Ed. 2005; 44: 3852-3856.
-
(2005)
Angew. Chem. Int. Ed.
, vol.44
, pp. 3852-3856
-
-
Bang, D.1
Makhatadze, G.I.2
Tereshko, V.3
Kossiakoff, A.A.4
Kent, S.B.5
-
28
-
-
77956841522
-
Synthesis of K48-linked diubiquitin using dual native chemical ligation at lysine
-
Yang RL, Pasunooti KK, Li FP, Liu XW, Liu CF,. Synthesis of K48-linked diubiquitin using dual native chemical ligation at lysine. Chem. Commun. 2010; 46: 7199-7201.
-
(2010)
Chem. Commun.
, vol.46
, pp. 7199-7201
-
-
Yang, R.L.1
Pasunooti, K.K.2
Li, F.P.3
Liu, X.W.4
Liu, C.F.5
-
29
-
-
70449571896
-
A pyrrolysine analogue for site-specific protein ubiquitination
-
Li X, Fekner T, Ottesen JJ, Chan MK,. A pyrrolysine analogue for site-specific protein ubiquitination. Angew. Chem. Int. Ed. 2009; 48: 9184-9187.
-
(2009)
Angew. Chem. Int. Ed.
, vol.48
, pp. 9184-9187
-
-
Li, X.1
Fekner, T.2
Ottesen, J.J.3
Chan, M.K.4
-
30
-
-
80053897247
-
Expanded click conjugation of recombinant proteins with ubiquitin-like modifiers reveals altered substrate preference of SUMO2-modified Ubc9
-
Sommer S, Weikart ND, Brockmeyer A, Janning P, Mootz HD,. Expanded click conjugation of recombinant proteins with ubiquitin-like modifiers reveals altered substrate preference of SUMO2-modified Ubc9. Angew. Chem. Int. Ed. 2011; 50: 9888-9892.
-
(2011)
Angew. Chem. Int. Ed.
, vol.50
, pp. 9888-9892
-
-
Sommer, S.1
Weikart, N.D.2
Brockmeyer, A.3
Janning, P.4
Mootz, H.D.5
-
31
-
-
81255172803
-
Segmental isotopic labeling of ubiquitin chains to unravel monomer-specific molecular behavior
-
Castaneda CA, Spasser L, Bavikar SN, Brik A, Fushmann D,. Segmental isotopic labeling of ubiquitin chains to unravel monomer-specific molecular behavior. Angew. Chem. Int. Ed. 2011; 50: 11210-11214.
-
(2011)
Angew. Chem. Int. Ed.
, vol.50
, pp. 11210-11214
-
-
Castaneda, C.A.1
Spasser, L.2
Bavikar, S.N.3
Brik, A.4
Fushmann, D.5
-
32
-
-
84855796716
-
Chemical synthesis of ubiquitinated peptides with varying lengths and types of ubiquitin chains to explore the activity of deubiquitinases
-
Bavikar SN, Spasser L, Haj-Yahya M, Karthikeyan SV, Kumar KSA, Brik A,. Chemical synthesis of ubiquitinated peptides with varying lengths and types of ubiquitin chains to explore the activity of deubiquitinases. Angew. Chem. Int. Ed. 2012; 51: 758-763.
-
(2012)
Angew. Chem. Int. Ed.
, vol.51
, pp. 758-763
-
-
Bavikar, S.N.1
Spasser, L.2
Haj-Yahya, M.3
Karthikeyan, S.V.4
Kumar, K.S.A.5
Brik, A.6
-
33
-
-
79961241515
-
Protein chemical synthesis by ligation of peptide hydrazides
-
Fang GM, Li YM, Shen F, Huang YC, Li JB, Lin Y, Cui HK, Liu L,. Protein chemical synthesis by ligation of peptide hydrazides. Angew. Chem. Int. Ed. 2011; 50: 7645-7649.
-
(2011)
Angew. Chem. Int. Ed.
, vol.50
, pp. 7645-7649
-
-
Fang, G.M.1
Li, Y.M.2
Shen, F.3
Huang, Y.C.4
Li, J.B.5
Lin, Y.6
Cui, H.K.7
Liu, L.8
-
34
-
-
84862563295
-
Ligation of expressed protein α-hydrazides via genetic incorporation of an α-hydroxy acid
-
Li YM, Yang MY, Huang YC, Li YT, Chen PR, Liu L,. Ligation of expressed protein α-hydrazides via genetic incorporation of an α-hydroxy acid. ACS Chem. Biol. 2012; 7: 1015-1022.
-
(2012)
ACS Chem. Biol.
, vol.7
, pp. 1015-1022
-
-
Li, Y.M.1
Yang, M.Y.2
Huang, Y.C.3
Li, Y.T.4
Chen, P.R.5
Liu, L.6
-
35
-
-
0030037155
-
Extending the applicability of native chemical ligation
-
Canne LE, Bark SJ, Kent SBH,. Extending the applicability of native chemical ligation. J. Am. Chem. Soc. 1996; 118: 5891-5896.
-
(1996)
J. Am. Chem. Soc.
, vol.118
, pp. 5891-5896
-
-
Canne, L.E.1
Bark, S.J.2
Kent, S.B.H.3
-
36
-
-
0035811061
-
Total synthesis of cytochrome b562 by native chemical ligation using a removable auxiliary
-
Low DW, Hill MG, Carrasco MR, Kent SBH, Botti P,. Total synthesis of cytochrome b562 by native chemical ligation using a removable auxiliary. Proc. Natl. Acad. Sci. U. S. A. 2001; 98: 6554-6559.
-
(2001)
Proc. Natl. Acad. Sci. U. S. A.
, vol.98
, pp. 6554-6559
-
-
Low, D.W.1
Hill, M.G.2
Carrasco, M.R.3
Kent, S.B.H.4
Botti, P.5
-
37
-
-
0035804493
-
Native chemical ligation using removable Na-(1-phenyl-2-mercaptoethyl) auxiliaries
-
Botti P, Michale RC, Kent SBH,. Native chemical ligation using removable Na-(1-phenyl-2-mercaptoethyl) auxiliaries. Tetrahedron Lett. 2001; 42: 1831-1833.
-
(2001)
Tetrahedron Lett.
, vol.42
, pp. 1831-1833
-
-
Botti, P.1
Michale, R.C.2
Kent, S.B.H.3
-
38
-
-
0036570182
-
Extending synthetic access to proteins with a removable acyl transfer auxiliary
-
Offer J, Boddy CNC, Dawson PE,. Extending synthetic access to proteins with a removable acyl transfer auxiliary. J. Am. Chem. Soc. 2002; 124: 4642-4646.
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 4642-4646
-
-
Offer, J.1
Boddy, C.N.C.2
Dawson, P.E.3
-
39
-
-
33646597740
-
Sugar-assisted glycopeptides ligation
-
Brik A, Yang YY, Wong CH,. Sugar-assisted glycopeptides ligation. J. Am. Chem. Soc. 2006; 128: 5626-5627.
-
(2006)
J. Am. Chem. Soc.
, vol.128
, pp. 5626-5627
-
-
Brik, A.1
Yang, Y.Y.2
Wong, C.H.3
-
40
-
-
34250880139
-
Auxiliary-mediated site-specific peptide ubiquitylation
-
Chatterjee C, McGinty RK, Pellois JP, Muir TW,. Auxiliary-mediated site-specific peptide ubiquitylation. Angew. Chem. Int. Ed. 2007; 46: 2814-2818.
-
(2007)
Angew. Chem. Int. Ed.
, vol.46
, pp. 2814-2818
-
-
Chatterjee, C.1
McGinty, R.K.2
Pellois, J.P.3
Muir, T.W.4
-
41
-
-
84883450527
-
Chemical synthesis of Ub-AMC via ligation of peptide hydrazides
-
Liang J, Fang GM, Huang XL, Mei ZQ, Li J, Tian CL, Liu L,. Chemical synthesis of Ub-AMC via ligation of peptide hydrazides. Sci. China Chem. 2013; 56: 1301-1306.
-
(2013)
Sci. China Chem.
, vol.56
, pp. 1301-1306
-
-
Liang, J.1
Fang, G.M.2
Huang, X.L.3
Mei, Z.Q.4
Li, J.5
Tian, C.L.6
Liu, L.7
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