Quantitation of the calcium and membrane binding properties of the C2 domains of dysferlin

Biophysical Journal

Volumn 106, Issue 2, 2014, Pages 382-389

  Abdullah, Nazish ^a   Padmanarayana, Murugesh ^a   Marty, Naomi J ^a   Johnson, Colin P ^a  

^a OREGON STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CALCIUM; DYSF PROTEIN, HUMAN; MAGNESIUM; MEMBRANE PROTEIN; MUSCLE PROTEIN; STRONTIUM;

AMINO ACID SEQUENCE; ARTICLE; CELL MEMBRANE; CHEMICAL STRUCTURE; CHEMISTRY; GENETICS; HUMAN; METABOLISM; MOLECULAR GENETICS; MUTAGENESIS; MUTATION; PROTEIN BINDING; PROTEIN TERTIARY STRUCTURE;

AMINO ACID SEQUENCE; CALCIUM; CELL MEMBRANE; HUMANS; MAGNESIUM; MEMBRANE PROTEINS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MUSCLE PROTEINS; MUTAGENESIS; MUTATION; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; STRONTIUM;

EID: 84892753234     PISSN: 00063495     EISSN: 15420086     Source Type: Journal    
DOI: 10.1016/j.bpj.2013.11.4492     Document Type: Article

References (44)

1. P.L. McNeil, and R. Khakee Disruptions of muscle fiber plasma membranes. Role in exercise-induced damage Am. J. Pathol. 140 1992 1097 1109
2. M.S. Clarke, and R.W. Caldwell P.L. McNeil Contraction-induced cell wounding and release of fibroblast growth factor in heart Circ. Res. 76 1995 927 934
3. P.L. McNeil, and R.A. Steinhardt Plasma membrane disruption: repair, prevention, adaptation Annu. Rev. Cell Dev. Biol. 19 2003 697 731 (Pubitemid 37487366)
4. S.U. Rajguru, G.S. Yeargans, and N.W. Seidler Exercise causes oxidative damage to rat skeletal muscle microsomes while increasing cellular sulfhydryls Life Sci. 54 1994 149 157
5. T. Togo, and J.M. Alderton R.A. Steinhardt The mechanism of facilitated cell membrane resealing J. Cell Sci. 112 1999 719 731 (Pubitemid 29141991)
6. D. Bansal, and K. Miyake K.P. Campbell Defective membrane repair in dysferlin-deficient muscular dystrophy Nature 423 2003 168 172 (Pubitemid 36569539)
7. K.R. Doherty, and E.M. McNally Repairing the tears: dysferlin in muscle membrane repair Trends Mol. Med. 9 2003 327 330 (Pubitemid 37040027)
8. R. Han, and K.P. Campbell Dysferlin and muscle membrane repair Curr. Opin. Cell Biol. 19 2007 409 416 (Pubitemid 47277508)
9. U. Roostalu, and U. Strähle In vivo imaging of molecular interactions at damaged sarcolemma Dev. Cell 22 2012 515 529
10. G. Kawahara, and P.R. Serafini L.M. Kunkel Characterization of zebrafish dysferlin by morpholino knockdown Biochem. Biophys. Res. Commun. 413 2011 358 363
11. J. Liu, and M. Aoki R.H. Brown Jr. Dysferlin, a novel skeletal muscle gene, is mutated in Miyoshi myopathy and limb girdle muscular dystrophy Nat. Genet. 20 1998 31 36 (Pubitemid 28410339)
12. G. Serratrice, J.F. Pellissier, and V. N′guyen J. Pouget Dysferlinopathy. Example of a new myopathy Bull. Acad. Natl. Med. 186 2002 1025 1032 discussion 1033-1024
13. R. Han Muscle membrane repair and inflammatory attack in dysferlinopathy Skelet. Muscle 1 2011 10
14. R.E. Bittner, and L.V. Anderson A. Reis Dysferlin deletion in SJL mice (SJL-Dysf) defines a natural model for limb girdle muscular dystrophy 2B Nat. Genet. 23 1999 141 142 (Pubitemid 29455382)
15. I. Illa, and C. Serrano-Munuera R.H. Brown Distal anterior compartment myopathy: a dysferlin mutation causing a new muscular dystrophy phenotype Ann. Neurol. 49 2001 130 134 (Pubitemid 32163018)
16. E. Gallardo, and R. Rojas-García I. Illa Inflammation in dysferlin myopathy: immunohistochemical characterization of 13 patients Neurology 57 2001 2136 2138 (Pubitemid 33126892)
17. C. Matsuda, and M. Aoki R.H. Brown Jr. Dysferlin is a surface membrane-associated protein that is absent in Miyoshi myopathy Neurology 53 1999 1119 1122 (Pubitemid 29442134)
18. M. Fanin, and C. Angelini Muscle pathology in dysferlin deficiency Neuropathol. Appl. Neurobiol. 28 2002 461 470 (Pubitemid 35425599)
19. L.V. Anderson, and K. Davison K.M. Bushby Dysferlin is a plasma membrane protein and is expressed early in human development Hum. Mol. Genet. 8 1999 855 861 (Pubitemid 29189053)
20. N. De Luna, and A. Freixas E. Gallardo Dysferlin expression in monocytes: a source of mRNA for mutation analysis Neuromuscul. Disord. 17 2007 69 76 (Pubitemid 46186004)
21. K. Nagaraju, and R. Rawat E.P. Hoffman Dysferlin deficiency enhances monocyte phagocytosis: a model for the inflammatory onset of limb-girdle muscular dystrophy 2B Am. J. Pathol. 172 2008 774 785 (Pubitemid 351354549)
22. 2+ -mediated membrane fusion during C. elegans spermatogenesis J. Cell Sci. 119 2006 2552 2562 (Pubitemid 44070436)
23. A. Lek, and F.J. Evesson S.T. Cooper Ferlins: regulators of vesicle fusion for auditory neurotransmission, receptor trafficking and membrane repair Traffic 13 2012 185 194
24. F.J. Evesson, and R.A. Peat S.T. Cooper Reduced plasma membrane expression of dysferlin mutants is attributed to accelerated endocytosis via a syntaxin-4-associated pathway J. Biol. Chem. 285 2010 28529 28539
25. 2+-binding domain J. Biol. Chem. 273 1998 15879 15882 (Pubitemid 28311347)
26. D. Zhang, and L. Aravind Identification of novel families and classification of the C2 domain superfamily elucidate the origin and evolution of membrane targeting activities in eukaryotes Gene 469 2010 18 30
27. S. Martens, and H.T. McMahon C2 domains and membrane fusion Curr. Top. Membr 68 2011 141 159
28. E.A. Nalefski, and J.J. Falke The C2 domain calcium-binding motif: structural and functional diversity Protein Sci. 5 1996 2375 2390 (Pubitemid 26424851)
29. C. Therrien, and S. Di Fulvio M. Sinnreich Characterization of lipid binding specificities of dysferlin C2 domains reveals novel interactions with phosphoinositides Biochemistry 48 2009 2377 2384
30. C.P. Johnson, and E.R. Chapman Otoferlin is a calcium sensor that directly regulates SNARE-mediated membrane fusion J. Cell Biol. 191 2010 187 197
31. 2A domain of otoferlin reveals an unconventional top loop region J. Mol. Biol. 406 2011 479 490
32. D.B. Davis, and K.R. Doherty E.M. McNally Calcium-sensitive phospholipid binding properties of normal and mutant ferlin C2 domains J. Biol. Chem. 277 2002 22883 22888 (Pubitemid 34967270)
33. M.I. Donnelly, and M. Zhou A. Joachimiak An expression vector tailored for large-scale, high-throughput purification of recombinant proteins Protein Expr. Purif. 47 2006 446 454 (Pubitemid 43729014)
34. J.L. Jiménez, and R. Bashir In silico functional and structural characterisation of ferlin proteins by mapping disease-causing mutations and evolutionary information onto three-dimensional models of their C2 domains J. Neurol. Sci. 260 2007 114 123 (Pubitemid 47225087)
35. M.M. Julkowska, J.M. Rankenberg, and C. Testerink Liposome-binding assays to assess specificity and affinity of phospholipid-protein interactions Methods Mol. Biol. 1009 2013 261 271
36. L. Zheng, and R. Krishnamoorthi X. Wang Distinct Ca2+ binding properties of novel C2 domains of plant phospholipase dalpha and β J. Biol. Chem. 275 2000 19700 19706 (Pubitemid 30441566)
37. A. Torrecillas, and J. Laynez J.C. Gómez-Fernández Calorimetric study of the interaction of the C2 domains of classical protein kinase C isoenzymes with Ca2+ and phospholipids Biochemistry 43 2004 11727 11739 (Pubitemid 39277618)
38. 2+ affinity of synaptotagmin 1 is markedly increased by a specific interaction of its C2B domain with phosphatidylinositol 4,5-bisphosphate J. Biol. Chem. 284 2009 25749 25760
39. C.H. Fox, and E.A. Timm Jr. P.K. Wallace A method for measuring intracellular free magnesium concentration in platelets using flow cytometry Magnes. Res. 20 2007 200 207 (Pubitemid 47568614)
40. M.A. Lemmon Membrane recognition by phospholipid-binding domains Nat. Rev. Mol. Cell Biol. 9 2008 99 111 (Pubitemid 351158910)
41. M. Giladi, and L. Michaeli J.A. Hirsch The C2B domain is the primary Ca(2+) sensor in DOC2B: a structural and functional analysis J. Mol. Biol. 425 2013 4629 4641
42. H. Pappa, and J. Murray-Rust N.Q. McDonald Crystal structure of the C2 domain from protein kinase C-delta Structure 6 1998 885 894 (Pubitemid 28348651)
43. O. Perisic, and S. Fong R.L. Williams Crystal structure of a calcium-phospholipid binding domain from cytosolic phospholipase A2 J. Biol. Chem. 273 1998 1596 1604 (Pubitemid 28133685)
44. R.B. Sutton, J.A. Ernst, and A.T. Brunger Crystal structure of the cytosolic C2A-C2B domains of synaptotagmin III. Implications for Ca(+2)-independent snare complex interaction J. Cell Biol. 147 1999 589 598 (Pubitemid 29523464)