메뉴 건너뛰기




Volumn 6, Issue , 2012, Pages

Burst analysis tool for developing neuronal networks exhibiting highly varying action potential dynamics

Author keywords

Action potential bursts; Burst analysis; Developing neuronal networks; HESCs; Human embryonic stem cells; MEA; Microelectrode array; Spike trains

Indexed keywords

CYTOLOGY; DYNAMICS; GRAPHIC METHODS; MICROELECTRODES; MORE ELECTRIC AIRCRAFT; NEURONS; SIGNAL DETECTION; STATISTICAL METHODS; STEM CELLS;

EID: 84892601587     PISSN: None     EISSN: 16625188     Source Type: Journal    
DOI: 10.3389/fncom.2012.00038     Document Type: Article
Times cited : (62)

References (42)
  • 3
    • 79955411486 scopus 로고    scopus 로고
    • The controlled generation of functional basal forebrain cholinergic neurons from human embryonic stem cells
    • Bissonnette, C. J., Lyass, L., Bhattacharyya, B. J., Belmadani, A., Miller, R. J., and Kessler, J. A. (2011). The controlled generation of functional basal forebrain cholinergic neurons from human embryonic stem cells. Stem Cells 29, 802-811.
    • (2011) Stem Cells , vol.29 , pp. 802-811
    • Bissonnette, C.J.1    Lyass, L.2    Bhattacharyya, B.J.3    Belmadani, A.4    Miller, R.J.5    Kessler, J.A.6
  • 4
  • 5
    • 18244405293 scopus 로고    scopus 로고
    • Burst detection algorithms for the analysis of spatio-temporal patterns in cortical networks of neurons
    • Chiappalone, M., Novellino, A., Vajda, I., Vato, A., Martinoia, S., and van Pelt, J. (2005). Burst detection algorithms for the analysis of spatio-temporal patterns in cortical networks of neurons. Neurocomputing 65-66, 653-662.
    • (2005) Neurocomputing , vol.65-66 , pp. 653-662
    • Chiappalone, M.1    Novellino, A.2    Vajda, I.3    Vato, A.4    Martinoia, S.5    Van Pelt, J.6
  • 6
    • 0020375368 scopus 로고
    • Electrophysiological properties of neocortical neurons in vitro
    • Connors, B. W., Gutnick, M. J., and Prince, D. A. (1982). Electrophysiological properties of neocortical neurons in vitro. J. Neurophysiol. 48, 1302-1320.
    • (1982) J. Neurophysiol. , vol.48 , pp. 1302-1320
    • Connors, B.W.1    Gutnick, M.J.2    Prince, D.A.3
  • 7
    • 67649856579 scopus 로고    scopus 로고
    • Molecular and magnetic resonance imaging of human embryonic stem cell-derived neural stem cell grafts in ischemic rat brain
    • Daadi, M. M., Li, Z., Arac, A., Grueter, B. A., Sofilos, M., Malenka, R. C., Wu, J. C., and Steinberg, G. K. (2009). Molecular and magnetic resonance imaging of human embryonic stem cell-derived neural stem cell grafts in ischemic rat brain. Mol. Ther. 17, 1282-1291.
    • (2009) Mol. Ther. , vol.17 , pp. 1282-1291
    • Daadi, M.M.1    Li, Z.2    Arac, A.3    Grueter, B.A.4    Sofilos, M.5    Malenka, R.C.6    Wu, J.C.7    Steinberg, G.K.8
  • 10
    • 0029742202 scopus 로고    scopus 로고
    • Chattering cells: Superficial pyramidal neurons contributing to the generation of synchronous oscillations in the visual cortex
    • Gray, C. M., and McCormick, D. A. (1996). Chattering cells: superficial pyramidal neurons contributing to the generation of synchronous oscillations in the visual cortex. Science 274, 109-113.
    • (1996) Science , vol.274 , pp. 109-113
    • Gray, C.M.1    McCormick, D.A.2
  • 11
    • 0017759085 scopus 로고
    • A new fixed-array multi-microelectrode system designed for long-term monitoring of extracellular single unit neuronal activity in vitro
    • Gross, G. W., Rieske, E., Kreutzberg, G. W., and Meyer, A. (1977). A new fixed-array multi-microelectrode system designed for long-term monitoring of extracellular single unit neuronal activity in vitro. Neurosci. Lett. 6, 101-105.
    • (1977) Neurosci. Lett. , vol.6 , pp. 101-105
    • Gross, G.W.1    Rieske, E.2    Kreutzberg, G.W.3    Meyer, A.4
  • 12
    • 0034778369 scopus 로고    scopus 로고
    • Temporal interaction between single spikes and complex spike bursts in hippocampal pyramidal cells
    • Harris, K. D., Hirase, H., Leinekugel, X., Henze, D. A., and Buzsáki, G. (2001). Temporal interaction between single spikes and complex spike bursts in hippocampal pyramidal cells. Neuron 32, 141-149.
    • (2001) Neuron , vol.32 , pp. 141-149
    • Harris, K.D.1    Hirase, H.2    Leinekugel, X.3    Henze, D.A.4    Buzsáki, G.5
  • 14
    • 78951483473 scopus 로고    scopus 로고
    • Application of micro-electrode arrays (MEAs) as an emerging technology for developmental neurotoxicity: Evaluation of domoic acid-induced effects in primary cultures of rat cortical neurons
    • Hogberg, H. T., Sobanski, T., Novellino, A., Whelan, M., Weiss, D. G., and Bal-Price, A. K. (2011). Application of micro-electrode arrays (MEAs) as an emerging technology for developmental neurotoxicity: evaluation of domoic acid-induced effects in primary cultures of rat cortical neurons. Neurotoxicology 32, 158-168.
    • (2011) Neurotoxicology , vol.32 , pp. 158-168
    • Hogberg, H.T.1    Sobanski, T.2    Novellino, A.3    Whelan, M.4    Weiss, D.G.5    Bal-Price, A.K.6
  • 15
    • 33847271325 scopus 로고    scopus 로고
    • BvP neurons exhibit a larger variety in statistics of inter-spike intervals than LIF neurons
    • Hosaka, R., Sakai, Y., Ikeguchi, T., and Yoshizawa, S. (2006). BvP neurons exhibit a larger variety in statistics of inter-spike intervals than LIF neurons. J. Phys. Soc. Jpn. 75, 124007.
    • (2006) J. Phys. Soc. Jpn. , vol.75 , pp. 124007
    • Hosaka, R.1    Sakai, Y.2    Ikeguchi, T.3    Yoshizawa, S.4
  • 16
    • 0027481101 scopus 로고
    • Formation and maturation of synapses in primary cultures of rat cerebral cortical cells: An electron microscopic study
    • Ichikawa, M., Muramoto, K., Kobayashi, K., Kawahara, M., and Kuroda, Y. (1993). Formation and maturation of synapses in primary cultures of rat cerebral cortical cells: an electron microscopic study. Neurosci. Res. 16, 95-103.
    • (1993) Neurosci. Res. , vol.16 , pp. 95-103
    • Ichikawa, M.1    Muramoto, K.2    Kobayashi, K.3    Kawahara, M.4    Kuroda, Y.5
  • 17
    • 34548208652 scopus 로고    scopus 로고
    • Development and pharmacological modulation of embryonic stem cell-derived neuronal network activity
    • Illes, S., Fleischer, W., Siebler, M., Hartung, H. P., and Dihné, M. (2007). Development and pharmacological modulation of embryonic stem cell-derived neuronal network activity. Exp. Neurol. 207, 171-176.
    • (2007) Exp. Neurol. , vol.207 , pp. 171-176
    • Illes, S.1    Fleischer, W.2    Siebler, M.3    Hartung, H.P.4    Dihné, M.5
  • 18
    • 0037363017 scopus 로고    scopus 로고
    • Bursts as a unit of neuronal information: Selective communication via resonance
    • Izhikevich, E. M., Desai, N. S., Walcott, E. C., and Hoppensteadt, F. C. (2003). Bursts as a unit of neuronal information: selective communication via resonance. Trends Neurosci. 26, 161-167.
    • (2003) Trends Neurosci , vol.26 , pp. 161-167
    • Izhikevich, E.M.1    Desai, N.S.2    Walcott, E.C.3    Hoppensteadt, F.C.4
  • 19
    • 0036286389 scopus 로고    scopus 로고
    • Cooling abolishes neuronal network synchronization in rat hippocampal slices
    • Javedan, S. P., Fisher, R. S., Eder, H. G., Smith, K., and Wu, J. (2002). Cooling abolishes neuronal network synchronization in rat hippocampal slices. Epilepsia 43, 574-580.
    • (2002) Epilepsia , vol.43 , pp. 574-580
    • Javedan, S.P.1    Fisher, R.S.2    Eder, H.G.3    Smith, K.4    Wu, J.5
  • 20
    • 0029962770 scopus 로고    scopus 로고
    • Spontaneous periodic synchronized bursting during formation of mature patterns of connections in cortical cultures
    • Kamioka, H., Maeda, E., Jimbo, Y., Robinson, H. P., and Kawana, A. (1996). Spontaneous periodic synchronized bursting during formation of mature patterns of connections in cortical cultures. Neurosci. Lett. 206, 109-112.
    • (1996) Neurosci. Lett. , vol.206 , pp. 109-112
    • Kamioka, H.1    Maeda, E.2    Jimbo, Y.3    Robinson, H.P.4    Kawana, A.5
  • 21
    • 0001192938 scopus 로고
    • Electrophysiology of hippocampal neurons. II. After-potentials and repetitive firing
    • Kandel, E. R., and Spencer, W. A. (1961). Electrophysiology of hippocampal neurons. II. After-potentials and repetitive firing. J. Neurophysiol. 24, 243-259.
    • (1961) J. Neurophysiol. , vol.24 , pp. 243-259
    • Kandel, E.R.1    Spencer, W.A.2
  • 22
    • 78651376222 scopus 로고    scopus 로고
    • Local field potentials indicate network state and account for neuronal response variability
    • Kelly, R. C., Smith, M. A., Kass, R. E., and Lee, T. S. (2010). Local field potentials indicate network state and account for neuronal response variability. J. Comput. Neurosci. 29, 567-579.
    • (2010) J. Comput. Neurosci. , vol.29 , pp. 567-579
    • Kelly, R.C.1    Smith, M.A.2    Kass, R.E.3    Lee, T.S.4
  • 23
    • 2542452049 scopus 로고    scopus 로고
    • How to read a burst duration code
    • Kepecs, A., and Lisman, J. (2004). How to read a burst duration code. Neurocomputing 58-60, 1-6.
    • (2004) Neurocomputing , vol.58-60 , pp. 1-6
    • Kepecs, A.1    Lisman, J.2
  • 25
    • 46749153860 scopus 로고    scopus 로고
    • Endothelium-induced proliferation and electrophysiological differentiation of human embryonic stem cell-derived neuronal precursors
    • Lai, B., Mao, X. O., Greenberg, D. A., and Jin, K. (2008). Endothelium-induced proliferation and electrophysiological differentiation of human embryonic stem cell-derived neuronal precursors. Stem Cells Dev. 17, 565-572.
    • (2008) Stem Cells Dev , vol.17 , pp. 565-572
    • Lai, B.1    Mao, X.O.2    Greenberg, D.A.3    Jin, K.4
  • 27
    • 0031059920 scopus 로고    scopus 로고
    • Bursts as a unit of neural information: Making unreliable synapses reliable
    • Lisman, J. E. (1997). Bursts as a unit of neural information: making unreliable synapses reliable. Trends Neurosci. 20, 38-43.
    • (1997) Trends Neurosci , vol.20 , pp. 38-43
    • Lisman, J.E.1
  • 29
    • 0028828515 scopus 로고
    • The mechanisms of generation and propagation of synchronized bursting in developing networks of cortical neurons
    • Maeda, E., Robinson, H. P., and Kawana, A. (1995). The mechanisms of generation and propagation of synchronized bursting in developing networks of cortical neurons. J. Neurosci. 15, 6834-6845.
    • (1995) J. Neurosci. , vol.15 , pp. 6834-6845
    • Maeda, E.1    Robinson, H.P.2    Kawana, A.3
  • 31
    • 84855846370 scopus 로고    scopus 로고
    • Recurrence quantification analysis of spontaneous electrophysiological activity during development: Characterization of in vitro neuronal networks cultured on multi electrode array chips
    • 2010
    • Novellino, A., and Zaldivar, J.-M. (2010). Recurrence quantification analysis of spontaneous electrophysiological activity during development: characterization of in vitro neuronal networks cultured on multi electrode array chips. Adv. Artif. Intell. 2010, 10.
    • (2010) Adv. Artif. Intell. , vol.10
    • Novellino, A.1    Zaldivar, J.-M.2
  • 32
    • 77956916948 scopus 로고    scopus 로고
    • A self-adapting approach for the detection of bursts and network bursts in neuronal cultures
    • Pasquale, V., Martinoia, S., and Chiappalone, M. (2010). A self-adapting approach for the detection of bursts and network bursts in neuronal cultures. J. Comput. Neurosci. 29, 219-229.
    • (2010) J. Comput. Neurosci. , vol.29 , pp. 219-229
    • Pasquale, V.1    Martinoia, S.2    Chiappalone, M.3
  • 33
    • 0018899387 scopus 로고
    • Recording action potentials from cultured neurons with extracellular microcircuit electrodes
    • Pine, J. (1980). Recording action potentials from cultured neurons with extracellular microcircuit electrodes. J. Neurosci. Methods 2, 19-31.
    • (1980) J. Neurosci. Methods , vol.2 , pp. 19-31
    • Pine, J.1
  • 34
  • 35
    • 60649118121 scopus 로고    scopus 로고
    • CD marker expression profiles of human embryonic stem cells and their neural derivatives, determined using flow cytometric analysis, reveal a novel CD marker for exclusion of pluripotent stem cells
    • Sundberg, M., Jansson, L., Ketolainen, J., Pihlajamäki, H., Suuronen, R., Skottman, H., Inzunza, J., Hovatta, O., and Narkilahti, S. (2009). CD marker expression profiles of human embryonic stem cells and their neural derivatives, determined using flow cytometric analysis, reveal a novel CD marker for exclusion of pluripotent stem cells. Stem Cell Res. 2, 113-124.
    • (2009) Stem Cell Res , vol.2 , pp. 113-124
    • Sundberg, M.1    Jansson, L.2    Ketolainen, J.3    Pihlajamäki, H.4    Suuronen, R.5    Skottman, H.6    Inzunza, J.7    Hovatta, O.8    Narkilahti, S.9
  • 36
    • 0036061823 scopus 로고    scopus 로고
    • An alternate burst analysis for detecting intra-burst firings based on inter-burst periods
    • Tam, D. C. (2002). An alternate burst analysis for detecting intra-burst firings based on inter-burst periods. Neurocomputing 44-46, 1155-1159.
    • (2002) Neurocomputing , vol.44-46 , pp. 1155-1159
    • Tam, D.C.1
  • 37
    • 37649028774 scopus 로고    scopus 로고
    • Analytical characterization of spontaneous firing in networks of developing rat cultured cortical neurons
    • Tateno, T., Kawana, A., and Jimbo, Y. (2002). Analytical characterization of spontaneous firing in networks of developing rat cultured cortical neurons. Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 65, 051924.
    • (2002) Phys. Rev. E Stat. Nonlin. Soft Matter Phys. , vol.65 , pp. 051924
    • Tateno, T.1    Kawana, A.2    Jimbo, Y.3
  • 38
    • 19544394715 scopus 로고    scopus 로고
    • The string method of burst identification in neuronal spike trains
    • Turnbull, L., Dian, E., and Gross, G. (2005). The string method of burst identification in neuronal spike trains. J. Neurosci. Methods 145, 23-35.
    • (2005) J. Neurosci. Methods , vol.145 , pp. 23-35
    • Turnbull, L.1    Dian, E.2    Gross, G.3
  • 39
    • 33645337367 scopus 로고    scopus 로고
    • An extremely rich repertoire of bursting patterns during the development of cortical cultures
    • Wagenaar, D. A., Pine, J., and Potter, S. M. (2006). An extremely rich repertoire of bursting patterns during the development of cortical cultures. BMC Neurosci. 7, 11.
    • (2006) BMC Neurosci , vol.7 , pp. 11
    • Wagenaar, D.A.1    Pine, J.2    Potter, S.M.3
  • 40
    • 12844266187 scopus 로고    scopus 로고
    • Burst firing of oxytocin neurons in Male rat hypothalamic slices
    • Wang, Y. F., and Hatton, G. I. (2005). Burst firing of oxytocin neurons in male rat hypothalamic slices. Brain Res. 1032, 36-43.
    • (2005) Brain Res , vol.1032 , pp. 36-43
    • Wang, Y.F.1    Hatton, G.I.2
  • 41
    • 84055224146 scopus 로고    scopus 로고
    • Human embryonic stem cell-derived neurons adopt and regulate the activity of an established neuronal network
    • Weick, J. P., Liu, Y., and Zhang, S.-C. (2011). Human embryonic stem cell-derived neurons adopt and regulate the activity of an established neuronal network. Proc. Natl. Acad. Sci. U.S.A. 108, 20189-20194.
    • (2011) Proc. Natl. Acad. Sci. U.S.A. , vol.108 , pp. 20189-20194
    • Weick, J.P.1    Liu, Y.2    Zhang, S.-C.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.