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Volumn 450-451, Issue , 2014, Pages 297-307

Multiple reassortment events among highly pathogenic avian influenza A(H5N1) viruses detected in Bangladesh

(26)  Gerloff, Nancy A a   Khan, Salah Uddin b   Balish, Amanda a   Shanta, Ireen S b   Simpson, Natosha a   Berman, LaShondra a   Haider, Najmul b   Poh, Mee Kian a   Islam, Ausraful b   Gurley, Emily b   Hasnat, Md Abdul b   Dey, T c   Shu, Bo a   Emery, Shannon a   Lindstrom, Stephen a   Haque, Ainul d   Klimov, Alexander a   Villanueva, Julie a   Rahman, Mahmudur e   Azziz Baumgartner, Eduardo a   more..


Author keywords

Antigenicity; Avian influenza; Bangladesh; Evolution; Orthomyxovirus; Phylogenetics; Reassortment

Indexed keywords

ARTICLE; BANGLADESH; CLADISTICS; CONTROLLED STUDY; GENE SEQUENCE; GENETIC REASSORTMENT; GENOTYPE; HOST SELECTION; INFLUENZA VIRUS A H5N1; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE ANALYSIS; VIRUS DETECTION; VIRUS GENOME; VIRUS ISOLATION; VIRUS VIRULENCE;

EID: 84892447528     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1016/j.virol.2013.12.023     Document Type: Article
Times cited : (33)

References (58)
  • 1
    • 84870242418 scopus 로고    scopus 로고
    • Molecular epidemiology of circulating highly pathogenic avian influenza (H5N1) virus in chickens, in Bangladesh, 2007-2010
    • Ahmed S.S., Themudo G.E., Christensen J.P., Biswas P.K., Giasuddin M., Samad M.A., Toft N., Ersboll A.K. Molecular epidemiology of circulating highly pathogenic avian influenza (H5N1) virus in chickens, in Bangladesh, 2007-2010. Vaccine 2012, 30:7381-7390.
    • (2012) Vaccine , vol.30 , pp. 7381-7390
    • Ahmed, S.S.1    Themudo, G.E.2    Christensen, J.P.3    Biswas, P.K.4    Giasuddin, M.5    Samad, M.A.6    Toft, N.7    Ersboll, A.K.8
  • 3
    • 0019513851 scopus 로고
    • Proteolytic cleavage of influenza virus hemagglutinins: primary structure of the connecting peptide between HA1 and HA2 determines proteolytic cleavability and pathogenicity of Avian influenza viruses
    • Bosch F.X., Garten W., Klenk H.D., Rott R. Proteolytic cleavage of influenza virus hemagglutinins: primary structure of the connecting peptide between HA1 and HA2 determines proteolytic cleavability and pathogenicity of Avian influenza viruses. Virology 1981, 113:725-735.
    • (1981) Virology , vol.113 , pp. 725-735
    • Bosch, F.X.1    Garten, W.2    Klenk, H.D.3    Rott, R.4
  • 11
    • 84876706454 scopus 로고    scopus 로고
    • Characterization of clade 2.3.2.1 H5N1 highly pathogenic avian influenza viruses isolated from wild birds (Mandarin Duck and Eurasian Eagle Owl) in 2010 in Korea
    • Choi J.-G., Kang H.-M., Jeon W.-J., Choi K.-S., Kim K.-I., Song B., Lee H.-S., Kim J.-H., Lee Y.-J. Characterization of clade 2.3.2.1 H5N1 highly pathogenic avian influenza viruses isolated from wild birds (Mandarin Duck and Eurasian Eagle Owl) in 2010 in Korea. Viruses 2013, 5:1153-1174.
    • (2013) Viruses , vol.5 , pp. 1153-1174
    • Choi, J.-G.1    Kang, H.-M.2    Jeon, W.-J.3    Choi, K.-S.4    Kim, K.-I.5    Song, B.6    Lee, H.-S.7    Kim, J.-H.8    Lee, Y.-J.9
  • 13
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond A.J., Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 2007, 7:214.
    • (2007) BMC Evol. Biol. , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 15
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • Edgar R.C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 2004, 32:1792-1797.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 16
    • 58749108441 scopus 로고    scopus 로고
    • Two amino acid residues in the matrix protein M1 contribute to the virulence difference of H5N1 avian influenza viruses in mice
    • Fan S., Deng G., Song J., Tian G., Suo Y., Jiang Y., Guan Y., Bu Z., Kawaoka Y., Chen H. Two amino acid residues in the matrix protein M1 contribute to the virulence difference of H5N1 avian influenza viruses in mice. Virology 2009, 384:28-32.
    • (2009) Virology , vol.384 , pp. 28-32
    • Fan, S.1    Deng, G.2    Song, J.3    Tian, G.4    Suo, Y.5    Jiang, Y.6    Guan, Y.7    Bu, Z.8    Kawaoka, Y.9    Chen, H.10
  • 17
    • 84892448796 scopus 로고    scopus 로고
    • Global livestock production and health atlas (GLiPHA)
    • FAO. FAO.
    • FAO, 2013a. Global livestock production and health atlas (GLiPHA). FAO.
    • (2013)
  • 18
    • 84892461726 scopus 로고    scopus 로고
    • Time series and cross sectional data relating to food and agriculture for some 200 countries
    • FAO, FAO.
    • FAO, 2013b. Time series and cross sectional data relating to food and agriculture for some 200 countries. FAO.
    • (2013)
  • 19
    • 77950273940 scopus 로고    scopus 로고
    • Use of antigenic cartography in vaccine seed strain selection
    • Fouchier R.A., Smith D.J. Use of antigenic cartography in vaccine seed strain selection. Avian Dis. 2010, 54:220-223.
    • (2010) Avian Dis. , vol.54 , pp. 220-223
    • Fouchier, R.A.1    Smith, D.J.2
  • 22
    • 0035190544 scopus 로고    scopus 로고
    • Comparison of the activities of zanamivir, oseltamivir, and RWJ-270201 against clinical isolates of influenza virus and neuraminidase inhibitor-resistant variants
    • Gubareva L.V., Webster R.G., Hayden F.G. Comparison of the activities of zanamivir, oseltamivir, and RWJ-270201 against clinical isolates of influenza virus and neuraminidase inhibitor-resistant variants. Antimicrob. Agents Chemother. 2001, 45:3403-3408.
    • (2001) Antimicrob. Agents Chemother. , vol.45 , pp. 3403-3408
    • Gubareva, L.V.1    Webster, R.G.2    Hayden, F.G.3
  • 24
    • 84969153365 scopus 로고    scopus 로고
    • ioEdit:a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Nucleic Acids Symp Ser, 41st ed.
    • Hall, T.A., 1999. BioEdit:a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. In: Nucleic Acids Symp Ser, 41st ed.
    • (1999)
    • Hall, T.A.1
  • 26
    • 84874792492 scopus 로고    scopus 로고
    • Two highly pathogenic avian influenza H5N1 viruses of clade 2.3.2.1 with similar genetic background but with different pathogenicity in mice and ducks
    • Hu J., Zhao K., Liu X., Wang X., Chen Z., Liu X. Two highly pathogenic avian influenza H5N1 viruses of clade 2.3.2.1 with similar genetic background but with different pathogenicity in mice and ducks. Transbound Emerg. Dis. 2013, 60:127-139.
    • (2013) Transbound Emerg. Dis. , vol.60 , pp. 127-139
    • Hu, J.1    Zhao, K.2    Liu, X.3    Wang, X.4    Chen, Z.5    Liu, X.6
  • 27
    • 84861321624 scopus 로고    scopus 로고
    • Outbreak of mild respiratory disease caused by H5N1 and H9N2 infections among young children in Dhaka, Bangladesh
    • International Centre for Diarrhoeal Disease Research B.
    • International Centre for Diarrhoeal Disease Research B. Outbreak of mild respiratory disease caused by H5N1 and H9N2 infections among young children in Dhaka, Bangladesh. Health Sci. Bull. 2011, 9:5-12.
    • (2011) Health Sci. Bull. , vol.9 , pp. 5-12
  • 33
    • 71149087334 scopus 로고    scopus 로고
    • Characterization of a highly pathogenic avian influenza H5N1 clade 2.3.4 virus isolated from a tree sparrow
    • Liu Q., Ma J., Kou Z., Pu J., Lei F., Li T., Liu J. Characterization of a highly pathogenic avian influenza H5N1 clade 2.3.4 virus isolated from a tree sparrow. Virus Res. 2010, 147:25-29.
    • (2010) Virus Res. , vol.147 , pp. 25-29
    • Liu, Q.1    Ma, J.2    Kou, Z.3    Pu, J.4    Lei, F.5    Li, T.6    Liu, J.7
  • 40
    • 84892448733 scopus 로고    scopus 로고
    • FigTree, 1.3.1st ed. Institute of Evolutionary Biology, University of Edinburgh, Edinburgh (Tree Figure Drawing Tool).
    • Rambaut, A., 2009. FigTree, 1.3.1st ed. Institute of Evolutionary Biology, University of Edinburgh, Edinburgh (Tree Figure Drawing Tool).
    • (2009)
    • Rambaut, A.1
  • 43
    • 28944450584 scopus 로고    scopus 로고
    • Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences
    • Shapiro B., Rambaut A., Drummond A.J. Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences. Mol. Biol. Evol. 2006, 23:7-9.
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 7-9
    • Shapiro, B.1    Rambaut, A.2    Drummond, A.J.3
  • 45
    • 1542315573 scopus 로고    scopus 로고
    • PB2 amino acid at position 627 affects replicative efficiency, but not cell tropism, of Hong Kong H5N1 influenza A viruses in mice
    • Shinya K., Hamm S., Hatta M., Ito H., Ito T., Kawaoka Y. PB2 amino acid at position 627 affects replicative efficiency, but not cell tropism, of Hong Kong H5N1 influenza A viruses in mice. Virology 2004, 320:258-266.
    • (2004) Virology , vol.320 , pp. 258-266
    • Shinya, K.1    Hamm, S.2    Hatta, M.3    Ito, H.4    Ito, T.5    Kawaoka, Y.6
  • 47
    • 0027468737 scopus 로고
    • A single amino acid in the PB2 gene of influenza A virus is a determinant of host range
    • Subbarao E.K., London W., Murphy B.R. A single amino acid in the PB2 gene of influenza A virus is a determinant of host range. J. Virol. 1993, 67:1761-1764.
    • (1993) J. Virol. , vol.67 , pp. 1761-1764
    • Subbarao, E.K.1    London, W.2    Murphy, B.R.3
  • 48
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 2011, 28:2731-2739.
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 50
    • 83555173308 scopus 로고    scopus 로고
    • Continued evolution of highly pathogenic avian influenza A (H5N1): updated nomenclature
    • WHO
    • WHO Continued evolution of highly pathogenic avian influenza A (H5N1): updated nomenclature. Influenza Other Respir. Viruses 2012, 6:1-5.
    • (2012) Influenza Other Respir. Viruses , vol.6 , pp. 1-5
  • 51
    • 84860529273 scopus 로고    scopus 로고
    • Antigenic and Genetic Characteristics of Zoonotic Influenza Viruses and Development of Candidate Vaccine Viruses for Pandemic Preparedness
    • WHO
    • WHO, 2013a. Antigenic and Genetic Characteristics of Zoonotic Influenza Viruses and Development of Candidate Vaccine Viruses for Pandemic Preparedness.
    • (2013)
  • 52
    • 84888048673 scopus 로고    scopus 로고
    • Overview of the Emergence and Characteristics of the Avian Influenza A(H7N9) Virus
    • WHO, WHO.
    • WHO, 2013b. Overview of the Emergence and Characteristics of the Avian Influenza A(H7N9) Virus. WHO.
    • (2013)
  • 53
    • 84860312315 scopus 로고    scopus 로고
    • Cumulative Number of Confirmed Human Cases for Avian Influenza A(H5N1) Reported to WHO, 2003-2013
    • WHO/GIP, WHO, Geneva.
    • WHO/GIP, 2013. Cumulative Number of Confirmed Human Cases for Avian Influenza A(H5N1) Reported to WHO, 2003-2013. WHO, Geneva.
    • (2013)
  • 54
    • 0029970097 scopus 로고    scopus 로고
    • Maximum-likelihood models for combined analyses of multiple sequence data
    • Yang Z. Maximum-likelihood models for combined analyses of multiple sequence data. J. Mol. Evol. 1996, 42:587-596.
    • (1996) J. Mol. Evol. , vol.42 , pp. 587-596
    • Yang, Z.1
  • 57
    • 69249211158 scopus 로고    scopus 로고
    • A novel genotype H9N2 influenza virus possessing human H5N1 internal genomes has been circulating in poultry in eastern China since 1998
    • Zhang P., Tang Y., Liu X., Liu W., Zhang X., Liu H., Peng D., Gao S., Wu Y., Zhang L., Lu S., Liu X. A novel genotype H9N2 influenza virus possessing human H5N1 internal genomes has been circulating in poultry in eastern China since 1998. J. Virol. 2009, 83:8428-8438.
    • (2009) J. Virol. , vol.83 , pp. 8428-8438
    • Zhang, P.1    Tang, Y.2    Liu, X.3    Liu, W.4    Zhang, X.5    Liu, H.6    Peng, D.7    Gao, S.8    Wu, Y.9    Zhang, L.10    Lu, S.11    Liu, X.12
  • 58
    • 84864003834 scopus 로고    scopus 로고
    • A single amino acid at the hemagglutinin cleavage site contributes to the pathogenicity and neurovirulence of H5N1 influenza virus in mice
    • Zhang Y., Sun Y., Sun H., Pu J., Bi Y., Shi Y., Lu X., Li J., Zhu Q., Gao G.F., Yang H., Liu J. A single amino acid at the hemagglutinin cleavage site contributes to the pathogenicity and neurovirulence of H5N1 influenza virus in mice. J. Virol. 2012, 86:6924-6931.
    • (2012) J. Virol. , vol.86 , pp. 6924-6931
    • Zhang, Y.1    Sun, Y.2    Sun, H.3    Pu, J.4    Bi, Y.5    Shi, Y.6    Lu, X.7    Li, J.8    Zhu, Q.9    Gao, G.F.10    Yang, H.11    Liu, J.12


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.