-
1
-
-
78649742020
-
MRNA-specific regulation of translation by poly(A)-binding proteins
-
H.M. Burgess, and N.K. Gray MRNA-specific regulation of translation by poly(A)-binding proteins Biochem. Soc. Trans. 38 2010 1517 1522
-
(2010)
Biochem. Soc. Trans.
, vol.38
, pp. 1517-1522
-
-
Burgess, H.M.1
Gray, N.K.2
-
3
-
-
0038063499
-
Xenopus Poly(A) Binding protein: Functional domains in RNA binding and protein-protein interaction
-
U. Kühn, and T. Pieler Xenopus Poly(A) Binding protein: functional domains in RNA binding and protein-protein interaction J. Mol. Biol. 256 1996 20 30
-
(1996)
J. Mol. Biol.
, vol.256
, pp. 20-30
-
-
Kühn, U.1
Pieler, T.2
-
4
-
-
0031591391
-
Differential effects of aromatic and charged residue substitutions in the RNA binding domains of the yeast poly(A)-binding protein
-
J.A. Deardorff, and A.B. Sachs Differential effects of aromatic and charged residue substitutions in the RNA binding domains of the yeast poly(A)-binding protein J. Mol. Biol. 269 1997 67 81
-
(1997)
J. Mol. Biol.
, vol.269
, pp. 67-81
-
-
Deardorff, J.A.1
Sachs, A.B.2
-
5
-
-
0036096544
-
Paip1 interacts with poly(A) binding protein through two independent binding motifs
-
G. Roy, G. De Crescenzo, K. Khaleghpour, A. Kahvejian, M. O'Connor-McCourt, and N. Sonenberg Paip1 interacts with poly(A) binding protein through two independent binding motifs Mol. Cell. Biol. 22 2002 3769 3782
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 3769-3782
-
-
Roy, G.1
De Crescenzo, G.2
Khaleghpour, K.3
Kahvejian, A.4
O'Connor-Mccourt, M.5
Sonenberg, N.6
-
6
-
-
0035109013
-
Translational repression by a novel partner of human poly(A) binding protein, Paip2
-
K. Khaleghpour, Y.V. Svitkin, A.W. Craig, C.T. DeMaria, R.C. Deo, S.K. Burley, and N. Sonenberg Translational repression by a novel partner of human poly(A) binding protein, Paip2 Mol. Cell 7 2001 205 216
-
(2001)
Mol. Cell
, vol.7
, pp. 205-216
-
-
Khaleghpour, K.1
Svitkin, Y.V.2
Craig, A.W.3
Demaria, C.T.4
Deo, R.C.5
Burley, S.K.6
Sonenberg, N.7
-
7
-
-
0031972645
-
RNA recognition motif 2 of yeast Pab1p is required for its functional interaction with eukaryotic translation initiation factor 4G
-
S.H. Kessler, and A.B. Sachs RNA recognition motif 2 of yeast Pab1p is required for its functional interaction with eukaryotic translation initiation factor 4G Mol. Cell. Biol. 18 1998 51 57
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 51-57
-
-
Kessler, S.H.1
Sachs, A.B.2
-
8
-
-
17644391054
-
Interaction of paxillin with poly(A)-binding protein 1 and its role in focal adhesion turnover and cell migration
-
A.J. Woods, T. Kantidakis, H. Sabe, D.R. Critchley, and J.C. Norman Interaction of paxillin with poly(A)-binding protein 1 and its role in focal adhesion turnover and cell migration Mol. Cell. Biol. 25 2005 3763 3773
-
(2005)
Mol. Cell. Biol.
, vol.25
, pp. 3763-3773
-
-
Woods, A.J.1
Kantidakis, T.2
Sabe, H.3
Critchley, D.R.4
Norman, J.C.5
-
9
-
-
11844270415
-
Yeast poly(A)-binding protein, Pab1, and PAN, a poly(A) nuclease complex recruited by Pab1, connect mRNA biogenesis to export
-
E.F. Dunn, C.M. Hammell, C.A. Hodge, and C.N. Cole Yeast poly(A)-binding protein, Pab1, and PAN, a poly(A) nuclease complex recruited by Pab1, connect mRNA biogenesis to export Genes Dev. 19 2005 90 103
-
(2005)
Genes Dev.
, vol.19
, pp. 90-103
-
-
Dunn, E.F.1
Hammell, C.M.2
Hodge, C.A.3
Cole, C.N.4
-
10
-
-
15444366645
-
Yeast poly(A)-binding protein Pab1 shuttles between the nucleus and the cytoplasm and functions in mRNA export
-
C. Brune, S.E. Munchel, N. Fischer, A.V. Podtelejnikov, and K. Weis Yeast poly(A)-binding protein Pab1 shuttles between the nucleus and the cytoplasm and functions in mRNA export RNA 11 2005 517 531
-
(2005)
RNA
, vol.11
, pp. 517-531
-
-
Brune, C.1
Munchel, S.E.2
Fischer, N.3
Podtelejnikov, A.V.4
Weis, K.5
-
11
-
-
0023405161
-
A single domain of yeast poly(A)-binding protein is necessary and sufficient for RNA binding and cell viability
-
A.B. Sachs, R.W. Davis, and R.D. Kornberg A single domain of yeast poly(A)-binding protein is necessary and sufficient for RNA binding and cell viability Mol. Cell. Biol. 7 1987 3268 3276
-
(1987)
Mol. Cell. Biol.
, vol.7
, pp. 3268-3276
-
-
Sachs, A.B.1
Davis, R.W.2
Kornberg, R.D.3
-
12
-
-
84855911694
-
The multifunctional poly(A)-binding protein (PABP) 1 is subject to extensive dynamic post-translational modification, which molecular modelling suggests plays an important role in co-ordinating its activities
-
M. Brooks, L. McCracken, J.P. Reddington, Z.L. Lu, N.A. Morrice, and N.K. Gray The multifunctional poly(A)-binding protein (PABP) 1 is subject to extensive dynamic post-translational modification, which molecular modelling suggests plays an important role in co-ordinating its activities Biochem. J. 441 2012 803 812
-
(2012)
Biochem. J.
, vol.441
, pp. 803-812
-
-
Brooks, M.1
McCracken, L.2
Reddington, J.P.3
Lu, Z.L.4
Morrice, N.A.5
Gray, N.K.6
-
13
-
-
49449085504
-
A quantitative atlas of mitotic phosphorylation
-
N. Dephoure, C. Zhou, J. Villén, S.A. Beausoleil, C.E. Bakalarski, S.J. Elledge, and S.P. Gygi A quantitative atlas of mitotic phosphorylation Proc. Nat. Acad. Sci. 105 2008 10762 10767
-
(2008)
Proc. Nat. Acad. Sci.
, vol.105
, pp. 10762-10767
-
-
Dephoure, N.1
Zhou, C.2
Villén, J.3
Beausoleil, S.A.4
Bakalarski, C.E.5
Elledge, S.J.6
Gygi, S.P.7
-
14
-
-
77951644400
-
Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis
-
J.V. Olsen, M. Vermeulen, A. Santamaria, C. Kumar, M.L. Miller, L.J. Jensen, F. Gnad, J. Cox, T.S. Jensen, E.A. Nigg, S. Brunak, and M. Mann Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis Sci. Signal. 3 2010 ra3
-
(2010)
Sci. Signal.
, vol.3
, pp. 3
-
-
Olsen, J.V.1
Vermeulen, M.2
Santamaria, A.3
Kumar, C.4
Miller, M.L.5
Jensen, L.J.6
Gnad, F.7
Cox, J.8
Jensen, T.S.9
Nigg, E.A.10
Brunak, S.11
Mann, M.12
-
15
-
-
0034610814
-
The language of covalent histone modifications
-
B.D. Strahl, and C.D. Allis The language of covalent histone modifications Nature 403 2000 41 45
-
(2000)
Nature
, vol.403
, pp. 41-45
-
-
Strahl, B.D.1
Allis, C.D.2
-
16
-
-
84875498382
-
Regulation of molecular chaperones through post-translational modifications: Decrypting the chaperone code
-
P. Cloutier, and B. Coulombe Regulation of molecular chaperones through post-translational modifications: decrypting the chaperone code Biochim. Biophys. Acta, Gene Regul. Mech. 1829 2013 443 454
-
(2013)
Biochim. Biophys. Acta, Gene Regul. Mech.
, vol.1829
, pp. 443-454
-
-
Cloutier, P.1
Coulombe, B.2
-
17
-
-
65149105339
-
A post-translational modification code for transcription factors: Sorting through a sea of signals
-
B.A. Benayoun, and R.A. Veitia A post-translational modification code for transcription factors: sorting through a sea of signals Trends Cell Biol. 19 2009 189 197
-
(2009)
Trends Cell Biol.
, vol.19
, pp. 189-197
-
-
Benayoun, B.A.1
Veitia, R.A.2
-
18
-
-
84883805433
-
Analysis of the Proteome of Saccharomyces cerevisiae for Methylarginine
-
J.K.K. Low, G. Hart-Smith, M.A. Erce, and M.R. Wilkins Analysis of the Proteome of Saccharomyces cerevisiae for Methylarginine Journal of Proteome Research 12 9 2013 3884 3899
-
(2013)
Journal of Proteome Research
, vol.12
, Issue.9
, pp. 3884-3899
-
-
Low, J.K.K.1
Hart-Smith, G.2
Erce, M.A.3
Wilkins, M.R.4
-
19
-
-
28444478789
-
Biochemical and genetic analysis of the yeast proteome with a movable ORF collection
-
D.M. Gelperin, M.A. White, M.L. Wilkinson, Y. Kon, L.A. Kung, K.J. Wise, N. Lopez-Hoyo, L. Jiang, S. Piccirillo, H. Yu, M. Gerstein, M.E. Dumont, E.M. Phizicky, M. Snyder, and E.J. Grayhack Biochemical and genetic analysis of the yeast proteome with a movable ORF collection Genes Dev. 19 2005 2816 2826
-
(2005)
Genes Dev.
, vol.19
, pp. 2816-2826
-
-
Gelperin, D.M.1
White, M.A.2
Wilkinson, M.L.3
Kon, Y.4
Kung, L.A.5
Wise, K.J.6
Lopez-Hoyo, N.7
Jiang, L.8
Piccirillo, S.9
Yu, H.10
Gerstein, M.11
Dumont, M.E.12
Phizicky, E.M.13
Snyder, M.14
Grayhack, E.J.15
-
20
-
-
84865804286
-
Enhanced methylarginine characterization by post-translational modification-specific targeted data acquisition and electron-transfer dissociation mass spectrometry
-
G. Hart-Smith, J.K. Low, M.A. Erce, and M.R. Wilkins Enhanced methylarginine characterization by post-translational modification-specific targeted data acquisition and electron-transfer dissociation mass spectrometry J. Am. Soc. Mass Spectrom. 23 2012 1376 1389
-
(2012)
J. Am. Soc. Mass Spectrom.
, vol.23
, pp. 1376-1389
-
-
Hart-Smith, G.1
Low, J.K.2
Erce, M.A.3
Wilkins, M.R.4
-
21
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
J.D. Thompson, D.G. Higgins, and T.J. Gibson CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res. 22 1994 4673 4680
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
22
-
-
44449117052
-
Identification and validation of eukaryotic aspartate and glutamate methylation in proteins
-
R. Sprung, Y. Chen, K. Zhang, D. Cheng, T. Zhang, J. Peng, and Y. Zhao Identification and validation of eukaryotic aspartate and glutamate methylation in proteins J. Proteome Res. 7 2008 1001 1006
-
(2008)
J. Proteome Res.
, vol.7
, pp. 1001-1006
-
-
Sprung, R.1
Chen, Y.2
Zhang, K.3
Cheng, D.4
Zhang, T.5
Peng, J.6
Zhao, Y.7
-
23
-
-
0036652176
-
Histone acetylation and deacetylation: Identification of acetylation and methylation sites of HeLa Histone H4 by mass spectrometry
-
K. Zhang, K.E. Williams, L. Huang, P. Yau, J.S. Siino, E.M. Bradbury, P.R. Jones, M.J. Minch, and A.L. Burlingame Histone acetylation and deacetylation: identification of acetylation and methylation sites of HeLa Histone H4 by mass spectrometry Mol. Cell. Proteomics 1 2002 500 508
-
(2002)
Mol. Cell. Proteomics
, vol.1
, pp. 500-508
-
-
Zhang, K.1
Williams, K.E.2
Huang, L.3
Yau, P.4
Siino, J.S.5
Bradbury, E.M.6
Jones, P.R.7
Minch, M.J.8
Burlingame, A.L.9
-
24
-
-
68549085023
-
High-accuracy identification and bioinformatic analysis of in vivo protein phosphorylation sites in yeast
-
F. Gnad, L.M.F. de Godoy, J. Cox, N. Neuhauser, S. Ren, J.V. Olsen, and M. Mann High-accuracy identification and bioinformatic analysis of in vivo protein phosphorylation sites in yeast Proteomics 9 2009 4642 4652
-
(2009)
Proteomics
, vol.9
, pp. 4642-4652
-
-
Gnad, F.1
De Godoy, L.M.F.2
Cox, J.3
Neuhauser, N.4
Ren, S.5
Olsen, J.V.6
Mann, M.7
-
25
-
-
57449105428
-
PhosphoPep[mdash]a database of protein phosphorylation sites in model organisms
-
B. Bodenmiller, D. Campbell, B. Gerrits, H. Lam, M. Jovanovic, P. Picotti, R. Schlapbach, and R. Aebersold PhosphoPep[mdash]a database of protein phosphorylation sites in model organisms Nat. Biotechnol. 26 2008 1339 1340
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 1339-1340
-
-
Bodenmiller, B.1
Campbell, D.2
Gerrits, B.3
Lam, H.4
Jovanovic, M.5
Picotti, P.6
Schlapbach, R.7
Aebersold, R.8
-
26
-
-
78651320816
-
Phospho.ELM: A database of phosphorylation sites - Update 2011
-
H. Dinkel, C. Chica, A. Via, C.M. Gould, L.J. Jensen, T.J. Gibson, and F. Diella Phospho.ELM: a database of phosphorylation sites - update 2011 Nucleic Acids Research 39 2010 261 267
-
(2010)
Nucleic Acids Research
, vol.39
, pp. 261-267
-
-
Dinkel, H.1
Chica, C.2
Via, A.3
Gould, C.M.4
Jensen, L.J.5
Gibson, T.J.6
Diella, F.7
-
27
-
-
78651277460
-
PHOSIDA 2011: The posttranslational modification database
-
F. Gnad, J. Gunawardena, and M. Mann PHOSIDA 2011: the posttranslational modification database Nucleic Acids Res. 39 2011 2011 D253 D260
-
(2011)
Nucleic Acids Res.
, vol.39
, Issue.2011
-
-
Gnad, F.1
Gunawardena, J.2
Mann, M.3
-
28
-
-
0021891879
-
Protein carboxyl methyltransferases: Two distinct classes of enzymes
-
S. Clarke Protein carboxyl methyltransferases: two distinct classes of enzymes Annu. Rev. Biochem. 54 1985 479 506
-
(1985)
Annu. Rev. Biochem.
, vol.54
, pp. 479-506
-
-
Clarke, S.1
-
29
-
-
0031749947
-
Chemotaxis receptor recognition by protein methyltransferase CheR
-
S. Djordjevic, and A.M. Stock Chemotaxis receptor recognition by protein methyltransferase CheR Nat. Struct. Biol. 5 1998 446 450
-
(1998)
Nat. Struct. Biol.
, vol.5
, pp. 446-450
-
-
Djordjevic, S.1
Stock, A.M.2
-
30
-
-
84870561934
-
Protein arginine methylation in Saccharomyces cerevisiae
-
J.K.K. Low, and M.R. Wilkins Protein arginine methylation in Saccharomyces cerevisiae FEBS J. 279 2012 4423 4443
-
(2012)
FEBS J.
, vol.279
, pp. 4423-4443
-
-
Low, J.K.K.1
Wilkins, M.R.2
-
31
-
-
84876735200
-
Protein methylation at the surface and buried deep: Thinking outside the histone box
-
S.G. Clarke Protein methylation at the surface and buried deep: thinking outside the histone box Trends Biochem. Sci. 38 2013 243 252
-
(2013)
Trends Biochem. Sci.
, vol.38
, pp. 243-252
-
-
Clarke, S.G.1
-
32
-
-
79961238034
-
Comprehensive structural and substrate specificity classification of the Saccharomyces cerevisiae methyltransferome
-
T. Wlodarski, J. Kutner, J. Towpik, L. Knizewski, L. Rychlewski, A. Kudlicki, M. Rowicka, A. Dziembowski, and K. Ginalski Comprehensive structural and substrate specificity classification of the Saccharomyces cerevisiae methyltransferome PLoS ONE 6 2011 e23168
-
(2011)
PLoS ONE
, vol.6
, pp. 23168
-
-
Wlodarski, T.1
Kutner, J.2
Towpik, J.3
Knizewski, L.4
Rychlewski, L.5
Kudlicki, A.6
Rowicka, M.7
Dziembowski, A.8
Ginalski, K.9
-
34
-
-
28044471827
-
Acetylation and deacetylation of non-histone proteins
-
M.A. Glozak, N. Sengupta, X.H. Zhang, and E. Seto Acetylation and deacetylation of non-histone proteins Gene 363 2005 15 23
-
(2005)
Gene
, vol.363
, pp. 15-23
-
-
Glozak, M.A.1
Sengupta, N.2
Zhang, X.H.3
Seto, E.4
-
35
-
-
0034051227
-
Acetylation of histones and transcription-related factors
-
D.E. Sterner, and S.L. Berger Acetylation of histones and transcription-related factors Microbiol. Mol. Biol. Rev. 64 2000 435
-
(2000)
Microbiol. Mol. Biol. Rev.
, vol.64
, pp. 435
-
-
Sterner, D.E.1
Berger, S.L.2
-
38
-
-
84887048938
-
Interactions affected by arginine methylation in the yeast protein-protein interaction network
-
M.A. Erce, D. Abeygunawardena, J.K.K. Low, G. Hart-Smith, and M.R. Wilkins Interactions affected by arginine methylation in the yeast protein-protein interaction network Molecular & Cellular Proteomics 12 4-5 2013 564 586
-
(2013)
Molecular & Cellular Proteomics
, vol.12
, Issue.45
, pp. 564-586
-
-
Erce, M.A.1
Abeygunawardena, D.2
Low, J.K.K.3
Hart-Smith, G.4
Wilkins, M.R.5
|