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Volumn 11, Issue 12, 2013, Pages 5008-5023

Biosynthesis of polyunsaturated fatty acids in the oleaginous marine diatom Fistulifera sp. strain JPCC DA0580

Author keywords

Desaturase; Eicosapentaenoic acid; Fistulifera sp. JPCC DA0580; Marine oleaginous diatom; Polyunsatulated fatty acid

Indexed keywords

DESATURASE; ELONGASE; ENZYME; ICOSAPENTAENOIC ACID; POLYUNSATURATED FATTY ACID; UNCLASSIFIED DRUG;

EID: 84892428523     PISSN: None     EISSN: 16603397     Source Type: Journal    
DOI: 10.3390/md11125008     Document Type: Article
Times cited : (29)

References (38)
  • 1
    • 43549102657 scopus 로고    scopus 로고
    • Microalgal triacylglycerols as feedstocks for biofuel production: Perspectives and advances
    • Hu, Q.; Sommerfeld, M.; Jarvis, E.; Ghirardi, M.; Posewitz, M.; Seibert, M.; Darzins, A. Microalgal triacylglycerols as feedstocks for biofuel production: Perspectives and advances. Plant J. 2008, 54, 621-639.
    • (2008) Plant J. , vol.54 , pp. 621-639
    • Hu, Q.1    Sommerfeld, M.2    Jarvis, E.3    Ghirardi, M.4    Posewitz, M.5    Seibert, M.6    Darzins, A.7
  • 2
    • 33947617349 scopus 로고    scopus 로고
    • Biodiesel from microalgae
    • Chisti, Y. Biodiesel from microalgae. Biotechnol. Adv. 2007, 25, 294-306.
    • (2007) Biotechnol. Adv. , vol.25 , pp. 294-306
    • Chisti, Y.1
  • 3
    • 0026532402 scopus 로고
    • Modification of Brassica seed oil by antisense expression of a stearoyl-acyl carrier protein desaturase gene
    • Knutzon, D.S.; Thompson, G.A.; Radke, S.E.; Johnson, W.B.; Knauf, V.C.; Kridl, J.C. Modification of Brassica seed oil by antisense expression of a stearoyl-acyl carrier protein desaturase gene. Proc. Natl. Acad. Sci. USA 1992, 89, 2624-2628.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 2624-2628
    • Knutzon, D.S.1    Thompson, G.A.2    Radke, S.E.3    Johnson, W.B.4    Knauf, V.C.5    Kridl, J.C.6
  • 4
    • 79952614685 scopus 로고    scopus 로고
    • Silencing genes encoding omega-3 fatty acid desaturase alters seed size and accumulation of bean pod mottle virus in soybean
    • Singh, A.K.; Fu, D.Q.; El-Habbak, M.; Navarre, D.; Ghabrial, S.; Kachroo, A. Silencing genes encoding omega-3 fatty acid desaturase alters seed size and accumulation of bean pod mottle virus in soybean. Mol. Plant. Microbe Interact. 2011, 24, 506-515.
    • (2011) Mol. Plant. Microbe Interact. , vol.24 , pp. 506-515
    • Singh, A.K.1    Fu, D.Q.2    El-Habbak, M.3    Navarre, D.4    Ghabrial, S.5    Kachroo, A.6
  • 5
    • 0037008205 scopus 로고    scopus 로고
    • High-stearic and high-oleic cottonseed oils produced by hairpin RNA-mediated post-transcriptional gene silencing
    • Liu, Q.; Singh, S.P.; Green, A.G. High-stearic and high-oleic cottonseed oils produced by hairpin RNA-mediated post-transcriptional gene silencing. Plant Physiol. 2002, 129, 1732-1743.
    • (2002) Plant Physiol. , vol.129 , pp. 1732-1743
    • Liu, Q.1    Singh, S.P.2    Green, A.G.3
  • 6
    • 0028140687 scopus 로고
    • Biosynthesis of polyunsaturated fatty acids in the marine diatom, Phaeodactylum tricornutum
    • Arao, T.; Yamada, M. Biosynthesis of polyunsaturated fatty acids in the marine diatom, Phaeodactylum tricornutum. Phytochemistry 1994, 35, 1177-1181.
    • (1994) Phytochemistry , vol.35 , pp. 1177-1181
    • Arao, T.1    Yamada, M.2
  • 7
    • 0030479871 scopus 로고    scopus 로고
    • Biosynthesis of eicosapentaenoic acid in the microalga Porphyridium cruentum. I. The use of externally supplied fatty acids
    • Shiran, D.; Khozin, I.; Heimer, Y.M.; Cohen, Z. Biosynthesis of eicosapentaenoic acid in the microalga Porphyridium cruentum. I. The use of externally supplied fatty acids. Lipids 1996, 31, 1277-1282.
    • (1996) Lipids , vol.31 , pp. 1277-1282
    • Shiran, D.1    Khozin, I.2    Heimer, Y.M.3    Cohen, Z.4
  • 8
    • 0031407815 scopus 로고    scopus 로고
    • Elucidation of the biosynthesis of eicosapentaenoic acid in the microalga Porphyridium cruentum (II. Studies with radiolabeled precursors)
    • Khozin, I.; Adlerstein, D.; Bigongo, C.; Heimer, Y.M.; Cohen, Z. Elucidation of the biosynthesis of eicosapentaenoic acid in the microalga Porphyridium cruentum (II. Studies with radiolabeled precursors). Plant Physiol. 1997, 114, 223-230.
    • (1997) Plant Physiol. , vol.114 , pp. 223-230
    • Khozin, I.1    Adlerstein, D.2    Bigongo, C.3    Heimer, Y.M.4    Cohen, Z.5
  • 9
    • 84858234698 scopus 로고    scopus 로고
    • The omega-3 fatty acid nutritional landscape: Health benefits and sources
    • Deckelbaum, R.J.; Torrejon, C. The omega-3 fatty acid nutritional landscape: Health benefits and sources. J. Nutr. 2012, 142, 587S-591S.
    • (2012) J. Nutr. , vol.142
    • Deckelbaum, R.J.1    Torrejon, C.2
  • 10
    • 0001533532 scopus 로고
    • Positional distribution of fatty acids in lipids of the marine diatom Phaeodactylum tricornutum
    • Arao, T.; Kawaguchi, A.; Yamada, M. Positional distribution of fatty acids in lipids of the marine diatom Phaeodactylum tricornutum. Phytochemistry 1987, 26, 2573-2576.
    • (1987) Phytochemistry , vol.26 , pp. 2573-2576
    • Arao, T.1    Kawaguchi, A.2    Yamada, M.3
  • 12
    • 84878801801 scopus 로고    scopus 로고
    • Highly efficient transformation of the diatom Phaeodactylum tricornutum by multi-pulse electroporation
    • Miyahara, M.; Aoi, M.; Inoue-Kashino, N.; Kashino, Y.; Ifuku, K. Highly efficient transformation of the diatom Phaeodactylum tricornutum by multi-pulse electroporation. Biosci. Biotechnol. Biochem. 2013, 77, 874-876.
    • (2013) Biosci. Biotechnol. Biochem. , vol.77 , pp. 874-876
    • Miyahara, M.1    Aoi, M.2    Inoue-Kashino, N.3    Kashino, Y.4    Ifuku, K.5
  • 13
    • 0029966913 scopus 로고    scopus 로고
    • Stable nuclear transformation of the diatom Phaeodactylum tricornutum
    • Apt, K.E.; Kroth-Pancic, P.G.; Grossman, A.R. Stable nuclear transformation of the diatom Phaeodactylum tricornutum. Mol. Gen. Genet. 1996, 252, 572-579.
    • (1996) Mol. Gen. Genet. , vol.252 , pp. 572-579
    • Apt, K.E.1    Kroth-Pancic, P.G.2    Grossman, A.R.3
  • 14
    • 77953006433 scopus 로고    scopus 로고
    • Marine diatom, Navicula sp. Strain JPCC DA0580 and marine green alga, Chlorella sp. Strain NKG400014 as potential sources for biodiesel production
    • Matsumoto, M.; Sugiyama, H.; Maeda, Y.; Sato, R.; Tanaka, T.; Matsunaga, T. Marine diatom, Navicula sp. strain JPCC DA0580 and marine green alga, Chlorella sp. strain NKG400014 as potential sources for biodiesel production. Appl. Biochem. Biotechnol. 2010, 161, 483-490.
    • (2010) Appl. Biochem. Biotechnol. , vol.161 , pp. 483-490
    • Matsumoto, M.1    Sugiyama, H.2    Maeda, Y.3    Sato, R.4    Tanaka, T.5    Matsunaga, T.6
  • 15
    • 84856969504 scopus 로고    scopus 로고
    • High-throughput pyrosequencing of the chloroplast genome of a highly neutral-lipid-producing marine pennate diatom, Fistulifera sp. Strain JPCC DA0580
    • Tanaka, T.; Fukuda, Y.; Yoshino, T.; Maeda, Y.; Muto, M.; Matsumoto, M.; Mayama, S.; Matsunaga, T. High-throughput pyrosequencing of the chloroplast genome of a highly neutral-lipid-producing marine pennate diatom, Fistulifera sp. strain JPCC DA0580. Photosynth. Res. 2011, 109, 223-229.
    • (2011) Photosynth. Res. , vol.109 , pp. 223-229
    • Tanaka, T.1    Fukuda, Y.2    Yoshino, T.3    Maeda, Y.4    Muto, M.5    Matsumoto, M.6    Mayama, S.7    Matsunaga, T.8
  • 16
    • 84887219935 scopus 로고    scopus 로고
    • Proteomics analysis of oil body-associated proteins in the oleaginous diatom
    • Nojima, D.; Yoshino, T.; Maeda, Y.; Tanaka, M.; Nemoto, M.; Tanaka, T. Proteomics analysis of oil body-associated proteins in the oleaginous diatom. J. Proteome Res. 2013, 12, 5293-5301.
    • (2013) J. Proteome Res. , vol.12 , pp. 5293-5301
    • Nojima, D.1    Yoshino, T.2    Maeda, Y.3    Tanaka, M.4    Nemoto, M.5    Tanaka, T.6
  • 17
    • 84871671171 scopus 로고    scopus 로고
    • Establishment of a genetic transformation system for the marine pennate diatom Fistulifera sp. Strain JPCC DA0580 - A high triglyceride producer
    • Muto, M.; Fukuda, Y.; Nemoto, M.; Yoshino, T.; Matsunaga, T.; Tanaka, T. Establishment of a genetic transformation system for the marine pennate diatom Fistulifera sp. strain JPCC DA0580 - A high triglyceride producer. Mar. Biotechnol. 2013, 15, 48-55.
    • (2013) Mar. Biotechnol. , vol.15 , pp. 48-55
    • Muto, M.1    Fukuda, Y.2    Nemoto, M.3    Yoshino, T.4    Matsunaga, T.5    Tanaka, T.6
  • 18
    • 73049174685 scopus 로고
    • Studies of marine planktonic diatoms. I. Cyclotella nana Hustedt, and Detonula confervacea (cleve)
    • Guillard, R.R.; Ryther, J.H. Studies of marine planktonic diatoms. I. Cyclotella nana Hustedt, and Detonula confervacea (cleve) Gran. Can. J. Microbiol. 1962, 8, 229-239.
    • (1962) Gran. Can. J. Microbiol. , vol.8 , pp. 229-239
    • Guillard, R.R.1    Ryther, J.H.2
  • 20
    • 0034697980 scopus 로고    scopus 로고
    • Predicting subcellular localization of proteins based on their N-terminal amino acid sequence
    • Emanuelsson, O.; Nielsen, H.; Brunak, S.; von Heijne, G. Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. J. Mol. Biol. 2000, 300, 1005-1016.
    • (2000) J. Mol. Biol. , vol.300 , pp. 1005-1016
    • Emanuelsson, O.1    Nielsen, H.2    Brunak, S.3    Von Heijne, G.4
  • 21
    • 54049114680 scopus 로고    scopus 로고
    • HECTAR: A method to predict subcellular targeting in heterokonts
    • doi:10.1186/1471-2105-9-393
    • Gschloessl, B.; Guermeur, Y.; Cock, J.M. HECTAR: A method to predict subcellular targeting in heterokonts. BMC Bioinf. 2008, 9, doi:10.1186/1471- 2105-9-393.
    • (2008) BMC Bioinf. , vol.9
    • Gschloessl, B.1    Guermeur, Y.2    Cock, J.M.3
  • 24
    • 34250179494 scopus 로고    scopus 로고
    • Protein targeting into complex diatom plastids: Functional characterisation of a specific targeting motif
    • Gruber, A.; Vugrinec, S.; Hempel, F.; Gould, S.B.; Maier, U.-G.; Kroth, P.G. Protein targeting into complex diatom plastids: Functional characterisation of a specific targeting motif. Plant Mol. Biol. 2007, 64, 519-530.
    • (2007) Plant Mol. Biol. , vol.64 , pp. 519-530
    • Gruber, A.1    Vugrinec, S.2    Hempel, F.3    Gould, S.B.4    Maier, U.-G.5    Kroth, P.G.6
  • 25
    • 0029915525 scopus 로고    scopus 로고
    • Computational method to predict mitochondrially imported proteins and their targeting sequences
    • Claros, M.G.; Vincens, P. Computational method to predict mitochondrially imported proteins and their targeting sequences. Eur. J. Biochem. 1996, 241, 779-786.
    • (1996) Eur. J. Biochem. , vol.241 , pp. 779-786
    • Claros, M.G.1    Vincens, P.2
  • 27
    • 0035910270 scopus 로고    scopus 로고
    • Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
    • Krogh, A.; Larsson, B.; von Heijne, G.; Sonnhammer, E.L. Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes. J. Mol. Biol. 2001, 305, 567-580.
    • (2001) J. Mol. Biol. , vol.305 , pp. 567-580
    • Krogh, A.1    Larsson, B.2    Von Heijne, G.3    Sonnhammer, E.L.4
  • 29
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead, B.; Trapnell, C.; Pop, M.; Salzberg, S.L. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 2009, 10, R25.
    • (2009) Genome Biol. , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 30
    • 67650721347 scopus 로고    scopus 로고
    • CateGOrizer: A web-based program to batch analyze gene ontology classification categories
    • Zhi-Liang, H.; Bao, J.; Reecy, J. CateGOrizer: A web-based program to batch analyze gene ontology classification categories. Online J. Bioinf. 2008, 9, 108-112.
    • (2008) Online J. Bioinf. , vol.9 , pp. 108-112
    • Zhi-Liang, H.1    Bao, J.2    Reecy, J.3
  • 32
    • 0031659941 scopus 로고    scopus 로고
    • Structure and expression of fatty acid desaturases
    • Los, D.A.; Murata, N. Structure and expression of fatty acid desaturases. Biochim. Biophys. Acta 1998, 1394, 3-15.
    • (1998) Biochim. Biophys. Acta , vol.1394 , pp. 3-15
    • Los, D.A.1    Murata, N.2
  • 33
    • 38149037201 scopus 로고    scopus 로고
    • The repertoire of desaturases and elongases reveals fatty acid variations in 56 eukaryotic genomes
    • Hashimoto, K.; Yoshizawa, A.C.; Okuda, S.; Kuma, K.; Goto, S.; Kanehisa, M. The repertoire of desaturases and elongases reveals fatty acid variations in 56 eukaryotic genomes. J. Lipid Res. 2008, 49, 183-191.
    • (2008) J. Lipid Res.
    • Hashimoto, K.1    Yoshizawa, A.C.2    Okuda, S.3    Kuma, K.4    Goto, S.5    Kanehisa, M.6
  • 34
    • 84883497872 scopus 로고    scopus 로고
    • Identification and functional analysis of delta-9 desaturase, a key enzyme in PUFA synthesis, isolated from the oleaginous diatom Fistulifera
    • Muto, M.; Kubota, C.; Tanaka, M.; Satoh, A.; Matsumoto, M.; Yoshino, T.; Tanaka, T. Identification and functional analysis of delta-9 desaturase, a key enzyme in PUFA synthesis, isolated from the oleaginous diatom Fistulifera. PLoS One 2013, 8, e73507.
    • (2013) PLoS One , vol.8
    • Muto, M.1    Kubota, C.2    Tanaka, M.3    Satoh, A.4    Matsumoto, M.5    Yoshino, T.6    Tanaka, T.7
  • 35
    • 0037392456 scopus 로고    scopus 로고
    • New insight into Phaeodactylum tricornutum fatty acid metabolism. Cloning and functional characterization of plastidial and microsomal delta12-fatty acid desaturases
    • Domergue, F.; Spiekermann, P.; Lerchl, J.; Beckmann, C.; Kilian, O.; Kroth, P.G.; Boland, W.; Zahringer, U.; Heinz, E. New insight into Phaeodactylum tricornutum fatty acid metabolism. Cloning and functional characterization of plastidial and microsomal delta12-fatty acid desaturases. Plant Physiol. 2003, 131, 1648-1660.
    • (2003) Plant Physiol. , vol.131 , pp. 1648-1660
    • Domergue, F.1    Spiekermann, P.2    Lerchl, J.3    Beckmann, C.4    Kilian, O.5    Kroth, P.G.6    Boland, W.7    Zahringer, U.8    Heinz, E.9
  • 36
    • 0036040288 scopus 로고    scopus 로고
    • Cloning and functional characterization of Phaeodactylum tricornutum front-end desaturases involved in eicosapentaenoic acid biosynthesis
    • Domergue, F.; Lerchl, J.; Zähringer, U.; Heinz, E. Cloning and functional characterization of Phaeodactylum tricornutum front-end desaturases involved in eicosapentaenoic acid biosynthesis. Eur. J. Biochem. 2002, 269, 4105-4113.
    • (2002) Eur. J. Biochem. , vol.269 , pp. 4105-4113
    • Domergue, F.1    Lerchl, J.2    Zähringer, U.3    Heinz, E.4
  • 37
    • 84876305773 scopus 로고    scopus 로고
    • A process design and productivity evaluation for oil production by indoor mass cultivation of a marine diatom, Fistulifera sp. JPCC DA0580
    • Satoh, A.; Ichii, K.; Matsumoto, M.; Kubota, C.; Nemoto, M.; Tanaka, M.; Yoshino, T.; Matsunaga, T.; Tanaka, T. A process design and productivity evaluation for oil production by indoor mass cultivation of a marine diatom, Fistulifera sp. JPCC DA0580. Bioresour. Technol. 2013, 137, 132-138.
    • (2013) Bioresour. Technol. , vol.137 , pp. 132-138
    • Satoh, A.1    Ichii, K.2    Matsumoto, M.3    Kubota, C.4    Nemoto, M.5    Tanaka, M.6    Yoshino, T.7    Matsunaga, T.8    Tanaka, T.9
  • 38
    • 0030184111 scopus 로고    scopus 로고
    • Differential response of microalgae to the substituted pyridazinone, Sandoz 9785, reveal different pathways in the biosynthesis of eicosapentaenoic acid
    • Khozin, I.; Cohen, Z. Differential response of microalgae to the substituted pyridazinone, Sandoz 9785, reveal different pathways in the biosynthesis of eicosapentaenoic acid. Phytochemistry 1996, 42, 1025-1029.
    • (1996) Phytochemistry , vol.42 , pp. 1025-1029
    • Khozin, I.1    Cohen, Z.2


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