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Volumn 55, Issue 1, 2013, Pages 39-50

Two ubiquitin-like conjugation systems that mediate membrane formation during autophagy

Author keywords

Atg protein; Autophagosome formation; Conjugation; Deconjugation; Ubiquitin like protein

Indexed keywords

UBIQUITIN; UBIQUITIN CONJUGATING ENZYME;

EID: 84892154950     PISSN: 00711365     EISSN: None     Source Type: Journal    
DOI: 10.1042/BSE0550039     Document Type: Article
Times cited : (235)

References (46)
  • 1
    • 67649467294 scopus 로고    scopus 로고
    • Dynamics and diversity in autophagy mechanisms: Lessons from yeast
    • Nakatogawa, H., Suzuki, K., Kamada, Y. and Ohsumi, Y. (2009) Dynamics and diversity in autophagy mechanisms: lessons from yeast. Nat. Rev. Mol. Cell Biol. 10, 458-467
    • (2009) Nat. Rev. Mol. Cell Biol. , vol.10 , pp. 458-467
    • Nakatogawa, H.1    Suzuki, K.2    Kamada, Y.3    Ohsumi, Y.4
  • 4
    • 0034676037 scopus 로고    scopus 로고
    • The reversible modification regulates the membrane-binding state of Apg8/Aut7 essential for autophagy and the cytoplasm to vacuole targeting pathway
    • Kirisako, T., Ichimura, Y., Okada, H., Kabeya, Y., Mizushima, N., Yoshimori, T., Ohsumi, M., Takao, T., Noda, T. and Ohsumi, Y. (2000) The reversible modification regulates the membrane-binding state of Apg8/Aut7 essential for autophagy and the cytoplasm to vacuole targeting pathway. J. Cell Biol. 151, 263-276
    • (2000) J. Cell Biol. , vol.151 , pp. 263-276
    • Kirisako, T.1    Ichimura, Y.2    Okada, H.3    Kabeya, Y.4    Mizushima, N.5    Yoshimori, T.6    Ohsumi, M.7    Takao, T.8    Noda, T.9    Ohsumi, Y.10
  • 10
    • 65249111528 scopus 로고    scopus 로고
    • ATG systems from the protein structural point of view
    • Noda, N.N., Ohsumi, Y. and Inagaki, F. (2009) ATG systems from the protein structural point of view. Chem. Rev. 109, 1587-1598
    • (2009) Chem. Rev. , vol.109 , pp. 1587-1598
    • Noda, N.N.1    Ohsumi, Y.2    Inagaki, F.3
  • 13
    • 33645652024 scopus 로고    scopus 로고
    • Phosphatidylserine in addition to phosphatidylethanolamine is an in vitro target of the mammalian Atg8 modifiers, LC3, GABARAP, and GATE-16
    • Sou, Y.S., Tanida, I., Komatsu, M., Ueno, T. and Kominami, E. (2006) Phosphatidylserine in addition to phosphatidylethanolamine is an in vitro target of the mammalian Atg8 modifiers, LC3, GABARAP, and GATE-16. J. Biol. Chem. 281, 3017-3024
    • (2006) J. Biol. Chem. , vol.281 , pp. 3017-3024
    • Sou, Y.S.1    Tanida, I.2    Komatsu, M.3    Ueno, T.4    Kominami, E.5
  • 14
    • 52049091287 scopus 로고    scopus 로고
    • Physiological pH and acidic phospholipids contribute to substrate specificity in lipidation of Atg8
    • Oh-oka, K., Nakatogawa, H. and Ohsumi, Y. (2008) Physiological pH and acidic phospholipids contribute to substrate specificity in lipidation of Atg8. J. Biol. Chem. 283, 21847-2152
    • (2008) J. Biol. Chem. , vol.283 , pp. 21847-22152
    • Oh-Oka, K.1    Nakatogawa, H.2    Ohsumi, Y.3
  • 16
    • 0035503594 scopus 로고    scopus 로고
    • The preautophagosomal structure organized by concerted functions of APG genes is essential for autophagosome formation
    • Suzuki, K., Kirisako, T., Kamada, Y., Mizushima, N., Noda, T. and Ohsumi, Y. (2001) The preautophagosomal structure organized by concerted functions of APG genes is essential for autophagosome formation. EMBO J. 20, 5971-5981
    • (2001) EMBO J. , vol.20 , pp. 5971-5981
    • Suzuki, K.1    Kirisako, T.2    Kamada, Y.3    Mizushima, N.4    Noda, T.5    Ohsumi, Y.6
  • 18
    • 4644362024 scopus 로고    scopus 로고
    • In vivo and in vitro reconstitution of Atg8 conjugation essential for autophagy
    • Ichimura, Y., Imamura, Y., Emoto, K., Umeda, M., Noda, T. and Ohsumi, Y. (2004) In vivo and in vitro reconstitution of Atg8 conjugation essential for autophagy. J. Biol. Chem. 279, 40584-40592
    • (2004) J. Biol. Chem. , vol.279 , pp. 40584-40592
    • Ichimura, Y.1    Imamura, Y.2    Emoto, K.3    Umeda, M.4    Noda, T.5    Ohsumi, Y.6
  • 19
    • 0033565655 scopus 로고    scopus 로고
    • Apg16p is required for the function of the Apg12p-Apg5p conjugate in the yeast autophagy pathway
    • Mizushima, N., Noda, T. and Ohsumi, Y. (1999) Apg16p is required for the function of the Apg12p-Apg5p conjugate in the yeast autophagy pathway. EMBO J. 18, 3888-3896
    • (1999) EMBO J. , vol.18 , pp. 3888-3896
    • Mizushima, N.1    Noda, T.2    Ohsumi, Y.3
  • 20
    • 70450248450 scopus 로고    scopus 로고
    • Differential involvement of Atg16L1 in Crohn disease and canonical autophagy: Analysis of the organization of the Atg16L1 complex in fibroblasts
    • Fujita, N., Saitoh, T., Kageyama, S., Akira, S., Noda, T. and Yoshimori, T. (2009) Differential involvement of Atg16L1 in Crohn disease and canonical autophagy: analysis of the organization of the Atg16L1 complex in fibroblasts. J. Biol. Chem. 284, 32602-32609
    • (2009) J. Biol. Chem. , vol.284 , pp. 32602-32609
    • Fujita, N.1    Saitoh, T.2    Kageyama, S.3    Akira, S.4    Noda, T.5    Yoshimori, T.6
  • 21
    • 74049140368 scopus 로고    scopus 로고
    • Dimeric coiled-coil structure of Saccharomyces cerevisiae Atg16 and its functional significance in autophagy
    • Fujioka, Y., Noda, N.N., Nakatogawa, H., Ohsumi, Y. and Inagaki, F. (2010) Dimeric coiled-coil structure of Saccharomyces cerevisiae Atg16 and its functional significance in autophagy. J. Biol. Chem. 285, 1508-1515
    • (2010) J. Biol. Chem. , vol.285 , pp. 1508-1515
    • Fujioka, Y.1    Noda, N.N.2    Nakatogawa, H.3    Ohsumi, Y.4    Inagaki, F.5
  • 24
    • 34447099450 scopus 로고    scopus 로고
    • Atg8, a ubiquitin-like protein required for autophagosome formation, mediates membrane tethering and hemifusion
    • Nakatogawa, H., Ichimura, Y. and Ohsumi, Y. (2007) Atg8, a ubiquitin-like protein required for autophagosome formation, mediates membrane tethering and hemifusion. Cell 130, 165-178
    • (2007) Cell , vol.130 , pp. 165-178
    • Nakatogawa, H.1    Ichimura, Y.2    Ohsumi, Y.3
  • 25
    • 47549092694 scopus 로고    scopus 로고
    • Atg8 controls phagophore expansion during autophagosome formation
    • Xie, Z., Nair, U. and Klionsky, D.J. (2008) Atg8 controls phagophore expansion during autophagosome formation. Mol. Biol. Cell 19, 3290-3298
    • (2008) Mol. Biol. Cell , vol.19 , pp. 3290-3298
    • Xie, Z.1    Nair, U.2    Klionsky, D.J.3
  • 27
  • 29
    • 79960774898 scopus 로고    scopus 로고
    • Autophagosome precursor maturation requires homotypic fusion
    • Moreau, K., Ravikumar, B., Renna, M., Puri, C. and Rubinsztein, D.C. (2011) Autophagosome precursor maturation requires homotypic fusion. Cell 146, 303-317
    • (2011) Cell , vol.146 , pp. 303-317
    • Moreau, K.1    Ravikumar, B.2    Renna, M.3    Puri, C.4    Rubinsztein, D.C.5
  • 30
    • 84858021955 scopus 로고    scopus 로고
    • Curvature of double-membrane organelles generated by changes in membrane size and composition
    • Knorr, R.L., Dimova, R. and Lipowsky, R. (2012) Curvature of double-membrane organelles generated by changes in membrane size and composition. PLoS ONE 7, e32753
    • (2012) PLoS ONE , vol.7
    • Knorr, R.L.1    Dimova, R.2    Lipowsky, R.3
  • 31
    • 84872036691 scopus 로고    scopus 로고
    • Structure of the human ATG12-ATG5 conjugate required for LC3 lipidation in autophagy
    • Otomo, C., Metlagel, Z., Takaesu, G. and Otomo, T. (2012) Structure of the human ATG12-ATG5 conjugate required for LC3 lipidation in autophagy. Nat. Struct. Mol. Biol. 20, 59-66
    • (2012) Nat. Struct. Mol. Biol. , vol.20 , pp. 59-66
    • Otomo, C.1    Metlagel, Z.2    Takaesu, G.3    Otomo, T.4
  • 32
    • 84873405258 scopus 로고    scopus 로고
    • Structure of the Atg12-Atg5 conjugate reveals a platform for stimulating Atg8-PE conjugation
    • Noda, N.N., Fujioka, Y., Hanada, T., Ohsumi, Y. and Inagaki, F. (2012) Structure of the Atg12-Atg5 conjugate reveals a platform for stimulating Atg8-PE conjugation. EMBO Rep. 14, 206-211
    • (2012) EMBO Rep. , vol.14 , pp. 206-211
    • Noda, N.N.1    Fujioka, Y.2    Hanada, T.3    Ohsumi, Y.4    Inagaki, F.5
  • 34
    • 33846514235 scopus 로고    scopus 로고
    • Hierarchy of Atg proteins in preautophagosomal structure organization
    • Suzuki, K., Kubota, Y., Sekito, T. and Ohsumi, Y. (2007) Hierarchy of Atg proteins in preautophagosomal structure organization. Genes Cells 12, 209-218
    • (2007) Genes Cells , vol.12 , pp. 209-218
    • Suzuki, K.1    Kubota, Y.2    Sekito, T.3    Ohsumi, Y.4
  • 35
    • 84869210001 scopus 로고    scopus 로고
    • Mechanism and functions of membrane binding by the Atg5-Atg12/Atg16 complex during autophagosome formation
    • Romanov, J., Walczak, M., Ibiricu, I., Schuchner, S., Ogris, E., Kraft, C. and Martens, S. (2012) Mechanism and functions of membrane binding by the Atg5-Atg12/Atg16 complex during autophagosome formation. EMBO J. 31, 4304-4317
    • (2012) EMBO J. , vol.31 , pp. 4304-4317
    • Romanov, J.1    Walczak, M.2    Ibiricu, I.3    Schuchner, S.4    Ogris, E.5    Kraft, C.6    Martens, S.7
  • 36
    • 77955884684 scopus 로고    scopus 로고
    • Characterization of autophagosome formation site by a hierarchical analysis of mammalian Atg proteins
    • Itakura, E. and Mizushima, N. (2010) Characterization of autophagosome formation site by a hierarchical analysis of mammalian Atg proteins. Autophagy 6, 764-776
    • (2010) Autophagy , vol.6 , pp. 764-776
    • Itakura, E.1    Mizushima, N.2
  • 38
    • 34247186472 scopus 로고    scopus 로고
    • Reactive oxygen species are essential for autophagy and specifically regulate the activity of Atg4
    • Scherz-Shouval, R., Shvets, E., Fass, E., Shorer, H., Gil, L. and Elazar, Z. (2007) Reactive oxygen species are essential for autophagy and specifically regulate the activity of Atg4. EMBO J. 26, 1749-1760
    • (2007) EMBO J. , vol.26 , pp. 1749-1760
    • Scherz-Shouval, R.1    Shvets, E.2    Fass, E.3    Shorer, H.4    Gil, L.5    Elazar, Z.6
  • 41
    • 84857256919 scopus 로고    scopus 로고
    • Atg4 recycles inappropriately lipidated Atg8 to promote autophagosome biogenesis
    • Nakatogawa, H., Ishii, J., Asai, E. and Ohsumi, Y. (2012) Atg4 recycles inappropriately lipidated Atg8 to promote autophagosome biogenesis. Autophagy 8, 177-186
    • (2012) Autophagy , vol.8 , pp. 177-186
    • Nakatogawa, H.1    Ishii, J.2    Asai, E.3    Ohsumi, Y.4
  • 42
    • 79952355107 scopus 로고    scopus 로고
    • Selective autophagy mediated by autophagic adapter proteins
    • Johansen, T. and Lamark, T. (2011) Selective autophagy mediated by autophagic adapter proteins. Autophagy 7, 279-296
    • (2011) Autophagy , vol.7 , pp. 279-296
    • Johansen, T.1    Lamark, T.2
  • 43
    • 79959415069 scopus 로고    scopus 로고
    • Biogenesis and cargo selectivity of autophagosomes
    • Weidberg, H., Shvets, E. and Elazar, Z. (2011) Biogenesis and cargo selectivity of autophagosomes. Annu. Rev. Biochem. 80, 125-156
    • (2011) Annu. Rev. Biochem. , vol.80 , pp. 125-156
    • Weidberg, H.1    Shvets, E.2    Elazar, Z.3
  • 44
    • 77950484269 scopus 로고    scopus 로고
    • Atg8-family interacting motif crucial for selective autophagy
    • Noda, N.N., Ohsumi, Y. and Inagaki, F. (2010) Atg8-family interacting motif crucial for selective autophagy. FEBS Lett. 584, 1379-1385
    • (2010) FEBS Lett. , vol.584 , pp. 1379-1385
    • Noda, N.N.1    Ohsumi, Y.2    Inagaki, F.3
  • 45
    • 77953122645 scopus 로고    scopus 로고
    • LC3 and GATE-16/GABARAP subfamilies are both essential yet act differently in autophagosome biogenesis
    • Weidberg, H., Shvets, E., Shpilka, T., Shimron, F., Shinder, V. and Elazar, Z. (2010) LC3 and GATE-16/GABARAP subfamilies are both essential yet act differently in autophagosome biogenesis. EMBO J. 29, 1792-1802
    • (2010) EMBO J. , vol.29 , pp. 1792-1802
    • Weidberg, H.1    Shvets, E.2    Shpilka, T.3    Shimron, F.4    Shinder, V.5    Elazar, Z.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.