메뉴 건너뛰기




Volumn 13, Issue 1, 2014, Pages

Real-time PCR taqman assay for rapid screening of bloodstream infection

Author keywords

Blood culture; Candida; Gram negative bacteria; Gram positive bacteria; Real time polymerase chain reaction

Indexed keywords

ACINETOBACTER BAUMANNII; AEROMONAS; ANTIBIOTIC SENSITIVITY; ARTICLE; BACTERIUM ISOLATE; BLOOD CULTURE; BLOODSTREAM INFECTION; CANDIDA; CANDIDA ALBICANS; CANDIDA GLABRATA; CANDIDA PARAPSILOSIS; CANDIDA TROPICALIS; CITROBACTER; CITROBACTER FRUENDII; CONTROLLED STUDY; CORYNEBACTERIUM; ENTEROBACTER; ENTEROBACTER ASBURIAE; ENTEROBACTER COLOACAE; ENTEROCOCCUS; ENTEROCOCCUS FAECALIS; ENTEROCOCCUS FAECIUM; ENTEROCOCCUS MUNDTII; ESCHERICHIA COLI; GRAM NEGATIVE BACTERIUM; GRAM POSITIVE BACTERIUM; INTERMETHOD COMPARISON; KLEBSIELLA PNEUMONIAE; LIMIT OF DETECTION; MORAXELLA CATARRHALIS; MORGANELLA MORGANII; NONHUMAN; PROTEUS MIRABILIS; PROVIDENCIA RETTGERI; PSEUDOMONAS AERUGINOSA; REAL TIME POLYMERASE CHAIN REACTION; REAL TIME POLYMERASE CHAIN REACTION TAQMAN ASSAY; SENSITIVITY AND SPECIFICITY; SERRATIA MARCESCENS; STAPHYLOCOCCUS; STAPHYLOCOCCUS AUREUS; STAPHYLOCOCCUS CAPITIS; STAPHYLOCOCCUS EPIDERMIDIS; STAPHYLOCOCCUS HOMINIS; STREPTOCOCCUS;

EID: 84892142728     PISSN: None     EISSN: 14760711     Source Type: Journal    
DOI: 10.1186/1476-0711-13-3     Document Type: Article
Times cited : (9)

References (31)
  • 1
    • 0037451929 scopus 로고    scopus 로고
    • The epidemiology of sepsis in the United States from 1979 through 2000
    • 10.1056/NEJMoa022139, 12700374
    • Martin GS, Mannino DM, Eaton S, Moss M. The epidemiology of sepsis in the United States from 1979 through 2000. N Engl J Med 2003, 348:1546-1554. 10.1056/NEJMoa022139, 12700374.
    • (2003) N Engl J Med , vol.348 , pp. 1546-1554
    • Martin, G.S.1    Mannino, D.M.2    Eaton, S.3    Moss, M.4
  • 3
    • 3943093972 scopus 로고    scopus 로고
    • Nosocomial bloodstream infections in US hospitals: analysis of 24,179 cases from a prospective nationwide surveillance study
    • 10.1086/421946, 15306996
    • Wisplinghoff H, Bischoff T, Tallent SM, Seifert H, Wenzel RP, Edmond MB. Nosocomial bloodstream infections in US hospitals: analysis of 24,179 cases from a prospective nationwide surveillance study. Clin Infect Dis 2004, 39:309-317. 10.1086/421946, 15306996.
    • (2004) Clin Infect Dis , vol.39 , pp. 309-317
    • Wisplinghoff, H.1    Bischoff, T.2    Tallent, S.M.3    Seifert, H.4    Wenzel, R.P.5    Edmond, M.B.6
  • 4
    • 11444249412 scopus 로고    scopus 로고
    • Septic shock
    • 10.1016/S0140-6736(04)17667-8, 15639681
    • Annane D, Bellissant E, Cavaillon JM. Septic shock. Lancet 2005, 365:63-78. 10.1016/S0140-6736(04)17667-8, 15639681.
    • (2005) Lancet , vol.365 , pp. 63-78
    • Annane, D.1    Bellissant, E.2    Cavaillon, J.M.3
  • 5
    • 1242336853 scopus 로고    scopus 로고
    • Prospective study of use of PCR amplification and sequencing of 16S ribosomal DNA from cerebrospinal fluid for diagnosis of bacterial meningitis in a clinical setting
    • 10.1128/JCM.42.2.734-740.2004, 344470, 14766845
    • Schuurman T, de Boer RF, Kooistra-Smid AM, van Zwet AA. Prospective study of use of PCR amplification and sequencing of 16S ribosomal DNA from cerebrospinal fluid for diagnosis of bacterial meningitis in a clinical setting. J Clin Microbiol 2004, 42:734-740. 10.1128/JCM.42.2.734-740.2004, 344470, 14766845.
    • (2004) J Clin Microbiol , vol.42 , pp. 734-740
    • Schuurman, T.1    de Boer, R.F.2    Kooistra-Smid, A.M.3    van Zwet, A.A.4
  • 6
    • 34848832884 scopus 로고    scopus 로고
    • Molecular diagnosis of bloodstream infections caused by non-cultivable bacteria
    • Fenollar F, Raoult D. Molecular diagnosis of bloodstream infections caused by non-cultivable bacteria. Int J Antimicrob Agents 2007, 30:S7-S15.
    • (2007) Int J Antimicrob Agents , vol.30
    • Fenollar, F.1    Raoult, D.2
  • 7
    • 26944478553 scopus 로고    scopus 로고
    • Evaluation of universal probes and primer sets for assessing total bacterial load in clinical samples: general implications and practical use in endodontic antimicrobial therapy
    • 10.1128/JCM.43.10.5332-5337.2005, 1248440, 16208011
    • Horz HP, Vianna ME, Gomes BP, Conrads G. Evaluation of universal probes and primer sets for assessing total bacterial load in clinical samples: general implications and practical use in endodontic antimicrobial therapy. J Clin Microbiol 2005, 43:5332-5337. 10.1128/JCM.43.10.5332-5337.2005, 1248440, 16208011.
    • (2005) J Clin Microbiol , vol.43 , pp. 5332-5337
    • Horz, H.P.1    Vianna, M.E.2    Gomes, B.P.3    Conrads, G.4
  • 8
    • 33746216159 scopus 로고    scopus 로고
    • Identification and characterization of bacterial pathogens causing bloodstream infections by DNA microarray
    • 10.1128/JCM.02291-05, 1489523, 16825354
    • Cleven BE, Palka-Santini M, Gielen J, Meembor S, Kronke M, Krut O. Identification and characterization of bacterial pathogens causing bloodstream infections by DNA microarray. J Clin Microbiol 2006, 44:2389-2397. 10.1128/JCM.02291-05, 1489523, 16825354.
    • (2006) J Clin Microbiol , vol.44 , pp. 2389-2397
    • Cleven, B.E.1    Palka-Santini, M.2    Gielen, J.3    Meembor, S.4    Kronke, M.5    Krut, O.6
  • 9
    • 0033980095 scopus 로고    scopus 로고
    • Rapid identification of bacteria in blood cultures by using fluorescently labeled oligonucleotide probes
    • 86211, 10655390
    • Jansen GJ, Mooibroek M, Idema J, Harmsen HJ, Welling GW, Degener JE. Rapid identification of bacteria in blood cultures by using fluorescently labeled oligonucleotide probes. J Clin Microbiol 2000, 38:814-817. 86211, 10655390.
    • (2000) J Clin Microbiol , vol.38 , pp. 814-817
    • Jansen, G.J.1    Mooibroek, M.2    Idema, J.3    Harmsen, H.J.4    Welling, G.W.5    Degener, J.E.6
  • 10
    • 0034106662 scopus 로고    scopus 로고
    • Development of conventional and real-time PCR assays for the rapid detection of group B streptococci
    • Ke D, Menard C, Picard FJ, Boissinot M, Ouellette M, Roy PH, Bergeron MG. Development of conventional and real-time PCR assays for the rapid detection of group B streptococci. Clin Chem 2000, 46:324-331.
    • (2000) Clin Chem , vol.46 , pp. 324-331
    • Ke, D.1    Menard, C.2    Picard, F.J.3    Boissinot, M.4    Ouellette, M.5    Roy, P.H.6    Bergeron, M.G.7
  • 11
    • 1642326059 scopus 로고    scopus 로고
    • A quantitative LightCycler PCR to detect Streptococcus pneumoniae in blood and CSF
    • 10.1016/S0732-8893(03)00129-9, 14522514
    • van Haeften R, Palladino S, Kay I, Keil T, Heath C, Waterer GW. A quantitative LightCycler PCR to detect Streptococcus pneumoniae in blood and CSF. Diagn Microbiol Infect Dis 2003, 47:407-414. 10.1016/S0732-8893(03)00129-9, 14522514.
    • (2003) Diagn Microbiol Infect Dis , vol.47 , pp. 407-414
    • van Haeften, R.1    Palladino, S.2    Kay, I.3    Keil, T.4    Heath, C.5    Waterer, G.W.6
  • 12
    • 5644227319 scopus 로고    scopus 로고
    • Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases
    • 10.1128/CMR.17.4.840-862.2004, 523561, 15489351
    • Clarridge JE. Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases. Clin Microbiol Rev 2004, 17:840-862. 10.1128/CMR.17.4.840-862.2004, 523561, 15489351.
    • (2004) Clin Microbiol Rev , vol.17 , pp. 840-862
    • Clarridge, J.E.1
  • 13
    • 84859821717 scopus 로고    scopus 로고
    • PCR-based rapid sepsis diagnosis effectively guides clinical treatment in patients with new onset of SIRS
    • 10.1007/s00423-011-0870-z, 22109826
    • Lodes U, Bohmeier B, Lippert H, König B, Meyer F. PCR-based rapid sepsis diagnosis effectively guides clinical treatment in patients with new onset of SIRS. Langenbecks Arch Surg 2012, 397:447-455. 10.1007/s00423-011-0870-z, 22109826.
    • (2012) Langenbecks Arch Surg , vol.397 , pp. 447-455
    • Lodes, U.1    Bohmeier, B.2    Lippert, H.3    König, B.4    Meyer, F.5
  • 14
    • 0037238658 scopus 로고    scopus 로고
    • Employment of broad-range 16S rRNA PCR to detect aetiological agents of infection from clinical specimens in patients with acute meningitis-rapid separation of 16S rRNA PCR amplicons without the need for cloning
    • 10.1046/j.1365-2672.2003.01839.x, 12534811
    • Xu J, Millar BC, Moore JE, Murphy K, Webb H, Fox AJ, Cafferkey M, Crowe MJ. Employment of broad-range 16S rRNA PCR to detect aetiological agents of infection from clinical specimens in patients with acute meningitis-rapid separation of 16S rRNA PCR amplicons without the need for cloning. J Appl Microbiol 2003, 94:197-206. 10.1046/j.1365-2672.2003.01839.x, 12534811.
    • (2003) J Appl Microbiol , vol.94 , pp. 197-206
    • Xu, J.1    Millar, B.C.2    Moore, J.E.3    Murphy, K.4    Webb, H.5    Fox, A.J.6    Cafferkey, M.7    Crowe, M.J.8
  • 15
    • 1242269307 scopus 로고    scopus 로고
    • Detection and differentiation of in vitro-spiked bacteria by real-time PCR and melting-curve analysis
    • 10.1128/JCM.42.2.512-517.2004, 344435, 14766809
    • Klaschik S, Lehmann LE, Raadts A, Book M, Gebel J, Hoeft A, Stuber F. Detection and differentiation of in vitro-spiked bacteria by real-time PCR and melting-curve analysis. J Clin Microbiol 2004, 42:512-517. 10.1128/JCM.42.2.512-517.2004, 344435, 14766809.
    • (2004) J Clin Microbiol , vol.42 , pp. 512-517
    • Klaschik, S.1    Lehmann, L.E.2    Raadts, A.3    Book, M.4    Gebel, J.5    Hoeft, A.6    Stuber, F.7
  • 16
    • 0141958212 scopus 로고    scopus 로고
    • Optimization of real-time PCR assay for rapid and sensitive detection of eubacterial 16S ribosomal DNA in platelet concentrates
    • 10.1128/JCM.41.10.4796-4798.2003, 254335, 14532224
    • Mohammadi T, Reesink HW, Vandenbroucke-Grauls CM, Savelkoul PH. Optimization of real-time PCR assay for rapid and sensitive detection of eubacterial 16S ribosomal DNA in platelet concentrates. J Clin Microbiol 2003, 41:4796-4798. 10.1128/JCM.41.10.4796-4798.2003, 254335, 14532224.
    • (2003) J Clin Microbiol , vol.41 , pp. 4796-4798
    • Mohammadi, T.1    Reesink, H.W.2    Vandenbroucke-Grauls, C.M.3    Savelkoul, P.H.4
  • 18
    • 0037493013 scopus 로고    scopus 로고
    • Effects of rapid detection of bloodstream infections on length of hospitalization and hospital charges
    • 10.1128/JCM.41.7.3119-3125.2003, 165359, 12843051
    • Beekmann SE, Diekema DJ, Chapin KC, Doern GV. Effects of rapid detection of bloodstream infections on length of hospitalization and hospital charges. J Clin Microbiol 2003, 41:3119-3125. 10.1128/JCM.41.7.3119-3125.2003, 165359, 12843051.
    • (2003) J Clin Microbiol , vol.41 , pp. 3119-3125
    • Beekmann, S.E.1    Diekema, D.J.2    Chapin, K.C.3    Doern, G.V.4
  • 20
    • 84856206216 scopus 로고    scopus 로고
    • Comparison of the MALDI Bio-typer system using SeptityperTM specimen processing to routine microbiological methods for identification of bacteria from positive blood culture bottles
    • 10.1128/JCM.05021-11, 3264150, 22162549
    • Buchan BW, Riebe KM, Ledeboer NA. Comparison of the MALDI Bio-typer system using SeptityperTM specimen processing to routine microbiological methods for identification of bacteria from positive blood culture bottles. J Clin Microbiol 2012, 50:346-352. 10.1128/JCM.05021-11, 3264150, 22162549.
    • (2012) J Clin Microbiol , vol.50 , pp. 346-352
    • Buchan, B.W.1    Riebe, K.M.2    Ledeboer, N.A.3
  • 21
    • 84866450171 scopus 로고    scopus 로고
    • Identification of blood culture isolates directly from positive blood cultures by use of matrix-associated laser desorption ionization-time of flight mass spectrometry and a commercial extraction system: analysis of performance, cost, and turnaround time
    • 10.1128/JCM.01479-12, 3457416, 22875888
    • Lagace'-Wiens PR, Adam HJ, Karlowsky JA, Nichol KA, Pang PF, Guenther J, Webb AA, Miller C, Alfa MJ. Identification of blood culture isolates directly from positive blood cultures by use of matrix-associated laser desorption ionization-time of flight mass spectrometry and a commercial extraction system: analysis of performance, cost, and turnaround time. J Clin Microbiol 2012, 50:3324-3328. 10.1128/JCM.01479-12, 3457416, 22875888.
    • (2012) J Clin Microbiol , vol.50 , pp. 3324-3328
    • Lagace'-Wiens, P.R.1    Adam, H.J.2    Karlowsky, J.A.3    Nichol, K.A.4    Pang, P.F.5    Guenther, J.6    Webb, A.A.7    Miller, C.8    Alfa, M.J.9
  • 23
    • 0034021772 scopus 로고    scopus 로고
    • Detection of and discrimination between gram-positive and gram-negative bacteria in intraocular samples by using nested PCR
    • 86579, 10790093
    • Carroll NM, Jaeger EE, Choudhury S, Dunlop AA, Matheson MM, Adamson P, Okhravi N, Lightman S. Detection of and discrimination between gram-positive and gram-negative bacteria in intraocular samples by using nested PCR. J Clin Microbiol 2000, 38:1753-1757. 86579, 10790093.
    • (2000) J Clin Microbiol , vol.38 , pp. 1753-1757
    • Carroll, N.M.1    Jaeger, E.E.2    Choudhury, S.3    Dunlop, A.A.4    Matheson, M.M.5    Adamson, P.6    Okhravi, N.7    Lightman, S.8
  • 24
    • 0034525815 scopus 로고    scopus 로고
    • Use of polymerase chain reaction (PCR) and DNA probe hybridization to determine the Gram reaction of the infecting bacterium in the intraocular fluids of patients with endophthalmitis
    • 10.1053/jinf.2000.0731, 11120608
    • Anand AR, Madhavan HN, Therese KL. Use of polymerase chain reaction (PCR) and DNA probe hybridization to determine the Gram reaction of the infecting bacterium in the intraocular fluids of patients with endophthalmitis. J Infect 2000, 41:221-226. 10.1053/jinf.2000.0731, 11120608.
    • (2000) J Infect , vol.41 , pp. 221-226
    • Anand, A.R.1    Madhavan, H.N.2    Therese, K.L.3
  • 25
    • 0028044921 scopus 로고
    • PCR primers and probes for the 16S rRNA gene of most species of pathogenic bacteria, including bacteria found in cerebrospinal fluid
    • 263034, 7512093
    • Greisen K, Loeffelholz M, Purohit A, Leong D. PCR primers and probes for the 16S rRNA gene of most species of pathogenic bacteria, including bacteria found in cerebrospinal fluid. J Clin Microbiol 1994, 32:335-351. 263034, 7512093.
    • (1994) J Clin Microbiol , vol.32 , pp. 335-351
    • Greisen, K.1    Loeffelholz, M.2    Purohit, A.3    Leong, D.4
  • 26
    • 0035107089 scopus 로고    scopus 로고
    • Detection of bacterial DNA by PCR and reverse hybridization in the 16S rRNA gene with particular reference to neonatal septicemia
    • 10.1111/j.1651-2227.2001.tb00281.x, 11236048
    • Shang S, Chen Z, Yu X. Detection of bacterial DNA by PCR and reverse hybridization in the 16S rRNA gene with particular reference to neonatal septicemia. Acta Paediatr 2001, 90:179-183. 10.1111/j.1651-2227.2001.tb00281.x, 11236048.
    • (2001) Acta Paediatr , vol.90 , pp. 179-183
    • Shang, S.1    Chen, Z.2    Yu, X.3
  • 27
    • 0036840156 scopus 로고    scopus 로고
    • Real-time PCR for detection and differentiation of gram-positive and gram-negative bacteria
    • 10.1128/JCM.40.11.4304-4307.2002, 139680, 12409416
    • Klaschik S, Lehmann LE, Raadts A, Book M, Hoeft A, Stuber F. Real-time PCR for detection and differentiation of gram-positive and gram-negative bacteria. J Clin Microbiol 2002, 40:4304-4307. 10.1128/JCM.40.11.4304-4307.2002, 139680, 12409416.
    • (2002) J Clin Microbiol , vol.40 , pp. 4304-4307
    • Klaschik, S.1    Lehmann, L.E.2    Raadts, A.3    Book, M.4    Hoeft, A.5    Stuber, F.6
  • 28
    • 33747186194 scopus 로고    scopus 로고
    • Real-time quantitative broad-range PCR assay for detection of the 16S rRNA gene followed by sequencing for species identification
    • 10.1128/JCM.00112-06, 1594602, 16891488
    • Zucol F, Ammann RA, Berger C, Aebi C, Altwegg M, Niggli FK, Nadal D. Real-time quantitative broad-range PCR assay for detection of the 16S rRNA gene followed by sequencing for species identification. J Clin Microbiol 2006, 44:2750-2759. 10.1128/JCM.00112-06, 1594602, 16891488.
    • (2006) J Clin Microbiol , vol.44 , pp. 2750-2759
    • Zucol, F.1    Ammann, R.A.2    Berger, C.3    Aebi, C.4    Altwegg, M.5    Niggli, F.K.6    Nadal, D.7
  • 29
    • 1542513865 scopus 로고    scopus 로고
    • Molecular epidemiology of coagulase-negative staphylococci causing sepsis in a neonatal intensive care unit over an 11-year period
    • 10.1128/JCM.42.3.992-995.2004, 356815, 15004043
    • Krediet TG, Mascini EM, van Rooij E, Vlooswijk J, Paauw A, Gerards LJ, Fleer A. Molecular epidemiology of coagulase-negative staphylococci causing sepsis in a neonatal intensive care unit over an 11-year period. J Clin Microbiol 2004, 42:992-995. 10.1128/JCM.42.3.992-995.2004, 356815, 15004043.
    • (2004) J Clin Microbiol , vol.42 , pp. 992-995
    • Krediet, T.G.1    Mascini, E.M.2    van Rooij, E.3    Vlooswijk, J.4    Paauw, A.5    Gerards, L.J.6    Fleer, A.7
  • 30
    • 67650747674 scopus 로고    scopus 로고
    • Rapid diagnosis of candidaemia by real-time PCR detection of Candida DNA in blood samples
    • 10.1099/jmm.0.007906-0, 19528159
    • Wellinghausen N, Siegel D, Winter J, Gebert S. Rapid diagnosis of candidaemia by real-time PCR detection of Candida DNA in blood samples. J Med Microbiol 2009, 58:1106-1111. 10.1099/jmm.0.007906-0, 19528159.
    • (2009) J Med Microbiol , vol.58 , pp. 1106-1111
    • Wellinghausen, N.1    Siegel, D.2    Winter, J.3    Gebert, S.4
  • 31
    • 3242763823 scopus 로고    scopus 로고
    • Clinical microbiology of bacterial and fungal sepsis in very-low-birth-weight infants
    • 10.1128/CMR.17.3.638-680.2004, 452555, 15258097
    • Kaufman D, Fairchild KD. Clinical microbiology of bacterial and fungal sepsis in very-low-birth-weight infants. Clin Microbiol Rev 2004, 17:638-680. 10.1128/CMR.17.3.638-680.2004, 452555, 15258097.
    • (2004) Clin Microbiol Rev , vol.17 , pp. 638-680
    • Kaufman, D.1    Fairchild, K.D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.