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Volumn 111, Issue 1, 2014, Pages 208-213

Morphological optimization for access to dual oxidants in biofilms

Author keywords

[No Author keywords available]

Indexed keywords

OXIDIZING AGENT; OXYGEN; PHENAZINE DERIVATIVE;

EID: 84891922611     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1315521110     Document Type: Article
Times cited : (70)

References (49)
  • 1
    • 0036167851 scopus 로고    scopus 로고
    • Effects of reduced mucus oxygen concentration in airway Pseudomonas infections of cystic fibrosis patients
    • Worlitzsch D, et al. (2002) Effects of reduced mucus oxygen concentration in airway Pseudomonas infections of cystic fibrosis patients. J Clin Invest 109(3): 317-325.
    • (2002) J Clin Invest , vol.109 , Issue.3 , pp. 317-325
    • Worlitzsch, D.1
  • 2
    • 0029476831 scopus 로고
    • Physiological ecology of cyanobacteria in microbial mats and other communities
    • Stal L (1995) Physiological ecology of cyanobacteria in microbial mats and other communities. New Phytol 131(1): 1-32.
    • (1995) New Phytol , vol.131 , Issue.1 , pp. 1-32
    • Stal, L.1
  • 3
    • 0032801424 scopus 로고    scopus 로고
    • Genetic analysis of natural populations of the marine diazotrophic cyanobacterium Trichodesmium
    • Janson S, Bergman B, Carpenter E, Giovannoni S, Vergin K (1999) Genetic analysis of natural populations of the marine diazotrophic cyanobacterium Trichodesmium. FEMS Microbiol Ecol 30(1): 57-65.
    • (1999) FEMS Microbiol Ecol , vol.30 , Issue.1 , pp. 57-65
    • Janson, S.1    Bergman, B.2    Carpenter, E.3    Giovannoni, S.4    Vergin, K.5
  • 4
    • 33846485152 scopus 로고    scopus 로고
    • Cooperation and conflict in microbial biofilms
    • Xavier JB, Foster KR (2007) Cooperation and conflict in microbial biofilms. Proc Natl Acad Sci USA 104(3): 876-881.
    • (2007) Proc Natl Acad Sci USA , vol.104 , Issue.3 , pp. 876-881
    • Xavier, J.B.1    Foster, K.R.2
  • 5
    • 0032485575 scopus 로고    scopus 로고
    • Mathematical modeling of biofilm structure with a hybrid differential-discrete cellular automaton approach
    • Picioreanu C, van Loosdrecht MC, Heijnen JJ (1998) Mathematical modeling of biofilm structure with a hybrid differential-discrete cellular automaton approach. Biotechnol Bioeng 58(1): 101-116.
    • (1998) Biotechnol Bioeng , vol.58 , Issue.1 , pp. 101-116
    • Picioreanu, C.1    Van Loosdrecht, M.C.2    Heijnen, J.J.3
  • 7
    • 22744458324 scopus 로고    scopus 로고
    • A framework for multidimensional modelling of activity and structure ofmultispecies biofilms
    • Xavier JB, Picioreanu C, van Loosdrecht MC (2005) A framework for multidimensional modelling of activity and structure ofmultispecies biofilms. EnvironMicrobiol 7(8): 1085-1103.
    • (2005) EnvironMicrobiol , vol.7 , Issue.8 , pp. 1085-1103
    • Xavier, J.B.1    Picioreanu, C.2    Van Loosdrecht, M.C.3
  • 9
    • 0038375994 scopus 로고    scopus 로고
    • Biofilm formation by Pseudomonas aeruginosa wild type, flagella and type IV pili mutants
    • Klausen M, et al. (2003) Biofilm formation by Pseudomonas aeruginosa wild type, flagella and type IV pili mutants. Mol Microbiol 48(6): 1511-1524.
    • (2003) Mol Microbiol , vol.48 , Issue.6 , pp. 1511-1524
    • Klausen, M.1
  • 10
    • 0028439536 scopus 로고
    • Effects of biofilm structures on oxygen distribution and mass transport
    • de Beer D, Stoodley P, Roe F, Lewandowski Z (1994) Effects of biofilm structures on oxygen distribution and mass transport. Biotechnol Bioeng 43(11): 1131-1138.
    • (1994) Biotechnol Bioeng , vol.43 , Issue.11 , pp. 1131-1138
    • De Beer, D.1    Stoodley, P.2    Roe, F.3    Lewandowski, Z.4
  • 11
    • 33644933286 scopus 로고    scopus 로고
    • Chelator-induced dispersal and killing of Pseudomonas aeruginosa cells in a biofilm
    • Banin E, Brady KM, Greenberg EP (2006) Chelator-induced dispersal and killing of Pseudomonas aeruginosa cells in a biofilm. Appl Environ Microbiol 72(3): 2064-2069.
    • (2006) Appl Environ Microbiol , vol.72 , Issue.3 , pp. 2064-2069
    • Banin, E.1    Brady, K.M.2    Greenberg, E.P.3
  • 12
    • 77950831062 scopus 로고    scopus 로고
    • Emergence of spatial structure in cell groups and the evolution of cooperation
    • Nadell CD, Foster KR, Xavier JB (2010) Emergence of spatial structure in cell groups and the evolution of cooperation. PLOS Comput Biol 6(3):e1000716.
    • (2010) PLOS Comput Biol , vol.6 , Issue.3
    • Nadell, C.D.1    Foster, K.R.2    Xavier, J.B.3
  • 13
    • 84856018572 scopus 로고    scopus 로고
    • Growth, metabolic partitioning, and the size of microorganisms
    • Kempes CP, Dutkiewicz S, Follows MJ (2012) Growth, metabolic partitioning, and the size of microorganisms. Proc Natl Acad Sci USA 109(2): 495-500.
    • (2012) Proc Natl Acad Sci USA , vol.109 , Issue.2 , pp. 495-500
    • Kempes, C.P.1    Dutkiewicz, S.2    Follows, M.J.3
  • 14
    • 84988044805 scopus 로고    scopus 로고
    • The energetics of genome complexity
    • Lane N, MartinW(2010) The energetics of genome complexity. Nature 467(7318): 929-934.
    • (2010) Nature , vol.467 , Issue.7318 , pp. 929-934
    • Lane, N.1    Martin, W.2
  • 15
    • 0037133302 scopus 로고    scopus 로고
    • Allometric scaling of metabolic rate from molecules and mitochondria to cells andmammals
    • West GB, Woodruff WH, Brown JH (2002) Allometric scaling of metabolic rate from molecules and mitochondria to cells andmammals. Proc Natl Acad SciUSA 99(Suppl 1): 2473-2478.
    • (2002) Proc Natl Acad SciUSA , vol.99 , Issue.SUPPL. 1 , pp. 2473-2478
    • West, G.B.1    Woodruff, W.H.2    Brown, J.H.3
  • 17
    • 77957658611 scopus 로고    scopus 로고
    • A general basis for quarter-power scaling in animals
    • Banavar JR, et al. (2010) A general basis for quarter-power scaling in animals. Proc Natl Acad Sci USA 107(36): 15816-15820.
    • (2010) Proc Natl Acad Sci USA , vol.107 , Issue.36 , pp. 15816-15820
    • Banavar, J.R.1
  • 18
    • 78751700062 scopus 로고    scopus 로고
    • Venation networks and the origin of the leaf economics spectrum
    • Blonder B, Violle C, Bentley LP, Enquist BJ (2011) Venation networks and the origin of the leaf economics spectrum. Ecol Lett 14(2): 91-100.
    • (2011) Ecol Lett , vol.14 , Issue.2 , pp. 91-100
    • Blonder, B.1    Violle, C.2    Bentley, L.P.3    Enquist, B.J.4
  • 19
    • 41149115123 scopus 로고    scopus 로고
    • The role of oxygen availability in embryonic development and stem cell function
    • Simon MC, Keith B (2008) The role of oxygen availability in embryonic development and stem cell function. Nat Rev Mol Cell Biol 9(4): 285-296.
    • (2008) Nat Rev Mol Cell Biol , vol.9 , Issue.4 , pp. 285-296
    • Simon, M.C.1    Keith, B.2
  • 20
    • 57149142495 scopus 로고    scopus 로고
    • The impact of O2 availability on human cancer
    • Bertout JA, Patel SA, Simon MC (2008) The impact of O2 availability on human cancer. Nat Rev Cancer 8(12): 967-975.
    • (2008) Nat Rev Cancer , vol.8 , Issue.12 , pp. 967-975
    • Bertout, J.A.1    Patel, S.A.2    Simon, M.C.3
  • 21
    • 0036359548 scopus 로고    scopus 로고
    • Hypoxia - A key regulatory factor in tumour growth
    • Harris AL (2002) Hypoxia-a key regulatory factor in tumour growth. Nat Rev Cancer 2(1): 38-47.
    • (2002) Nat Rev Cancer , vol.2 , Issue.1 , pp. 38-47
    • Harris, A.L.1
  • 22
    • 14644442283 scopus 로고    scopus 로고
    • Oxygen, oxidative stress, hypoxia, and heart failure
    • Giordano FJ (2005) Oxygen, oxidative stress, hypoxia, and heart failure. J Clin Invest 115(3): 500-508.
    • (2005) J Clin Invest , vol.115 , Issue.3 , pp. 500-508
    • Giordano, F.J.1
  • 23
    • 0037301134 scopus 로고    scopus 로고
    • Lung development - The effects of chronic hypoxia
    • Haworth SG, Hislop AA (2003) Lung development-the effects of chronic hypoxia. Semin Neonatol 8(1): 1-8.
    • (2003) Semin Neonatol , vol.8 , Issue.1 , pp. 1-8
    • Haworth, S.G.1    Hislop, A.A.2
  • 24
    • 40949111782 scopus 로고    scopus 로고
    • Hypoxia-inducible factor: Roles in development, physiology, and disease
    • Chandel NS, Simon MC (2008) Hypoxia-inducible factor: roles in development, physiology, and disease. Cell Death Differ 15(4): 619-620.
    • (2008) Cell Death Differ , vol.15 , Issue.4 , pp. 619-620
    • Chandel, N.S.1    Simon, M.C.2
  • 25
    • 77954236943 scopus 로고    scopus 로고
    • Large colonial organisms with coordinated growth in oxygenated environments 2.1 Gyr ago
    • El Albani A, et al. (2010) Large colonial organisms with coordinated growth in oxygenated environments 2.1 Gyr ago. Nature 466(7302): 100-104.
    • (2010) Nature , vol.466 , Issue.7302 , pp. 100-104
    • El Albani, A.1
  • 26
    • 0034443286 scopus 로고    scopus 로고
    • Microbial biofilms: From ecology to molecular genetics
    • Davey ME, O'Toole GA (2000) Microbial biofilms: From ecology to molecular genetics. Microbiol Mol Biol Rev 64(4): 847-867.
    • (2000) Microbiol Mol Biol Rev , vol.64 , Issue.4 , pp. 847-867
    • Davey, M.E.1    O'Toole, G.A.2
  • 27
    • 1242297814 scopus 로고    scopus 로고
    • Genes involved in matrix formation in Pseudomonas aeruginosa PA14 biofilms
    • Friedman L, Kolter R (2004) Genes involved in matrix formation in Pseudomonas aeruginosa PA14 biofilms. Mol Microbiol 51(3): 675-690.
    • (2004) Mol Microbiol , vol.51 , Issue.3 , pp. 675-690
    • Friedman, L.1    Kolter, R.2
  • 28
    • 84874117430 scopus 로고    scopus 로고
    • Bacterial community morphogenesis is intimately linked to the intracellular redox state
    • Dietrich LE, et al. (2013) Bacterial community morphogenesis is intimately linked to the intracellular redox state. J Bacteriol 195(7): 1371-1380.
    • (2013) J Bacteriol , vol.195 , Issue.7 , pp. 1371-1380
    • Dietrich, L.E.1
  • 29
    • 84869234725 scopus 로고    scopus 로고
    • Localized cell death focuses mechanical forces during 3D patterning in a biofilm
    • Asally M, et al. (2012) Localized cell death focuses mechanical forces during 3D patterning in a biofilm. Proc Natl Acad Sci USA 109(46): 18891-18896.
    • (2012) Proc Natl Acad Sci USA , vol.109 , Issue.46 , pp. 18891-18896
    • Asally, M.1
  • 30
    • 84856392912 scopus 로고    scopus 로고
    • Osmotic spreading of Bacillus subtilis biofilms driven by an extracellular matrix
    • Seminara A, et al. (2012) Osmotic spreading of Bacillus subtilis biofilms driven by an extracellular matrix. Proc Natl Acad Sci USA 109(4): 1116-1121.
    • (2012) Proc Natl Acad Sci USA , vol.109 , Issue.4 , pp. 1116-1121
    • Seminara, A.1
  • 31
    • 50649098819 scopus 로고    scopus 로고
    • Redox-active antibiotics control gene expression and community behavior in divergent bacteria
    • Dietrich LE, Teal TK, Price-Whelan A, Newman DK (2008) Redox-active antibiotics control gene expression and community behavior in divergent bacteria. Science 321(5893): 1203-1206.
    • (2008) Science , vol.321 , Issue.5893 , pp. 1203-1206
    • Dietrich, L.E.1    Teal, T.K.2    Price-Whelan, A.3    Newman, D.K.4
  • 32
    • 73849089506 scopus 로고    scopus 로고
    • Endogenous phenazine antibiotics promote anaerobic survival of Pseudomonas aeruginosa via extracellular electron transfer
    • Wang Y, Kern SE, Newman DK (2010) Endogenous phenazine antibiotics promote anaerobic survival of Pseudomonas aeruginosa via extracellular electron transfer. J Bacteriol 192(1): 365-369.
    • (2010) J Bacteriol , vol.192 , Issue.1 , pp. 365-369
    • Wang, Y.1    Kern, S.E.2    Newman, D.K.3
  • 33
    • 34548475303 scopus 로고    scopus 로고
    • Pyocyanin alters redox homeostasis and carbon flux through central metabolic pathways in Pseudomonas aeruginosa PA14
    • Price-Whelan A, Dietrich LE, Newman DK (2007) Pyocyanin alters redox homeostasis and carbon flux through central metabolic pathways in Pseudomonas aeruginosa PA14. J Bacteriol 189(17): 6372-6381.
    • (2007) J Bacteriol , vol.189 , Issue.17 , pp. 6372-6381
    • Price-Whelan, A.1    Dietrich, L.E.2    Newman, D.K.3
  • 34
    • 84876931237 scopus 로고    scopus 로고
    • Respiration control of multicellularity in Bacillus subtilis by a complex of the cytochrome chain with a membrane-embedded histidine kinase
    • Kolodkin-Gal I, et al. (2013) Respiration control of multicellularity in Bacillus subtilis by a complex of the cytochrome chain with a membrane-embedded histidine kinase. Genes Dev 27(8): 887-899.
    • (2013) Genes Dev , vol.27 , Issue.8 , pp. 887-899
    • Kolodkin-Gal, I.1
  • 36
    • 77957347061 scopus 로고    scopus 로고
    • Reaction-diffusion model as a framework for understanding biological pattern formation
    • Kondo S, Miura T (2010) Reaction-diffusion model as a framework for understanding biological pattern formation. Science 329(5999): 1616-1620.
    • (2010) Science , vol.329 , Issue.5999 , pp. 1616-1620
    • Kondo, S.1    Miura, T.2
  • 38
    • 0033722824 scopus 로고    scopus 로고
    • Reaction-diffusion modelling of bacterial colony patterns
    • Mimura M, Sakaguchi H, Matsushita M (2000) Reaction-diffusion modelling of bacterial colony patterns. Physica A 282(1): 283-303.
    • (2000) Physica A , vol.282 , Issue.1 , pp. 283-303
    • Mimura, M.1    Sakaguchi, H.2    Matsushita, M.3
  • 39
    • 0037372799 scopus 로고    scopus 로고
    • Diffusion in biofilms
    • Stewart PS (2003) Diffusion in biofilms. J Bacteriol 185(5): 1485-1491.
    • (2003) J Bacteriol , vol.185 , Issue.5 , pp. 1485-1491
    • Stewart, P.S.1
  • 40
    • 77954339797 scopus 로고    scopus 로고
    • Mathematical description of microbial biofilms
    • Klapper I, Dockery J (2010) Mathematical description of microbial biofilms. SIAM Rev 52(2): 221-265.
    • (2010) SIAM Rev , vol.52 , Issue.2 , pp. 221-265
    • Klapper, I.1    Dockery, J.2
  • 41
    • 80052662010 scopus 로고    scopus 로고
    • Reaction-diffusion model of nutrient uptake in a biofilm: Theory and experiment
    • Petroff AP, et al. (2011) Reaction-diffusion model of nutrient uptake in a biofilm: Theory and experiment. J Theor Biol 289: 90-95.
    • (2011) J Theor Biol , vol.289 , pp. 90-95
    • Petroff, A.P.1
  • 42
    • 0032207792 scopus 로고    scopus 로고
    • Studies of bacterial branching growth using reaction-diffusion models for colonial development
    • Golding I, Kozlovsky Y, Cohen I, Ben-Jacob E (1998) Studies of bacterial branching growth using reaction-diffusion models for colonial development. Physica A 260(3): 510-554.
    • (1998) Physica A , vol.260 , Issue.3 , pp. 510-554
    • Golding, I.1    Kozlovsky, Y.2    Cohen, I.3    Ben-Jacob, E.4
  • 43
    • 0022092542 scopus 로고
    • Mathematical simulation of a biofilm process
    • Benefield L, Molz F (1985) Mathematical simulation of a biofilm process. Biotechnol Bioeng 27(7): 921-931.
    • (1985) Biotechnol Bioeng , vol.27 , Issue.7 , pp. 921-931
    • Benefield, L.1    Molz, F.2
  • 44
    • 43049089438 scopus 로고
    • The maintenance energy of bacteria in growing cultures
    • Pirt SJ (1965) The maintenance energy of bacteria in growing cultures. Proc R Soc Lond B Biol Sci 163(991): 224-231.
    • (1965) Proc R Soc Lond B Biol Sci , vol.163 , Issue.991 , pp. 224-231
    • Pirt, S.J.1
  • 45
    • 0019420171 scopus 로고
    • A macroscopic model describing yield and maintenance relationships in aerobic fermentation processes
    • Heijnen J, Roels J (1981) A macroscopic model describing yield and maintenance relationships in aerobic fermentation processes. Biotechnol Bioeng 23(4): 739-763.
    • (1981) Biotechnol Bioeng , vol.23 , Issue.4 , pp. 739-763
    • Heijnen, J.1    Roels, J.2
  • 46
    • 0001639179 scopus 로고
    • The growth of bacterial cultures
    • Monod J (1949) The growth of bacterial cultures. Annu Rev Microbiol 3(1): 371-394.
    • (1949) Annu Rev Microbiol , vol.3 , Issue.1 , pp. 371-394
    • Monod, J.1
  • 47
    • 77953399359 scopus 로고    scopus 로고
    • Biophysical basis for the geometry of conical stromatolites
    • Petroff AP, et al. (2010) Biophysical basis for the geometry of conical stromatolites. Proc Natl Acad Sci USA 107(22): 9956-9961.
    • (2010) Proc Natl Acad Sci USA , vol.107 , Issue.22 , pp. 9956-9961
    • Petroff, A.P.1
  • 48
    • 84872529557 scopus 로고    scopus 로고
    • Liquid transport facilitated by channels in Bacillus subtilis biofilms
    • Wilking JN, et al. (2013) Liquid transport facilitated by channels in Bacillus subtilis biofilms. Proc Natl Acad Sci USA 110(3): 848-852.
    • (2013) Proc Natl Acad Sci USA , vol.110 , Issue.3 , pp. 848-852
    • Wilking, J.N.1
  • 49
    • 33747082622 scopus 로고    scopus 로고
    • The phenazine pyocyanin is a terminal signalling factor in the quorum sensing network of Pseudomonas aeruginosa
    • Dietrich LE, Price-Whelan A, Petersen A, WhiteleyM, Newman DK (2006) The phenazine pyocyanin is a terminal signalling factor in the quorum sensing network of Pseudomonas aeruginosa. Mol Microbiol 61(5): 1308-1321.
    • (2006) Mol Microbiol , vol.61 , Issue.5 , pp. 1308-1321
    • Dietrich, L.E.1    Price-Whelan, A.2    Petersen, A.3    Whiteley, M.4    Newman, D.K.5


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