Molecular recognition in myxobacterial outer membrane exchange: Functional, social and evolutionary implications

Molecular Microbiology

Volumn 91, Issue 2, 2014, Pages 209-220

  Wall, Daniel ^a  

^a UNIVERSITY OF WYOMING   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CELL SURFACE RECEPTOR; PROTEIN TRAA; UNCLASSIFIED DRUG;

BACTERIAL OUTER MEMBRANE; CELL COMMUNICATION; CELL CONTACT; CELL MOTILITY; EVOLUTION; GENETIC VARIABILITY; HOMEOSTASIS; INTRACELLULAR SIGNALING; MEMBRANE FUSION; MEMBRANE STRUCTURE; MEMBRANE TRANSPORT; MITOCHONDRION; MOLECULAR RECOGNITION; MYXOCOCCALES; NONHUMAN; OUTER MEMBRANE EXCHANGE; PRIORITY JOURNAL; PROTEIN FUNCTION; PROTEIN TRANSPORT; REVIEW; SOCIAL INTERACTION; TRANSPORT KINETICS;

MYXOCOCCALES;

BACTERIAL OUTER MEMBRANE PROTEINS; BACTERIAL PROTEINS; BIOLOGICAL EVOLUTION; LIPIDS; MICROBIAL INTERACTIONS; MYXOCOCCALES; PROTEIN TRANSPORT;

EID: 84891908546     PISSN: 0950382X     EISSN: 13652958     Source Type: Journal    
DOI: 10.1111/mmi.12450     Document Type: Review

References (86)

1. Aguilar, P.S., Baylies, M.K., Fleissner, A., Helming, L., Inoue, N., Podbilewicz, B., etal. (2013) Genetic basis of cell-cell fusion mechanisms. Trends Genet 29: 427-437.
2. Aoki, S.K., Diner, E.J., de Roodenbeke, C.T., Burgess, B.R., Poole, S.J., Braaten, B.A., etal. (2010) A widespread family of polymorphic contact-dependent toxin delivery systems in bacteria. Nature 468: 439-442.
3. Axelrod, R., and Hamilton, W.D. (1981) The evolution of cooperation. Science 211: 1390-1396.
4. Berleman, J.E., and Kirby, J.R. (2009) Deciphering the hunting strategy of a bacterial wolfpack. FEMS Microbiol Rev 33: 942-957.
5. Bhat, S., Zhu, X., Patel, R.P., Orlando, R., and Shimkets, L.J. (2011) Identification and localization of Myxococcus xanthus porins and lipoproteins. PLoS ONE 6: e27475.
6. Cagalinec, M., Safiulina, D., Liiv, M., Liiv, J., Choubey, V., Wareski, P., etal. (2013) Principles of the mitochondrial fusion and fission cycle in neurons. J Cell Sci 126: 2187-2197.
7. Chan, D.C. (2012) Fusion and fission: interlinked processes critical for mitochondrial health. Annu Rev Genet 46: 265-287.
8. Chen, G., Wang, J., Xu, X., Wu, X., Piao, R., and Siu, C.H. (2013) TgrC1 mediates cell-cell adhesion by interacting with TgrB1 via mutual IPT/TIG domains during development of Dictyostelium discoideum. Biochem J 452: 259-269.
9. Cote, J.P., and Mourez, M. (2011) Structure-function analysis of the TibA self-associating autotransporter reveals a modular organization. Infect Immun 79: 1826-1832.
10. Dana, J.R., and Shimkets, L.J. (1993) Regulation of cohesion-dependent cell interactions in Myxococcus xanthus. J Bacteriol 175: 3636-3647.
11. Davis, D.M. (2007) Intercellular transfer of cell-surface proteins is common and can affect many stages of an immune response. Nat Rev Immunol 7: 238-243.
12. Dawid, W. (2000) Biology and global distribution of myxobacteria in soils. FEMS Microbiol Rev 24: 403-427.
13. Dawkins, R. (1976) The Selfish Gene. Oxford, UK: Oxford University Press.
14. Dawkins, R. (1982) The Extended Phenotype: The Gene as the Unit of Selection. Oxford and San Francisco: W. H. Freeman and Company.
15. Dubey, G.P., and Ben-Yehuda, S. (2011) Intercellular nanotubes mediate bacterial communication. Cell 144: 590-600.
16. Ducret, A., Fleuchot, B., Bergam, P., and Mignot, T. (2013) Direct live imaging of cell-cell protein transfer by transient outer membrane fusion in Myxococcus xanthus. eLife 2: e00868.
17. Dworkin, M. (1996) Recent advances in the social and developmental biology of the myxobacteria. Microbiol Rev 60: 70-102.
18. Garcia, E.C., Anderson, M.S., Hagar, J.A., and Cotter, P.A. (2013) Burkholderia BcpA mediates biofilm formation independently of interbacterial contact-dependent growth inhibition. Mol Microbiol 89: 1213-1225.
19. Gardner, A., and West, S.A. (2010) Greenbeards. Evolution 64: 25-38.
20. Gibbs, K.A., Urbanowski, M.L., and Greenberg, E.P. (2008) Genetic determinants of self identity and social recognition in bacteria. Science 321: 256-259.
21. Gilbert, O.M., Queller, D.C., and Strassmann, J.E. (2009) Discovery of a large clonal patch of a social amoeba: implications for social evolution. Mol Ecol 18: 1273-1281.
22. Gill, R.E., Cull, M.G., and Fly, S. (1988) Genetic identification and cloning of a gene required for developmental cell interactions in Myxococcus xanthus. J Bacteriol 170: 5279-5288.
23. Goossens, K., and Willaert, R. (2010) Flocculation protein structure and cell-cell adhesion mechanism in Saccharomyces cerevisiae. Biotechnol Lett 32: 1571-1585.
24. Haig, D. (1996) Gestational drive and the green-bearded placenta. Proc Natl Acad Sci USA 93: 6547-6551.
25. Haig, D. (1997) The social gene. In Behavioural Ecology: An Evolutionary Approach. Krebs, J.R., and Davies, N.B. (eds). Cambridge, UK: Wiley-Blackwell, pp. 284-304.
26. Haig, D. (2012) The strategic gene. Biol Philos 27: 461-479.
27. Hamilton, W.D. (1964a) The genetical evolution of social behaviour. I. J Theor Biol 7: 1-16.
28. Hamilton, W.D. (1964b) The genetical evolution of social behaviour. II. J Theor Biol 7: 17-52.
29. Hayes, C.S., Aoki, S.K., and Low, D.A. (2010) Bacterial contact-dependent delivery systems. Annu Rev Genet 44: 71-90.
30. Hirose, S., Benabentos, R., Ho, H.I., Kuspa, A., and Shaulsky, G. (2011) Self-recognition in social amoebae is mediated by allelic pairs of tiger genes. Science 333: 467-470.
31. Hirsch, H.J. (1977) Bacteriocins from Myxococcus fulvus (Myxobacterales). Arch Microbiol 115: 45-49.
32. Ho, H.I., Hirose, S., Kuspa, A., and Shaulsky, G. (2013) Kin recognition protects cooperators against cheaters. Curr Biol 23: 1590-1595.
33. Hodgkin, J., and Kaiser, D. (1977) Cell-to-cell stimulation of movement in nonmotile mutants of Myxococcus. Proc Natl Acad Sci USA 74: 2938-2942.
34. Hodgkin, J., and Kaiser, J. (1979) Genetics of gliding motility in Myxococcus xanthus (Myxobacterales): two gene systems control movement. Mol Gen Genet 171: 177-191.
35. Jacobi, C.A., Reichenbach, H., Tindall, B.J., and Stackebrandt, E. (1996) 'Candidatus comitans', a bacterium living in coculture with Chondromyces crocatus (myxobacteria). Int J Syst Bacteriol 46: 119-122.
36. Jahn, R., Lang, T., and Sudhof, T.C. (2003) Membrane fusion. Cell 112: 519-533.
37. Kaiser, D. (1979) Social gliding is correlated with the presence of pili in Myxococcus xanthus. Proc Natl Acad Sci USA 76: 5952-5956.
38. Kaiser, D. (2004) Signaling in myxobacteria. Annu Rev Microbiol 58: 75-98.
39. Kolenbrander, P.E., Andersen, R.N., Blehert, D.S., Egland, P.G., Foster, J.S., and Palmer, R.J., Jr (2002) Communication among oral bacteria. Microbiol Mol Biol Rev 66: 486-505.
40. Konovalova, A., and Sogaard-Andersen, L. (2011) Close encounters: contact-dependent interactions in bacteria. Mol Microbiol 81: 297-301.
41. Kozlov, M.M., McMahon, H.T., and Chernomordik, L.V. (2010) Protein-driven membrane stresses in fusion and fission. Trends Biochem Sci 35: 699-706.
42. Kraemer, S.A., and Velicer, G.J. (2011) Endemic social diversity within natural kin groups of a cooperative bacterium. Proc Natl Acad Sci USA 108 (Suppl. 2): 10823-10830.
43. Lipke, P.N., Garcia, M.C., Alsteens, D., Ramsook, C.B., Klotz, S.A., and Dufrene, Y.F. (2012) Strengthening relationships: amyloids create adhesion nanodomains in yeasts. Trends Microbiol 20: 59-65.
44. McCurdy, H.D. (1969) Studies on the taxonomy of the Myxobacterales. I. Record of Canadian isolates and survey of methods. Can J Microbiol 15: 1453-1461.
45. McNew, J.A., Sondermann, H., Lee, T., Stern, M., and Brandizzi, F. (2013) GTP-dependent membrane fusion. Annu Rev Cell Dev Biol 29: 529-550.
46. Martens, S., and McMahon, H.T. (2008) Mechanisms of membrane fusion: disparate players and common principles. Nat Rev Mol Cell Biol 9: 543-556.
47. Mendes, R., Kruijt, M., de Bruijn, I., Dekkers, E., van der Voort, M., Schneider, J.H., etal. (2011) Deciphering the rhizosphere microbiome for disease-suppressive bacteria. Science 332: 1097-1100.
48. Nakada, K., Inoue, K., Ono, T., Isobe, K., Ogura, A., Goto, Y.I., etal. (2001) Inter-mitochondrial complementation: mitochondria-specific system preventing mice from expression of disease phenotypes by mutant mtDNA. Nat Med 7: 934-940.
49. Nowak, M.A. (2006) Five rules for the evolution of cooperation. Science 314: 1560-1563.
50. Nudleman, E., Wall, D., and Kaiser, D. (2005) Cell-to-cell transfer of bacterial outer membrane lipoproteins. Science 309: 125-127.
51. Nudleman, E., Wall, D., and Kaiser, D. (2006) Polar assembly of the type IV pilus secretin in Myxococcus xanthus. Mol Microbiol 60: 16-29.
52. Pathak, D.T., and Wall, D. (2012) Identification of the cglC, cglD, cglE, and cglF genes and their role in cell contact-dependent gliding motility in Myxococcus xanthus. J Bacteriol 194: 1940-1949.
53. Pathak, D.T., Wei, X., Bucuvalas, A., Haft, D.H., Gerloff, D.L., and Wall, D. (2012a) Cell contact-dependent outer membrane exchange in myxobacteria: Genetic determinants and mechanism. PLoS Genet 8: e1002626.
54. Pathak, D.T., Wei, X., and Wall, D. (2012b) Myxobacterial tools for social interactions. Res Microbiol 163: 579-591.
55. Pathak, D.T., Wei, X., Dey, A., and Wall, D. (2013) Molecular recognition by a polymorphic cell surface receptor governs cooperative behaviors in bacteria. PLoS Genet 9: e1003891.
56. Queller, D.C., Ponte, E., Bozzaro, S., and Strassmann, J.E. (2003) Single-gene greenbeard effects in the social amoeba Dictyostelium discoideum. Science 299: 105-106.
57. Reichenbach, H. (1999) The ecology of the myxobacteria. Environ Microbiol 1: 15-21.
58. Reichenbach, H. (2001) Myxobacteria, producers of novel bioactive substances. J Ind Microbiol Biotechnol 27: 149-156.
59. Remis, J.P., Wei, D., Gorur, A., Zemla, M., Haraga, J., Allen, S., etal. (2013) Bacterial social networks: structure and composition of Myxococcus xanthus outer membrane vesicle chains. Environ Microbiol doi:10.1111/1462-2920.12187 (in press).
60. Rigden, D.J., Mello, L.V., and Galperin, M.Y. (2004) The PA14 domain, a conserved all-beta domain in bacterial toxins, enzymes, adhesins and signaling molecules. Trends Biochem Sci 29: 335-339.
61. Rodriguez, A.M., and Spormann, A.M. (1999) Genetic and molecular analysis of cglB, a gene essential for single-cell gliding in Myxococcus xanthus. J Bacteriol 181: 4381-4390.
62. Rodriguez-Soto, J.P., and Kaiser, D. (1997a) Identification and localization of the Tgl protein, which is required for Myxococcus xanthus social motility. J Bacteriol 179: 4372-4381.
63. Rodriguez-Soto, J.P., and Kaiser, D. (1997b) The tgl gene: social motility and stimulation in Myxococcus xanthus. J Bacteriol 179: 4361-4371.
64. Ruhe, Z.C., Wallace, A.B., Low, D.A., and Hayes, C.S. (2013) Receptor polymorphism restricts contact-dependent growth inhibition to members of the same species. mBio 4: e00480-13.
65. Saga, Y., Okada, H., and Yanagisawa, K. (1983) Macrocyst development in Dictyostelium discoideum. II. Mating-type-specific cell fusion and acquisition of fusion-competence. J Cell Sci 60: 157-168.
66. Sandoz, K.M., Mitzimberg, S.M., and Schuster, M. (2007) Social cheating in Pseudomonas aeruginosa quorum sensing. Proc Natl Acad Sci USA 104: 15876-15881.
67. Sherlock, O., Vejborg, R.M., and Klemm, P. (2005) The TibA adhesin/invasin from enterotoxigenic Escherichia coli is self recognizing and induces bacterial aggregation and biofilm formation. Infect Immun 73: 1954-1963.
68. Shimkets, L.J. (1999) Intercellular signaling during fruiting-body development of Myxococcus xanthus. Annu Rev Microbiol 53: 525-549.
69. Simunovic, V., Gherardini, F.C., and Shimkets, L.J. (2003) Membrane localization of motility, signaling, and polyketide synthetase proteins in Myxococcus xanthus. J Bacteriol 185: 5066-5075.
70. Smith, D.R., and Dworkin, M. (1994) Territorial interactions between two Myxococcus species. J Bacteriol 176: 1201-1205.
71. Smukalla, S., Caldara, M., Pochet, N., Beauvais, A., Guadagnini, S., Yan, C., etal. (2008) FLO1 is a variable green beard gene that drives biofilm-like cooperation in budding yeast. Cell 135: 726-737.
72. Strassmann, J.E., Gilbert, O.M., and Queller, D.C. (2011) Kin discrimination and cooperation in microbes. Annu Rev Microbiol 65: 349-367.
73. Tseng, T.T., Tyler, B.M., and Setubal, J.C. (2009) Protein secretion systems in bacterial-host associations, and their description in the Gene Ontology. BMC Microbiol 9 (Suppl. 1): S2.
74. Vos, M., and Velicer, G.J. (2006) Genetic population structure of the soil bacterium Myxococcus xanthus at the centimeter scale. Appl Environ Microbiol 72: 3615-3625.
75. Vos, M., and Velicer, G.J. (2009) Social conflict in centimeter-and global-scale populations of the bacterium Myxococcus xanthus. Curr Biol 19: 1763-1767.
76. Vos, M., Wolf, A.B., Jennings, S.J., and Kowalchuk, G.A. (2013) Micro-scale determinants of bacterial diversity in soil. FEMS Microbiol Rev 37: 936-954.
77. Wall, D. (2014) Social interactions mediated by outer membrane exchange. In Myxobacteria: Genomics, Cellular and Molecular Biology. Yang, Z., and Higgs, P.I. (eds). Norwich, UK: Caister Academic Press (in press).
78. Wall, D., and Kaiser, D. (1998) Alignment enhances the cell-to-cell transfer of pilus phenotype. Proc Natl Acad Sci USA 95: 3054-3058.
79. Wall, D., and Kaiser, D. (1999) Type IV pili and cell motility. Mol Microbiol 32: 1-10.
80. Wall, D., Wu, S.S., and Kaiser, D. (1998) Contact stimulation of Tgl and type IV pili in Myxococcus xanthus. J Bacteriol 180: 759-761.
81. Wei, X., Pathak, D.T., and Wall, D. (2011) Heterologous protein transfer within structured myxobacteria biofilms. Mol Microbiol 81: 315-326.
82. Wenren, L.M., Sullivan, N.L., Cardarelli, L., Septer, A.N., and Gibbs, K.A. (2013)) Two independent pathways for self-recognition in Proteus mirabilis are linked by type VI-dependent export. mBio 4: e00374-13.
83. Whitworth, D.E. (2008) Myxobacteria Multicellularity and Differentiation. Washington DC: ASM Press.
84. Wickner, W., and Schekman, R. (2008) Membrane fusion. Nat Struct Mol Biol 15: 658-664.
85. Wu, Z.H., Jiang, D.M., Li, P., and Li, Y.Z. (2005) Exploring the diversity of myxobacteria in a soil niche by myxobacteria-specific primers and probes. Environ Microbiol 7: 1602-1610.
86. Youle, R.J., and van der Bliek, A.M. (2012) Mitochondrial fission, fusion, and stress. Science 337: 1062-1065.