Effect of low-dose cadmium exposure on DNA methylation in the endangered European eel

Environmental Science and Technology

Volumn 48, Issue 1, 2014, Pages 797-803

  Pierron, Fabien ^a,b   Baillon, Lucie ^a,b   Sow, Mohamedou ^a,b   Gotreau, Salomé ^a,b   Gonzalez, Patrice ^a,b  

^a UNIVERSITÉ DE BORDEAUX   (France)

^b UNIVERSITÉ BORDEAUX 1   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ALKYLATION; BIOCHEMISTRY; CADMIUM; DNA SEQUENCES; GENES; METHYLATION; PLANTS (BOTANY);

CADMIUM EXPOSURE; CRITICALLY ENDANGERED; DNA HYPERMETHYLATION; INTRACELLULAR TRAFFICKING; LIPID BIOSYNTHESIS; PHOSPHATIDIC ACIDS; POLLUTANT EXPOSURES; SIGNALING PATHWAYS;

POLYMERASE CHAIN REACTION;

CADMIUM; GENOMIC DNA; PHOSPHATIDIC ACID; PROTEINASE K; RESTRICTION ENDONUCLEASE; RNA;

BIOASSAY; CADMIUM; CONCENTRATION (COMPOSITION); DNA; DOSE-RESPONSE RELATIONSHIP; ECOTOXICOLOGY; EEL; ENVIRONMENTAL STRESS; ETIOLOGY; GENE EXPRESSION; METHYLATION; POLLUTION EXPOSURE;

ANGUILLA ANGUILLA; ANGUILLA JAPONICA; ANIMAL TISSUE; ARTICLE; CHRONIC STRESS; CONTROLLED STUDY; DNA METHYLATION; DOWN REGULATION; ENVIRONMENTAL EXPOSURE; GENETIC TRANSCRIPTION; LIPOGENESIS; LIVER; NONHUMAN; RETROPOSON; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA SYNTHESIS; SIGNAL TRANSDUCTION; ANGUILLA; ANIMAL; CPG ISLAND; DRUG EFFECTS; ENDANGERED SPECIES; EUROPE; GENETICS; METABOLISM; REAL TIME POLYMERASE CHAIN REACTION; STATISTICAL MODEL;

ANGUILLA; ANIMALS; CADMIUM; CPG ISLANDS; DNA METHYLATION; ENDANGERED SPECIES; ENVIRONMENTAL EXPOSURE; EUROPE; LINEAR MODELS; REAL-TIME POLYMERASE CHAIN REACTION; RNA; TRANSCRIPTION, GENETIC;

EID: 84891820541     PISSN: 0013936X     EISSN: 15205851     Source Type: Journal    
DOI: 10.1021/es4048347     Document Type: Article

References (37)

1. Vandegehuchte, M.; Janssen, C. Epigenetics and its implications for ecotoxicology Ecotoxicology 2011, 20 (3) 607-624
2. Feil, R.; Fraga, M. F. Epigenetics and the environment: emerging patterns and implications Nat. Rev. Genet. 2012, 13 (2) 97-109
3. Head, J. A.; Dolinoy, D. C.; Niladri, B. Epigenetics for ecotoxicologists Environ. Toxicol. Chem. 2012, 31 (2) 221-227
4. Jaenisch, R.; Bird, A. Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals Nat. Genet. 2003, 33, 245-254
5. Jiang, G.; Xu, L.; Song, S.; Zhu, C.; Wu, Q.; Zhang, L.; Wu, L. Effects of long-term low-dose cadmium exposure on genomic DNA methylation in human embryo lung fibroblast cells Toxicology 2008, 244 (1) 49-55
6. Skinner, M. K.; Manikkam, M.; Guerrero-Bosagna, C. Epigenetic transgenerational actions of environmental factors in disease etiology Trends Endocrinol. Metab. 2010, 21 (4) 214-222
7. Nair, A. R.; Degheselle, O.; Smeets, K.; Van Kerkhove, E.; Cuypers, A. Cadmium-induced pathologies: where is the oxidative balance lost (or not)? Int. J. Mol. Sci. 2013, 14, 6116-6143
8. Stone, R. Freshwater eels are slip-sliding away Science 2003, 302 (5643) 221-22
9. Robinet, T. T.; Feunteun, E. E. Sublethal effects of exposure to chemical compounds: a cause for the decline in Atlantic eels? Ecotoxicology 2002, 11 (4) 265-277
10. Pierron, F.; Baudrimont, M.; Bossy, A.; Bourdineaud, J.-P.; Brèthes, D.; Elie, P.; Massabuau, J.-C. Impairment of lipid storage by cadmium in the European eel (Anguilla anguilla) Aquat. Toxicol. 2007, 81 (3) 304-311
11. Pierron, F.; Baudrimont, M.; Dufour, S.; Elie, P.; Bossy, A.; Baloche, S.; Mesmer-Dudons, N.; Gonzalez, P.; Bourdineaud, J.-P.; Massabuau, J.-C. How cadmium could compromise the completion of the European eel's reproductive migration Environ. Sci. Technol. 2008, 42, 4607-4612
12. Geeraerts, C.; Belpaire, C. The effects of contaminants in European eel: a review Ecotoxicology 2010, 19 (2) 239-266
13. Wilson, E. O. The Future of Life; Knopf: New York, 2003; p 256.
14. Couture, P.; Busby, P.; Gauthier, C.; Rajotte, J. W.; Pyle, G. G. Seasonal and regional variations of metal contamination and condition indicators in yellow perch (Perca flavescens) along two polymetallic gradients. I. Factors influencing tissue metal concentrations Hum. Ecol. Risk Assess. 2008, 14 (1) 97-125
15. Tryndyak, V.; Kovalchuk, O.; Pogribny, I. P. Identification of differentially methylated sites within unmethylated DNA domains in normal and cancer cells Anal. Biochem. 2006, 356 (2) 202-207
16. Henkel, C. V.; Dirks, R. P.; De Wijze, D. L.; Minegishi, Y.; Aoyama, J.; Jansen, H. J.; Turner, B.; Knudsen, B.; Bundgaard, M.; Hvam, K. L.; Boetzer, M.; Pirovano, W.; Weltzien, F.-A.; Dufour, S.; Tsukamoto, K.; Spaink, H. P.; Van Den Thillart, G.E. First draft genome sequence of the Japanese eel, Anguilla japonica Gene 2012, 511 (2) 195-201
17. Pujolar, J.; Marino, I.; Milan, M.; Coppe, A.; Maes, G.; Capoccioni, F.; Ciccotti, E.; Bervoets, L.; Covaci, A.; Belpaire, C.; Cramb, G.; Patarnello, T.; Bargelloni, L.; Bortoluzzi, S.; Zane, L. Surviving in a toxic world: transcriptomics and gene expression profiling in response to environmental pollution in the critically endangered European eel BMC Genomics 2012, 13, 507
18. Livak, K. J.; Schmittgen, T. D. Analysis of relative gene expression data using real-time quantitative PCR and the 2ΔCT method Methods 2001, 25 (4) 402-408
19. Zhang, Z.; Schwartz, S.; Wagner, L.; Miller, W. A greedy algorithm for aligning DNA sequences J. Comput. Biol. 2000, 7 (1-2) 203-14
20. Bailey, T. L.; Bodén, M.; Buske, F. A.; Frith, M.; Grant, C. E.; Clementi, L.; Ren, J.; Li, W. W.; Noble, W. S. MEME SUITE: tools for motif discovery and searching Nucleic Acids Res. 2009, 37, 202-208
21. Pearce, M. S.; Mcconnell, J. C.; Potter, C.; Barrett, L. M.; Parker, L.; Mathers, J. C.; Relton, C. L. Global LINE-1 DNA methylation is associated with blood glycaemic and lipid profiles Int. J. Epidemiol. 2012, 41, 210-217
22. Zhang, J.; Fu, Y.; Li, J.; Wang, J.; He, B.; Xu, S. Effects of subchronic cadmium poisoning on DNA methylation in hens Environ. Toxicol. Pharmacol. 2009, 27 (3) 345-349
23. Mirbahai, L.; Yin, G.; Bignell, J. P.; Li, N.; Williams, T. D.; Chipman, J. K. DNA methylation in liver tumorigenesis in fish from the environment Epigenetics 2011, 6 (11) 1319-1333
24. Badisa, V. L. D.; Latinwo, L. M.; Odewumi, C. O.; Ikediobi, C. O.; Badisa, R. B.; Ayuk-Takem, L. T.; Nwoga, J.; West, J. Mechanism of DNA damage by cadmium and interplay of antioxidant enzymes and agents Environ. Toxicol. 2007, 22 (2) 144-151
25. Choy, J. S.; Wei, S.; Lee, J. Y.; Tan, S.; Chu, S.; Lee, T.-H. DNA methylation increases nucleosome compaction and rigidity J. Am. Chem. Soc. 2010, 132 (6) 1782-1783
26. Cann, K. L.; Dellaire, G. Heterochromatin and the DNA damage response: the need to relax Biochem. Cell Biol. 2011, 89, 45-60
27. Wolff, N. A.; Lee, W.-K.; Thévenod, F. Role of Arf1 in endosomal trafficking of protein-metal complexes and cadmium-metallothionein-1 toxicity in kidney proximal tubule cells Toxicol. Lett. 2011, 203 (3) 210-218
28. Slotkin, R. K.; Martienssen, R. Transposable elements and the epigenetic regulation of the genome Nat. Rev. Genet. 2007, 8 (4) 272-285
29. Dowen, R. H.; Pelizola, M.; Schmitz, R. J.; Lister, R.; Dowen, J. M.; Nery, J. R.; Dixon, J. E.; Ecker, J. R. Widespread dynamic DNA methylation in response to biotic stress Proc. Natl. Acad. Sci. U. S. A. 2012, 109 (32) 2183-2191
30. Kashkush, K.; Feldman, M.; Levy, A. A. Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat Nat. Genet. 2003, 33, 102-106
31. Ito, H.; Yoshida, T.; Tsukahara, S.; Kawabe, A. Evolution of the ONSEN retrotransposon family activated upon heat stress in Brassicaceae Gene 2013, 518 (2) 256-261
32. Baccarelli, A.; Bollati, V. Epigenetics and environmental chemicals Curr. Opin. Pediatr. 2009, 21 (2) 243-251
33. Terry, M. B.; Delgado-Cruzata, L.; Vin-Raviv, N.; Wu, H. C.; Santella, R. M. DNA methylation in white blood cells: Association with risk factors in epidemiologic studies Epigenetics 2011, 6 (7) 828-837
34. Manifava, M.; Thuring, J. W. J. F.; Lim, Z.-Y.; Packman, L.; Holmes, A. B.; Ktistakis, N. T. Differential binding of traffic-related proteins to phosphatidic acid- or phosphatidylinositol (4,5)- bisphosphate-coupled affinity reagents J. Biol. Chem. 2001, 276, 8987-8994
35. Wang, X.; Devaiah, S. P.; Zhang, W.; Welti, R. Signaling functions of phosphatidic acid Prog. Lipid Res. 2006, 45 (3) 250-278
36. Shin, J.; Loewen, C. Putting the pH into phosphatidic acid signaling BMC Biol. 2011, 9, 85
37. Takiguchi, M.; Achanzar, W. E.; Qu, W.; Li, G.; Waalkes, M. P. Effects of cadmium on DNA-(cytosine-5) methyltransferase activity and DNA methylation status during cadmium-induced cellular transformation Exp. Cell Res. 2003, 286 (2) 355-365