메뉴 건너뛰기




Volumn 25, Issue 11, 2013, Pages 4691-4707

Two Rumex species from contrasting hydrological niches regulate flooding tolerance through distinct mechanisms

Author keywords

[No Author keywords available]

Indexed keywords

CARBON; ETHYLENE; ETHYLENE DERIVATIVE; ION; OXYGEN; PHYTOHORMONE;

EID: 84891508518     PISSN: 10404651     EISSN: 1532298X     Source Type: Journal    
DOI: 10.1105/tpc.113.119016     Document Type: Article
Times cited : (130)

References (90)
  • 1
    • 84861622722 scopus 로고    scopus 로고
    • Wait or escape? Contrasting submergence tolerance strategies of Rorippa amphibia, Rorippa sylvestris and their hybrid
    • Akman, M., Bhikharie, A.V., McLean, E.H., Boonman, A., Visser, E.J.W., Schranz, M.E., and van Tienderen, P.H. (2012). Wait or escape? Contrasting submergence tolerance strategies of Rorippa amphibia, Rorippa sylvestris and their hybrid. Ann. Bot. (Lond.) 109: 1263-1276.
    • (2012) Ann. Bot. (Lond.) , vol.109 , pp. 1263-1276
    • Akman, M.1    Bhikharie, A.V.2    McLean, E.H.3    Boonman, A.4    Visser, E.J.W.5    Schranz, M.E.6    van Tienderen, P.H.7
  • 3
    • 50349090461 scopus 로고    scopus 로고
    • Convergent energy and stress signaling
    • Baena-González, E., and Sheen, J. (2008). Convergent energy and stress signaling. Trends Plant Sci. 13: 474-482.
    • (2008) Trends Plant Sci. , vol.13 , pp. 474-482
    • Baena-González, E.1    Sheen, J.2
  • 4
    • 34548190012 scopus 로고    scopus 로고
    • A central integrator of transcription networks in plant stress and energy signalling
    • Baena-González, E., Rolland, F., Thevelein, J.M., and Sheen, J. (2007). A central integrator of transcription networks in plant stress and energy signalling. Nature 448: 938-942.
    • (2007) Nature , vol.448 , pp. 938-942
    • Baena-González, E.1    Rolland, F.2    Thevelein, J.M.3    Sheen, J.4
  • 5
    • 44949119488 scopus 로고    scopus 로고
    • Flooding stress: Acclimations and genetic diversity
    • Bailey-Serres, J., and Voesenek, L.A.C.J. (2008). Flooding stress: Acclimations and genetic diversity. Annu. Rev. Plant Biol. 59: 313-339.
    • (2008) Annu. Rev. Plant Biol. , vol.59 , pp. 313-339
    • Bailey-Serres, J.1    Voesenek, L.A.C.J.2
  • 6
    • 84873356152 scopus 로고    scopus 로고
    • Comparison of GC-MS and NMR for metabolite profiling of rice subjected to submergence stress
    • Barding, G.A., Jr., Béni, S., Fukao, T., Bailey-Serres, J., and Larive, C.K. (2013). Comparison of GC-MS and NMR for metabolite profiling of rice subjected to submergence stress. J. Proteome Res. 12: 898-909.
    • (2013) J. Proteome Res. , vol.12 , pp. 898-909
    • Barding Jr., G.A.1    Béni, S.2    Fukao, T.3    Bailey-Serres, J.4    Larive, C.K.5
  • 7
    • 84855554618 scopus 로고    scopus 로고
    • Differential metabolic regulation governed by the rice SUB1A gene during submergence stress and identification of alanylglycine by 1H NMR spectroscopy
    • Barding, G.A., Jr., Fukao, T., Béni, S., Bailey-Serres, J., and Larive, C.K. (2012). Differential metabolic regulation governed by the rice SUB1A gene during submergence stress and identification of alanylglycine by 1H NMR spectroscopy. J. Proteome Res. 11: 320-330.
    • (2012) J. Proteome Res. , vol.11 , pp. 320-330
    • Barding Jr., G.A.1    Fukao, T.2    Béni, S.3    Bailey-Serres, J.4    Larive, C.K.5
  • 10
  • 11
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford, M.M. (1976). A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72: 248-254.
    • (1976) Anal. Biochem. , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 12
    • 38649141490 scopus 로고    scopus 로고
    • Respiration of midges (Diptera; Chironomidae) in British Columbian lakes: Oxy-regulation, temperature and their role as palaeoindicators
    • Brodersen, K.P., Pedersen, O., Walker, I.R., and Jensen, M.T. (2008). Respiration of midges (Diptera; Chironomidae) in British Columbian lakes: Oxy-regulation, temperature and their role as palaeoindicators. Freshw. Biol. 53: 593-602.
    • (2008) Freshw. Biol. , vol.53 , pp. 593-602
    • Brodersen, K.P.1    Pedersen, O.2    Walker, I.R.3    Jensen, M.T.4
  • 13
    • 72749086875 scopus 로고    scopus 로고
    • C acid decarboxylases required for C photosynthesis are active in the mid-vein of the C species Arabidopsis thaliana, and are important in sugar and amino acid metabolism
    • Brown, N.J., et al. (2010). C acid decarboxylases required for C photosynthesis are active in the mid-vein of the C species Arabidopsis thaliana, and are important in sugar and amino acid metabolism. Plant J. 61: 122-133.
    • (2010) Plant J. , vol.61 , pp. 122-133
    • Brown, N.J.1
  • 14
    • 84901203610 scopus 로고
    • Rapid colorometric determination of nitrate in plant tissue by nitration of salicyclic acid
    • Catalaldo, D.A., Haroon, M., Schrader, L.E., and Youngs, V.L. (1975). Rapid colorometric determination of nitrate in plant tissue by nitration of salicyclic acid. Commun. Soil Sci. Plant Anal. 6: 71-80.
    • (1975) Commun. Soil Sci. Plant Anal. , vol.6 , pp. 71-80
    • Catalaldo, D.A.1    Haroon, M.2    Schrader, L.E.3    Youngs, V.L.4
  • 16
    • 68549135046 scopus 로고    scopus 로고
    • Flooding tolerance: Suites of plant traits in variable environments
    • Colmer, T.D., and Voesenek, L.A.C.J. (2009). Flooding tolerance: Suites of plant traits in variable environments. Funct. Plant Biol. 36: 665-681.
    • (2009) Funct. Plant Biol. , vol.36 , pp. 665-681
    • Colmer, T.D.1    Voesenek, L.A.C.J.2
  • 17
    • 16544379974 scopus 로고    scopus 로고
    • The roles of ethylene, auxin, abscisic acid, and gibberellin in the hyponastic growth of submerged Rumex palustris petioles
    • discussion 3001
    • Cox, M.C.H., Benschop, J.J., Vreeburg, R.A.M., Wagemaker, C.A.M., Moritz, T., Peeters, A.J.M., and Voesenek, L.A.C.J. (2004). The roles of ethylene, auxin, abscisic acid, and gibberellin in the hyponastic growth of submerged Rumex palustris petioles. Plant Physiol. 136: 2948-2960, discussion 3001.
    • (2004) Plant Physiol. , vol.136 , pp. 2948-2960
    • Cox, M.C.H.1    Benschop, J.J.2    Vreeburg, R.A.M.3    Wagemaker, C.A.M.4    Moritz, T.5    Peeters, A.J.M.6    Voesenek, L.A.C.J.7
  • 18
    • 33645053242 scopus 로고    scopus 로고
    • The stimulating effects of ethylene and auxin on petiole elongation and on hyponastic curvature are independent processes in submerged Rumex palustris
    • Cox, M.C.H., Peeters, A.J.M., and Voesenek, L.A.C.J. (2006). The stimulating effects of ethylene and auxin on petiole elongation and on hyponastic curvature are independent processes in submerged Rumex palustris. Plant Cell Environ. 29: 282-290.
    • (2006) Plant Cell Environ. , vol.29 , pp. 282-290
    • Cox, M.C.H.1    Peeters, A.J.M.2    Voesenek, L.A.C.J.3
  • 19
    • 32644481938 scopus 로고    scopus 로고
    • Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis
    • Czechowski, T., Stitt, M., Altmann, T., Udvardi, M.K., and Scheible, W.-R. (2005). Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiol. 139: 5-17.
    • (2005) Plant Physiol. , vol.139 , pp. 5-17
    • Czechowski, T.1    Stitt, M.2    Altmann, T.3    Udvardi, M.K.4    Scheible, W.-R.5
  • 22
    • 33846070061 scopus 로고    scopus 로고
    • Phosphoenolpyruvate carboxykinase in developing pea seeds is associated with tissues involved in solute transport and is nitrogenresponsive
    • Delgado-Alvarado, A., Walker, R.P., and Leegood, R.C. (2007). Phosphoenolpyruvate carboxykinase in developing pea seeds is associated with tissues involved in solute transport and is nitrogenresponsive. Plant Cell Environ. 30: 225-235.
    • (2007) Plant Cell Environ. , vol.30 , pp. 225-235
    • Delgado-Alvarado, A.1    Walker, R.P.2    Leegood, R.C.3
  • 23
    • 11144335485 scopus 로고    scopus 로고
    • The degradation of HFR1, a putative bHLH class transcription factor involved in light signaling, is regulated by phosphorylation and requires COP1
    • Duek, P.D., Elmer, M.V., van Oosten, V.R., and Fankhauser, C. (2004). The degradation of HFR1, a putative bHLH class transcription factor involved in light signaling, is regulated by phosphorylation and requires COP1. Curr. Biol. 14: 2296-2301.
    • (2004) Curr. Biol. , vol.14 , pp. 2296-2301
    • Duek, P.D.1    Elmer, M.V.2    van Oosten, V.R.3    Fankhauser, C.4
  • 24
    • 79959300621 scopus 로고    scopus 로고
    • Applications of next generation sequencing in molecular ecology of non-model organisms
    • Ekblom, R., and Galindo, J. (2011). Applications of next generation sequencing in molecular ecology of non-model organisms. Heredity (Edinb) 107: 1-15.
    • (2011) Heredity (Edinb) , vol.107 , pp. 1-15
    • Ekblom, R.1    Galindo, J.2
  • 25
    • 84920168449 scopus 로고    scopus 로고
    • Waterlogging and plant nutrient uptake
    • S. Mancuso and S.N. Shabala, eds (Heidelberg: Springer Verlag)
    • Elzenga, J.T.M., and van Veen, H. (2010). Waterlogging and plant nutrient uptake. In Waterlogging Signalling and Tolerance in Plants, S. Mancuso and S.N. Shabala, eds (Heidelberg: Springer Verlag), pp. 23-35.
    • (2010) Waterlogging Signalling and Tolerance in Plants , pp. 23-35
    • Elzenga, J.T.M.1    van Veen, H.2
  • 26
    • 0036529479 scopus 로고    scopus 로고
    • An efficient algorithmfor large-scale detection of protein families
    • Enright, A.J., Van Dongen, S., and Ouzounis, C.A. (2002). An efficient algorithmfor large-scale detection of protein families. Nucleic Acids Res. 30: 1575-1584.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 1575-1584
    • Enright, A.J.1    Van Dongen, S.2    Ouzounis, C.A.3
  • 27
    • 0033729470 scopus 로고    scopus 로고
    • Multiple signaling pathways in gene expression during sugar starvation. Pharmacological analysis of din gene expression in suspensioncultured cells of Arabidopsis
    • Fujiki, Y., Ito, M., Nishida, I., and Watanabe, A. (2000). Multiple signaling pathways in gene expression during sugar starvation. Pharmacological analysis of din gene expression in suspensioncultured cells of Arabidopsis. Plant Physiol. 124: 1139-1148.
    • (2000) Plant Physiol. , vol.124 , pp. 1139-1148
    • Fujiki, Y.1    Ito, M.2    Nishida, I.3    Watanabe, A.4
  • 28
    • 0035115793 scopus 로고    scopus 로고
    • Dark-inducible genes from Arabidopsis thaliana are associated with leaf senescence and repressed by sugars
    • Fujiki, Y., Yoshikawa, Y., Sato, T., Inada, N., Ito, M., Nishida, I., and Watanabe, A. (2001). Dark-inducible genes from Arabidopsis thaliana are associated with leaf senescence and repressed by sugars. Physiol. Plant. 111: 345-352.
    • (2001) Physiol. Plant. , vol.111 , pp. 345-352
    • Fujiki, Y.1    Yoshikawa, Y.2    Sato, T.3    Inada, N.4    Ito, M.5    Nishida, I.6    Watanabe, A.7
  • 29
    • 33747496374 scopus 로고    scopus 로고
    • A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice
    • Fukao, T., Xu, K., Ronald, P.C., and Bailey-Serres, J. (2006). A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice. Plant Cell 18: 2021-2034.
    • (2006) Plant Cell , vol.18 , pp. 2021-2034
    • Fukao, T.1    Xu, K.2    Ronald, P.C.3    Bailey-Serres, J.4
  • 30
    • 79955005679 scopus 로고    scopus 로고
    • The shade avoidance syndrome in Arabidopsis: A fundamental role for atypical basic helix-loop-helix proteins as transcriptional cofactors
    • Galstyan, A., Cifuentes-Esquivel, N., Bou-Torrent, J., and Martinez-Garcia, J.F. (2011). The shade avoidance syndrome in Arabidopsis: A fundamental role for atypical basic helix-loop-helix proteins as transcriptional cofactors. Plant J. 66: 258-267.
    • (2011) Plant J. , vol.66 , pp. 258-267
    • Galstyan, A.1    Cifuentes-Esquivel, N.2    Bou-Torrent, J.3    Martinez-Garcia, J.F.4
  • 32
    • 69149109855 scopus 로고    scopus 로고
    • The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water
    • Hattori, Y., et al. (2009). The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water. Nature 460: 1026-1030.
    • (2009) Nature , vol.460 , pp. 1026-1030
    • Hattori, Y.1
  • 33
    • 72449130407 scopus 로고    scopus 로고
    • Inhibition of the shade avoidance response by formation of non-DNA binding bHLH heterodimers
    • Hornitschek, P., Lorrain, S., Zoete, V., Michielin, O., and Fankhauser, C. (2009). Inhibition of the shade avoidance response by formation of non-DNA binding bHLH heterodimers. EMBO J. 28: 3893-3902.
    • (2009) EMBO J. , vol.28 , pp. 3893-3902
    • Hornitschek, P.1    Lorrain, S.2    Zoete, V.3    Michielin, O.4    Fankhauser, C.5
  • 34
    • 33745204478 scopus 로고    scopus 로고
    • KIDARI, encoding a non-DNA binding bHLH protein, represses light signal transduction in Arabidopsis thaliana
    • Hyun, Y., and Lee, I. (2006). KIDARI, encoding a non-DNA binding bHLH protein, represses light signal transduction in Arabidopsis thaliana. Plant Mol. Biol. 61: 283-296.
    • (2006) Plant Mol. Biol. , vol.61 , pp. 283-296
    • Hyun, Y.1    Lee, I.2
  • 35
    • 0012335274 scopus 로고
    • Naturally occurring auxin transport regulators
    • Jacobs, M., and Rubery, P.H. (1988). Naturally occurring auxin transport regulators. Science 241: 346-349.
    • (1988) Science , vol.241 , pp. 346-349
    • Jacobs, M.1    Rubery, P.H.2
  • 36
    • 14644408802 scopus 로고    scopus 로고
    • HFR1 is targeted by COP1 E3 ligase for post-translational proteolysis during phytochrome A signaling
    • Jang, I.C., Yang, J.Y., Seo, H.S., and Chua, N.H. (2005). HFR1 is targeted by COP1 E3 ligase for post-translational proteolysis during phytochrome A signaling. Genes Dev. 19: 593-602.
    • (2005) Genes Dev. , vol.19 , pp. 593-602
    • Jang, I.C.1    Yang, J.Y.2    Seo, H.S.3    Chua, N.H.4
  • 38
    • 84868326211 scopus 로고    scopus 로고
    • A comparative study of ethylene growth response kinetics in eudicots and monocots reveals a role for gibberellin in growth inhibition and recovery
    • Kim, J., Wilson, R.L., Case, J.B., and Binder, B.M. (2012). A comparative study of ethylene growth response kinetics in eudicots and monocots reveals a role for gibberellin in growth inhibition and recovery. Plant Physiol. 160: 1567-1580.
    • (2012) Plant Physiol. , vol.160 , pp. 1567-1580
    • Kim, J.1    Wilson, R.L.2    Case, J.B.3    Binder, B.M.4
  • 39
    • 5144219900 scopus 로고    scopus 로고
    • ABF2, an ABRE-binding bZIP factor, is an essential component of glucose signaling and its overexpression affects multiple stress tolerance
    • Kim, S., Kang, J.Y., Cho, D.I., Park, J.H., and Kim, S.Y. (2004). ABF2, an ABRE-binding bZIP factor, is an essential component of glucose signaling and its overexpression affects multiple stress tolerance. Plant J. 40: 75-87.
    • (2004) Plant J. , vol.40 , pp. 75-87
    • Kim, S.1    Kang, J.Y.2    Cho, D.I.3    Park, J.H.4    Kim, S.Y.5
  • 40
    • 33745602755 scopus 로고    scopus 로고
    • Overexpression of PRE1 and its homologous genes activates Gibberellin-dependent responses in Arabidopsis thaliana
    • Lee, S., Lee, S., Yang, K.Y., Kim, Y.M., Park, S.Y., Kim, S.Y., and Soh, M.S. (2006). Overexpression of PRE1 and its homologous genes activates Gibberellin-dependent responses in Arabidopsis thaliana. Plant Cell Physiol. 47: 591-600.
    • (2006) Plant Cell Physiol. , vol.47 , pp. 591-600
    • Lee, S.1    Lee, S.2    Yang, K.Y.3    Kim, Y.M.4    Park, S.Y.5    Kim, S.Y.6    Soh, M.S.7
  • 41
    • 0037763795 scopus 로고    scopus 로고
    • Regulation and roles of phosphoenolpyruvate carboxykinase in plants
    • Leegood, R.C., and Walker, R.P. (2003). Regulation and roles of phosphoenolpyruvate carboxykinase in plants. Arch. Biochem. Biophys. 414: 204-210.
    • (2003) Arch. Biochem. Biophys. , vol.414 , pp. 204-210
    • Leegood, R.C.1    Walker, R.P.2
  • 42
    • 84861403941 scopus 로고    scopus 로고
    • Dynamic antagonism between phytochromes and PIF family basic helix-loop-helix factors induces selective reciprocal responses to light and shade in a rapidly responsive transcriptional network in Arabidopsis
    • Leivar, P., Tepperman, J.M., Cohn, M.M., Monte, E., Al-Sady, B., Erickson, E., and Quail, P.H. (2012). Dynamic antagonism between phytochromes and PIF family basic helix-loop-helix factors induces selective reciprocal responses to light and shade in a rapidly responsive transcriptional network in Arabidopsis. Plant Cell 24: 1398-1419.
    • (2012) Plant Cell , vol.24 , pp. 1398-1419
    • Leivar, P.1    Tepperman, J.M.2    Cohn, M.M.3    Monte, E.4    Al-Sady, B.5    Erickson, E.6    Quail, P.H.7
  • 43
    • 78650883757 scopus 로고    scopus 로고
    • Arabidopsis transcription factor ELONGATED HYPOCOTYL5 plays a role in the feedback regulation of phytochrome A signaling
    • Li, J., Li, G., Gao, S., Martinez, C., He, G., Zhou, Z., Huang, X., Lee, J.-H., Zhang, H., Shen, Y., Wang, H., and Deng, X.W. (2010). Arabidopsis transcription factor ELONGATED HYPOCOTYL5 plays a role in the feedback regulation of phytochrome A signaling. Plant Cell 22: 3634-3649.
    • (2010) Plant Cell , vol.22 , pp. 3634-3649
    • Li, J.1    Li, G.2    Gao, S.3    Martinez, C.4    He, G.5    Zhou, Z.6    Huang, X.7    Lee, J.-H.8    Zhang, H.9    Shen, Y.10    Wang, H.11    Deng, X.W.12
  • 44
    • 0141519279 scopus 로고    scopus 로고
    • OrthoMCL: Identification of ortholog groups for eukaryotic genomes
    • Li, L., Stoeckert, C.J., Jr., and Roos, D.S. (2003). OrthoMCL: Identification of ortholog groups for eukaryotic genomes. Genome Res. 13: 2178-2189.
    • (2003) Genome Res. , vol.13 , pp. 2178-2189
    • Li, L.1    Stoeckert Jr., C.J.2    Roos, D.S.3
  • 45
    • 65449164910 scopus 로고    scopus 로고
    • AKINbeta1 is involved in the regulation of nitrogen metabolism and sugar signaling in Arabidopsis
    • Li, X.F., Li, Y.J., An, Y.H., Xiong, L.J., Shao, X.H., Wang, Y., and Sun, Y. (2009). AKINbeta1 is involved in the regulation of nitrogen metabolism and sugar signaling in Arabidopsis. J. Integr. Plant Biol. 51: 513-520.
    • (2009) J. Integr. Plant Biol. , vol.51 , pp. 513-520
    • Li, X.F.1    Li, Y.J.2    An, Y.H.3    Xiong, L.J.4    Shao, X.H.5    Wang, Y.6    Sun, Y.7
  • 47
    • 37749031518 scopus 로고    scopus 로고
    • Phytochrome-mediated inhibition of shade avoidance involves degradation of growth-promoting bHLH transcription factors
    • Lorrain, S., Allen, T., Duek, P.D., Whitelam, G.C., and Fankhauser, C. (2008). Phytochrome-mediated inhibition of shade avoidance involves degradation of growth-promoting bHLH transcription factors. Plant J. 53: 312-323.
    • (2008) Plant J. , vol.53 , pp. 312-323
    • Lorrain, S.1    Allen, T.2    Duek, P.D.3    Whitelam, G.C.4    Fankhauser, C.5
  • 48
    • 34249660074 scopus 로고    scopus 로고
    • Phosphoenolpyruvate carboxykinase in Arabidopsis: Changes in gene expression, protein and activity during vegetative and reproductive development
    • Malone, S., Chen, Z.H., Bahrami, A.R., Walker, R.P., Gray, J.E., and Leegood, R.C. (2007). Phosphoenolpyruvate carboxykinase in Arabidopsis: Changes in gene expression, protein and activity during vegetative and reproductive development. Plant Cell Physiol. 48: 441-450.
    • (2007) Plant Cell Physiol. , vol.48 , pp. 441-450
    • Malone, S.1    Chen, Z.H.2    Bahrami, A.R.3    Walker, R.P.4    Gray, J.E.5    Leegood, R.C.6
  • 49
    • 24744470311 scopus 로고    scopus 로고
    • Underwater photosynthesis in flooded terrestrial plants: A matter of leaf plasticity
    • Mommer, L., and Visser, E.J.W. (2005). Underwater photosynthesis in flooded terrestrial plants: A matter of leaf plasticity. Ann. Bot. (Lond.) 96: 581-589.
    • (2005) Ann. Bot. (Lond.) , vol.96 , pp. 581-589
    • Mommer, L.1    Visser, E.J.W.2
  • 50
    • 33749429957 scopus 로고    scopus 로고
    • Ecophysiological determinants of plant performance under flooding: A comparative study of seven plant families
    • Mommer, L., Lenssen, J.P.M., Huber, H., Visser, E.J.W., and De Kroon, H. (2006a). Ecophysiological determinants of plant performance under flooding: A comparative study of seven plant families. J. Ecol. 94: 1117-1129.
    • (2006) J. Ecol. , vol.94 , pp. 1117-1129
    • Mommer, L.1    Lenssen, J.P.M.2    Huber, H.3    Visser, E.J.W.4    De Kroon, H.5
  • 51
    • 30344450800 scopus 로고    scopus 로고
    • Photosynthetic consequences of phenotypic plasticity in response to submergence: Rumex palustris as a case study
    • Mommer, L., Pons, T.L., and Visser, E.J.W. (2006b). Photosynthetic consequences of phenotypic plasticity in response to submergence: Rumex palustris as a case study. J. Exp. Bot. 57: 283-290.
    • (2006) J. Exp. Bot. , vol.57 , pp. 283-290
    • Mommer, L.1    Pons, T.L.2    Visser, E.J.W.3
  • 52
    • 34748875991 scopus 로고    scopus 로고
    • Submergence-induced leaf acclimation in terrestrial species varying in flooding tolerance
    • Mommer, L., Wolters-Arts, M., Andersen, C., Visser, E.J.W., and Pedersen, O. (2007). Submergence-induced leaf acclimation in terrestrial species varying in flooding tolerance. New Phytol. 176: 337-345.
    • (2007) New Phytol. , vol.176 , pp. 337-345
    • Mommer, L.1    Wolters-Arts, M.2    Andersen, C.3    Visser, E.J.W.4    Pedersen, O.5
  • 53
    • 33645928738 scopus 로고    scopus 로고
    • Regulatory and functional interactions of plant growth regulators and plant glutathione S-transferases (GSTs)
    • Moons, A. (2005). Regulatory and functional interactions of plant growth regulators and plant glutathione S-transferases (GSTs). Vitam. Horm. 72: 155-202.
    • (2005) Vitam. Horm. , vol.72 , pp. 155-202
    • Moons, A.1
  • 54
    • 33750985693 scopus 로고    scopus 로고
    • Organ-specific analysis of the anaerobic primary metabolism in rice and wheat seedlings. I: Dark ethanol production is dominated by the shoots
    • Mustroph, A., Boamfa, E.I., Laarhoven, L.J.J., Harren, F.J.M., Albrecht, G., and Grimm, B. (2006). Organ-specific analysis of the anaerobic primary metabolism in rice and wheat seedlings. I: Dark ethanol production is dominated by the shoots. Planta 225: 103-114.
    • (2006) Planta , vol.225 , pp. 103-114
    • Mustroph, A.1    Boamfa, E.I.2    Laarhoven, L.J.J.3    Harren, F.J.M.4    Albrecht, G.5    Grimm, B.6
  • 55
    • 77949535960 scopus 로고    scopus 로고
    • Cross-kingdom comparison of transcriptomic adjustments to lowoxygen stress highlights conserved and plant-specific responses
    • Mustroph, A., Lee, S.C., Oosumi, T., Zanetti, M.E., Yang, H., Ma, K., Yaghoubi-Masihi, A., Fukao, T., and Bailey-Serres, J. (2010). Cross-kingdom comparison of transcriptomic adjustments to lowoxygen stress highlights conserved and plant-specific responses. Plant Physiol. 152: 1484-1500.
    • (2010) Plant Physiol. , vol.152 , pp. 1484-1500
    • Mustroph, A.1    Lee, S.C.2    Oosumi, T.3    Zanetti, M.E.4    Yang, H.5    Ma, K.6    Yaghoubi-Masihi, A.7    Fukao, T.8    Bailey-Serres, J.9
  • 57
    • 77951880520 scopus 로고    scopus 로고
    • Stunt or elongate? Two opposite strategies by which rice adapts to floods
    • Nagai, K., Hattori, Y., and Ashikari, M. (2010). Stunt or elongate? Two opposite strategies by which rice adapts to floods. J. Plant Res. 123: 303-309.
    • (2010) J. Plant Res. , vol.123 , pp. 303-309
    • Nagai, K.1    Hattori, Y.2    Ashikari, M.3
  • 58
    • 0001826913 scopus 로고
    • Total nitrogen determination in plant material by means of the indolphenolblue method
    • Novozamsky, I., van Eck, R., van Schouwenburg, J.C., and Walinga, I. (1974). Total nitrogen determination in plant material by means of the indolphenolblue method. Neth. J. Agric. Sci. 22: 3-5.
    • (1974) Neth. J. Agric. Sci. , vol.22 , pp. 3-5
    • Novozamsky, I.1    van Eck, R.2    van Schouwenburg, J.C.3    Walinga, I.4
  • 59
    • 0034713297 scopus 로고    scopus 로고
    • Targeted destabilization of HY5 during light-regulated development of Arabidopsis
    • Osterlund, M.T., Hardtke, C.S., Wei, N., and Deng, X.W. (2000). Targeted destabilization of HY5 during light-regulated development of Arabidopsis. Nature 405: 462-466.
    • (2000) Nature , vol.405 , pp. 462-466
    • Osterlund, M.T.1    Hardtke, C.S.2    Wei, N.3    Deng, X.W.4
  • 60
    • 0027143046 scopus 로고
    • Long-distance water transport in aquatic plants
    • Pedersen, O. (1993). Long-distance water transport in aquatic plants. Plant Physiol. 103: 1369-1375.
    • (1993) Plant Physiol. , vol.103 , pp. 1369-1375
    • Pedersen, O.1
  • 61
    • 33744949907 scopus 로고    scopus 로고
    • Oxygen dynamics during submergence in the halophytic stem succulent Halosarcia pergranulata
    • Pedersen, O., Vos, H., and Colmer, T.D. (2006). Oxygen dynamics during submergence in the halophytic stem succulent Halosarcia pergranulata. Plant Cell Environ. 29: 1388-1399.
    • (2006) Plant Cell Environ. , vol.29 , pp. 1388-1399
    • Pedersen, O.1    Vos, H.2    Colmer, T.D.3
  • 62
    • 0034989080 scopus 로고    scopus 로고
    • Signaling events in the hypoxic induction of alcohol dehydrogenase gene in Arabidopsis
    • Peng, H.P., Chan, C.S., Shih, M.C., and Yang, S.F. (2001). Signaling events in the hypoxic induction of alcohol dehydrogenase gene in Arabidopsis. Plant Physiol. 126: 742-749.
    • (2001) Plant Physiol. , vol.126 , pp. 742-749
    • Peng, H.P.1    Chan, C.S.2    Shih, M.C.3    Yang, S.F.4
  • 63
    • 78649724137 scopus 로고    scopus 로고
    • Growthmediated stress escape: Convergence of signal transduction pathways activated upon exposure to two different environmental stresses
    • Pierik, R., De Wit, M., and Voesenek, L.A.C.J. (2011). Growthmediated stress escape: Convergence of signal transduction pathways activated upon exposure to two different environmental stresses. New Phytol. 189: 122-134.
    • (2011) New Phytol. , vol.189 , pp. 122-134
    • Pierik, R.1    De Wit, M.2    Voesenek, L.A.C.J.3
  • 65
    • 58549108600 scopus 로고    scopus 로고
    • Is elongation-induced leaf emergence beneficial for submerged Rumex species?
    • Pierik, R., van Aken, J.M., and Voesenek, L.A.C.J. (2009). Is elongation-induced leaf emergence beneficial for submerged Rumex species? Ann. Bot. (Lond.) 103: 353-357.
    • (2009) Ann Bot. (Lond.) , vol.103 , pp. 353-357
    • Pierik, R.1    van Aken, J.M.2    Voesenek, L.A.C.J.3
  • 66
    • 0030773920 scopus 로고    scopus 로고
    • Ethylene enhances gibberellin levels and petiole sensitivity in flooding-tolerant Rumex palustris but not in flooding-intolerant R. acetosa
    • Rijnders, J.G.H.M., Yang, Y.Y., Kamiya, Y., Takahashi, N., Barendse, G.W.M., Blom, C.W.P.M., and Voesenek, L.A.C.J. (1997). Ethylene enhances gibberellin levels and petiole sensitivity in flooding-tolerant Rumex palustris but not in flooding-intolerant R. acetosa. Planta 203: 20-25.
    • (1997) Planta , vol.203 , pp. 20-25
    • Rijnders, J.G.H.M.1    Yang, Y.Y.2    Kamiya, Y.3    Takahashi, N.4    Barendse, G.W.M.5    Blom, C.W.P.M.6    Voesenek, L.A.C.J.7
  • 67
    • 77953176036 scopus 로고    scopus 로고
    • A scaling normalization method for differential expression analysis of RNA-seq data
    • Robinson, M.D., and Oshlack, A. (2010). A scaling normalization method for differential expression analysis of RNA-seq data. Genome Biol. 11: R25.
    • (2010) Genome Biol. , vol.11
    • Robinson, M.D.1    Oshlack, A.2
  • 68
    • 49749221698 scopus 로고
    • A modified ninhydrin colorimetric analysis for amino acids
    • Rosen, H. (1957). A modified ninhydrin colorimetric analysis for amino acids. Arch. Biochem. Biophys. 67: 10-15.
    • (1957) Arch. Biochem. Biophys. , vol.67 , pp. 10-15
    • Rosen, H.1
  • 69
    • 33644855398 scopus 로고    scopus 로고
    • The WAG1 and WAG2 protein kinases negatively regulate root waving in Arabidopsis
    • Santner, A.A., and Watson, J.C. (2006). The WAG1 and WAG2 protein kinases negatively regulate root waving in Arabidopsis. Plant J. 45: 752-764.
    • (2006) Plant J. , vol.45 , pp. 752-764
    • Santner, A.A.1    Watson, J.C.2
  • 70
    • 84857425782 scopus 로고    scopus 로고
    • Cell wall modifying proteins mediate plant acclimatization to biotic and abiotic stresses
    • Sasidharan, R., Voesenek, L.A., and Pierik, R. (2011). Cell wall modifying proteins mediate plant acclimatization to biotic and abiotic stresses. Crit. Rev. Plant Sci. 30: 548-562.
    • (2011) Crit. Rev. Plant Sci. , vol.30 , pp. 548-562
    • Sasidharan, R.1    Voesenek, L.A.2    Pierik, R.3
  • 71
    • 0030452599 scopus 로고    scopus 로고
    • The beneficial effect of reduced elongation growth on submergence tolerance in rice
    • Setter, T.L., and Laureles, E.V. (1996). The beneficial effect of reduced elongation growth on submergence tolerance in rice. J. Exp. Bot. 47: 1551-1559.
    • (1996) J. Exp. Bot. , vol.47 , pp. 1551-1559
    • Setter, T.L.1    Laureles, E.V.2
  • 72
    • 79953047294 scopus 로고    scopus 로고
    • Physiological and cellular aspects of phytotoxicity tolerance in plants: The role of membrane transporters and implications for crop breeding for waterlogging tolerance
    • Shabala, S. (2011). Physiological and cellular aspects of phytotoxicity tolerance in plants: The role of membrane transporters and implications for crop breeding for waterlogging tolerance. New Phytol. 190: 289-298.
    • (2011) New Phytol. , vol.190 , pp. 289-298
    • Shabala, S.1
  • 73
    • 0033167981 scopus 로고    scopus 로고
    • Hydrologically defined niches reveal a basis for species richness in plant communities
    • Silvertown, J., Dodd, M.E., Gowing, D.J.G., and Mountford, J.O. (1999). Hydrologically defined niches reveal a basis for species richness in plant communities. Nature 400: 61-63.
    • (1999) Nature , vol.400 , pp. 61-63
    • Silvertown, J.1    Dodd, M.E.2    Gowing, D.J.G.3    Mountford, J.O.4
  • 74
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical bayes methods for assessing differential expression in microarray experiments
    • Smyth, G.K. (2004). Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat. Appl. Genet. Mol. Biol. 3: e3.
    • (2004) Stat. Appl. Genet. Mol. Biol. , vol.3
    • Smyth, G.K.1
  • 75
    • 0032735095 scopus 로고    scopus 로고
    • Shade avoidance responses are mediated by the ATHB-2 HD-zip protein, a negative regulator of gene expression
    • Steindler, C., Matteucci, A., Sessa, G., Weimar, T., Ohgishi, M., Aoyama, T., Morelli, G., and Ruberti, I. (1999). Shade avoidance responses are mediated by the ATHB-2 HD-zip protein, a negative regulator of gene expression. Development 126: 4235-4245.
    • (1999) Development , vol.126 , pp. 4235-4245
    • Steindler, C.1    Matteucci, A.2    Sessa, G.3    Weimar, T.4    Ohgishi, M.5    Aoyama, T.6    Morelli, G.7    Ruberti, I.8
  • 76
    • 5144227616 scopus 로고    scopus 로고
    • Is tolerance to summer flooding correlated with distribution patterns in river floodplains? A comparative study of 20 terrestrial grassland species
    • van Eck, W.H.J.M., van de Steeg, H.M., Blom, C.W.P.M., and de Kroon, H. (2004). Is tolerance to summer flooding correlated with distribution patterns in river floodplains? A comparative study of 20 terrestrial grassland species. Oikos 107: 393-405.
    • (2004) Oikos , vol.107 , pp. 393-405
    • van Eck, W.H.J.M.1    van de Steeg, H.M.2    Blom, C.W.P.M.3    de Kroon, H.4
  • 77
    • 0037327037 scopus 로고    scopus 로고
    • Extreme flooding events on the Rhine and the survival and distribution of riparian plant species
    • Vervuren, P.J.A., Blom, C.W.P.M., and de Kroon, H. (2003). Extreme flooding events on the Rhine and the survival and distribution of riparian plant species. J. Ecol. 91: 135-146.
    • (2003) J. Ecol. , vol.91 , pp. 135-146
    • Vervuren, P.J.A.1    Blom, C.W.P.M.2    de Kroon, H.3
  • 78
    • 69149093808 scopus 로고    scopus 로고
    • Plant biology: Genetics of high-rise rice
    • Voesenek, L.A.C.J., and Bailey-Serres, J. (2009). Plant biology: Genetics of high-rise rice. Nature 460: 959-960.
    • (2009) Nature , vol.460 , pp. 959-960
    • Voesenek, L.A.C.J.1    Bailey-Serres, J.2
  • 79
    • 84876076734 scopus 로고    scopus 로고
    • Ethylene-and oxygen signalling-drive plant survival during flooding
    • Voesenek, L.A.C.J., and Sasidharan, R. (2013). Ethylene-and oxygen signalling-drive plant survival during flooding. Plant Biol (Stuttg) 15: 426-435.
    • (2013) Plant Biol (Stuttg) , vol.15 , pp. 426-435
    • Voesenek, L.A.C.J.1    Sasidharan, R.2
  • 80
    • 0027145446 scopus 로고
    • Submergenceinduced ethylene synthesis, entrapment, and growth in two plant species with contrasting flooding resistances
    • Voesenek, L.A.C.J., Banga, M., Thier, R.H., Mudde, C.M., Harren, F.J.M., Barendse, G.W.M., and Blom, C.W.P.M. (1993a). Submergenceinduced ethylene synthesis, entrapment, and growth in two plant species with contrasting flooding resistances. Plant Physiol. 103: 783-791.
    • (1993) Plant Physiol. , vol.103 , pp. 783-791
    • Voesenek, L.A.C.J.1    Banga, M.2    Thier, R.H.3    Mudde, C.M.4    Harren, F.J.M.5    Barendse, G.W.M.6    Blom, C.W.P.M.7
  • 82
    • 0027444414 scopus 로고
    • The role of flooding resistance in the establishment of Rumex seedlings in river flood plains
    • Voesenek, L.A.C.J., Van Oorschot, F.J.M.M., Smits, A.J.M., and Blom, C.W.P.M. (1993b). The role of flooding resistance in the establishment of Rumex seedlings in river flood plains. Funct. Ecol. 7: 105-114.
    • (1993) Funct. Ecol. , vol.7 , pp. 105-114
    • Voesenek, L.A.C.J.1    Van Oorschot, F.J.M.M.2    Smits, A.J.M.3    Blom, C.W.P.M.4
  • 84
    • 0033199645 scopus 로고    scopus 로고
    • 1-aminocyclopropane-1-carboxylate oxidase activity limits ethylene biosynthesis in Rumex palustris during submergence
    • Vriezen, W.H., Hulzink, R., Mariani, C., and Voesenek, L.A.C.J. (1999). 1-aminocyclopropane-1-carboxylate oxidase activity limits ethylene biosynthesis in Rumex palustris during submergence. Plant Physiol. 121: 189-196.
    • (1999) Plant Physiol. , vol.121 , pp. 189-196
    • Vriezen, W.H.1    Hulzink, R.2    Mariani, C.3    Voesenek, L.A.C.J.4
  • 85
    • 79960954205 scopus 로고    scopus 로고
    • Auxin Response Factor2 (ARF2) and its regulated homeodomain gene HB33 mediate abscisic acid response in Arabidopsis
    • Wang, L., Hua, D., He, J., Duan, Y., Chen, Z., Hong, X., and Gong, Z. (2011). Auxin Response Factor2 (ARF2) and its regulated homeodomain gene HB33 mediate abscisic acid response in Arabidopsis. PLoS Genet. 7: e1002172.
    • (2011) PLoS Genet. , vol.7
    • Wang, L.1    Hua, D.2    He, J.3    Duan, Y.4    Chen, Z.5    Hong, X.6    Gong, Z.7
  • 86
    • 0027651699 scopus 로고
    • Expression of the Arabidopsis AtAux2-11 auxin-responsive gene in transgenic plants
    • Wyatt, R.E., Ainley, W.M., Nagao, R.T., Conner, T.W., and Key, J.L. (1993). Expression of the Arabidopsis AtAux2-11 auxin-responsive gene in transgenic plants. Plant Mol. Biol. 22: 731-749.
    • (1993) Plant Mol. Biol. , vol.22 , pp. 731-749
    • Wyatt, R.E.1    Ainley, W.M.2    Nagao, R.T.3    Conner, T.W.4    Key, J.L.5
  • 88
    • 19544376094 scopus 로고    scopus 로고
    • Light regulates COP1-mediated degradation of HFR1, a transcription factor essential for light signaling in Arabidopsis
    • Yang, J., Lin, R., Sullivan, J., Hoecker, U., Liu, B., Xu, L., Deng, X.W., and Wang, H. (2005). Light regulates COP1-mediated degradation of HFR1, a transcription factor essential for light signaling in Arabidopsis. Plant Cell 17: 804-821.
    • (2005) Plant Cell , vol.17 , pp. 804-821
    • Yang, J.1    Lin, R.2    Sullivan, J.3    Hoecker, U.4    Liu, B.5    Xu, L.6    Deng, X.W.7    Wang, H.8
  • 89
    • 77953212372 scopus 로고    scopus 로고
    • Gene ontology analysis for RNA-seq: Accounting for selection bias
    • Young, M.D., Wakefield, M.J., Smyth, G.K., and Oshlack, A. (2010). Gene ontology analysis for RNA-seq: Accounting for selection bias. Genome Biol. 11: R14.
    • (2010) Genome Biol. , vol.11
    • Young, M.D.1    Wakefield, M.J.2    Smyth, G.K.3    Oshlack, A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.