Molecular analysis and clinical significance of lactobacillus spp. Recovered from clinical specimens presumptively associated with disease

Journal of Clinical Microbiology

Volumn 52, Issue 1, 2014, Pages 30-36

  Martinez, Raquel M ^a   Hulten, Kristina G ^b   Bui, Uyen ^c   Clarridge, Jill E ^b,c  

^a UNIVERSITY OF WASHINGTON   (United States)

^b BAYLOR COLLEGE OF MEDICINE   (United States)

^c VA PUGET SOUND HEALTH CARE SYSTEM   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; AGED; ARTICLE; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATE; BACTERIUM ISOLATION; COLONY FORMING UNIT; FEMALE; HUMAN; LACTOBACILLUS; LACTOBACILLUS CASEI; LACTOBACILLUS DELBRUECKII; LACTOBACILLUS GASSERI; LACTOBACILLUS JOHNSONII; LACTOBACILLUS PARACASEI; LACTOBACILLUS REUTERI; LACTOBACILLUS RHAMNOSUS; MALE; MIDDLE AGED; MOLECULAR DYNAMICS; NONHUMAN; PRIORITY JOURNAL; RETROSPECTIVE STUDY; VERY ELDERLY;

ADULT; AGED; AGED, 80 AND OVER; BACTERIAL INFECTIONS; DNA, BACTERIAL; DNA, RIBOSOMAL; FEMALE; HUMANS; LACTOBACILLUS; MALE; MIDDLE AGED; RETROSPECTIVE STUDIES; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA;

EID: 84891438484     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.02072-13     Document Type: Article

References (31)

1. Wade WG, Kononen E, Dessein R, Armand S, Courcol RJ. 2011. Propionibacterium, Lactobacillus, Actinomyces, and other non-sporeforming anaerobic Gram-positive rods. In Versalovic J, Carroll KC, Funke G, Jorgensen JH, Landry ML, Warnock DW (ed), Manual of clinical microbiology, 10th ed. ASM Press, Washington, DC.
2. Wallet F, Dessein R, Armand S, Courcol RJ. 2002. Molecular diagnosis of endocarditis due to Lactobacillus casei subsp. rhamnosus. Clin. Infect. Dis. 35:e117-e119. http://dx.doi.org/10.1086/344181.
3. Neef PA, Polenakovik H, Clarridge JE, Saklayen M, Bogard L, Bernstein JM. 2003. Lactobacillus paracasei continuous ambulatory peritoneal dialysis-related peritonitis and review of the literature. J. Clin. Microbiol. 41:2783-2784. http://dx.doi.org/10.1128/JCM.41.6.2783-2784.2003.
4. Ruoff KL, Kuritzkes DR, Wolfson JS, Ferraro MJ. 1988. Vancomycinresistant Gram-positive bacteria isolated from human sources. J. Clin. Microbiol. 26:2064-2068.
5. Tommasi C, Equitani F, Masala M, Ballardini M, Favaro M, Meledandri M, Fontana C, Narciso P, Nicastri E. 2008. Diagnostic difficulties of Lactobacillus casei bacteraemia in immunocompetent patients: A case report. J. Med. Case Rep. 2:315. http://dx.doi.org/10.1186/1752-1947-2-315.
6. Cannon JP, Lee TA, Bolanos JT, Danziger LH. 2005. Pathogenic relevance of Lactobacillus: A retrospective review of over 200 cases. Eur. J. Clin. Microbiol. Infect. Dis. 24:31-40. http://dx.doi.org/10.1007/s10096-004-1253-y.
7. Klein G, Zill E, Schindler R, Louwers J. 1998. Peritonitis associated with vancomycin-resistant Lactobacillus rhamnosus in a continuous ambulatory peritoneal dialysis patient: Organism identification, antibiotic therapy, and case report. J. Clin. Microbiol. 36:1781-1783.
8. Salminen MK, Rautelin H, Tynkkynen S, Poussa T, Saxelin M, Valtonen V, Jarvinen A. 2006. Lactobacillus bacteremia, species identification, and antimicrobial susceptibility of 85 blood isolates. Clin. Infect. Dis. 42:e35-e44. http://dx.doi.org/doi:10.1086/500214.
9. Cribby S, Taylor M, Reid G. 2008. Vaginal microbiota and the use of probiotics. Interdiscip. Perspect. Infect. Dis. 2008:256490. http://dx.doi.org/10.1155/2008/256490.
10. Merk K, Borelli C, Korting HC. 2005. Lactobacilli: Bacteria-host interactions with special regard to the urogenital tract. Int. J. Med. Microbiol. 295:9-18. http://dx.doi.org/10.1016/j.ijmm.2004.11.006.
11. Srinivasan S, Fredricks DN. 2008. The human vaginal bacterial biota and bacterial vaginosis. Interdiscip. Perspect. Infect. Dis. 2008:750479. http://dx.doi.org/10.1155/2008/750479.
12. Badet C, Thebaud NB. 2008. Ecology of lactobacilli in the oral cavity: A review of literature. Open Microbiol. J. 2:38-48. http://dx.doi.org/10 .2174/1874285800802010038.
13. Verna EC, Lucak S. 2010. Use of probiotics in gastrointestinal disorders: What to recommend? Therap. Adv. Gastroenterol. 3:307-319. http://dx.doi.org/10. 1177/1756283X10373814.
14. Koll-Klais P, Mandar R, Leibur E, Marcotte H, Hammarstrom L, Mikelsaar M. 2005. Oral lactobacilli in chronic periodontitis and periodontal health: Species composition and antimicrobial activity. Oral Microbiol. Immunol. 20:354-361. http://dx.doi.org/10.1111/j.1399-302X .2005.00239.x.
15. Shortt C, Rautelin H, Tynkkynen S, Poussa T, Saxelin M, Valtonen V, Jarvinen A. 1999. The probiotic century: Historical and current perspectives. Trends Food Sci. Technol. 10:411-417.
16. Szajewska H, Kotowska M, Mrukowicz JZ, Armanska M, Mikolajczyk W. 2001. Efficacy of Lactobacillus GG in prevention of nosocomial diarrhea in infants. J. Pediatr. 138:361-365. http://dx.doi.org/10.1067/mpd .2001.111321.
17. Johnston BC, Goldenberg JZ, Vandvik PO, Sun X, Guyatt GH. 2011. Probiotics for the prevention of pediatric antibiotic-associated diarrhea. Cochrane Database Syst. Rev.(2):CD004827. http://dx.doi.org/10.1002/14651858. CD004827.pub3.
18. Alvarez-Olmos MI, Oberhelman RA. 2001. Probiotic agents and infectious diseases: A modern perspective on a traditional therapy. Clin. Infect. Dis. 32:1567-1576. http://dx.doi.org/10.1086/320518.
19. Clayton RA, Sutton G, Hinkle PSJ, Bult C, Fields C. 1995. Intraspecific variation in small-subunit rRNA sequences in GenBank: Why single sequences may not adequately represent prokaryotic taxa. Int. J. Syst. Bacteriol. 45:595-599.
20. Park KS, Ki CS, Kang CI, Kim YJ, Chung DR, Peck KR, Song JH, Lee NY. 2012. Evaluation of the GenBank, EzTaxon, and BIBI services for molecular identification of clinical blood culture isolates that were unidentifiable or misidentified by conventional methods. J. Clin. Microbiol. 50:1792-1795. http://dx.doi.org/10.1128/JCM.00081-12.
21. Edgar RC. 2004. MUSCLE: Multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792-1797. http://dx.doi.org/10.1093/ nar/gkh340.
22. Jespers V, Menten J, Smet H, Poradosu S, Abdellati S, Verhelst R, Hardy L, Buve A, Crucitti T. 2012. Quantification of bacterial species of the vaginal microbiome in different groups of women, using nucleic acid amplification tests. BMC Microbiol. 12:83. http://dx.doi.org/10.1186/1471-2180-12-83.
23. Silvester ME, Dicks LM. 2003. Identification of lactic acid bacteria isolated from human vaginal secretions. Antonie Van Leeuwenhoek 83:117-123. http://dx.doi.org/10.1023/A:1023373023115.
24. Schleifer KH. 2009. Phylum XIII. Firmicutes Gibbons and Murray 1978, 5 (Firmacutes [sic] Gibbons and Murray 1978, 5), p 19-1317. In Vos P, Garrity G, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (ed), Bergey's manual of systematic bacteriology, 2nd ed, vol 3. Springer-Verlag, New York, NY.
25. Duskova M, Sedo O, Ksicova K, Zdrahal Z, Karpiskova R. 2012. Identification of lactobacilli isolated from food by genotypic methods and MALDI-TOF MS. Int. J. Food Microbiol. 159:107-114. http://dx.doi.org/10.1016/j. ijfoodmicro.2012.07.029.
26. McElvania Tekippe E, Shuey S, Winkler DW, Butler MA, Burnham CA. 2013. Optimizing identification of clinically relevant Gram-positive organisms by use of the Bruker Biotyper matrix-assisted laser desorption ionization-time of flight mass spectrometry system. J. Clin. Microbiol. 51:1421-1427. http://dx.doi.org/10.1128/JCM.02680-12.
27. Robin F, Paillard C, Marchandin H, Demeocq F, Bonnet R, Hennequin C. 2010. Lactobacillus rhamnosus meningitis following recurrent episodes of bacteremia in a child undergoing allogeneic hematopoietic stem cell transplantation. J. Clin. Microbiol. 48:4317-4319. http://dx.doi.org/10.1128/ JCM.00250-10.
28. Shoji H, Yoshida K, Niki Y. 2010. Lung abscess and pleuritis caused by Lactobacillus rhamnosus in an immunocompetent patient. J. Infect. Chemother. 16:45-48.
29. Nelson DE, Van Der Pol B, Dong Q, Revanna KV, Fan B, Easwaran S, Sodergren E, Weinstock GM, Diao L, Fortenberry JD. 2010. Characteristic male urine microbiomes associate with asymptomatic sexually transmitted infection. PLoS One 5:e14116. http://dx.doi.org/10.1371/journal.pone.0014116.
30. Siddiqui H, Nederbragt AJ, Lagesen K, Jeansson SL, Jakobsen KS. 2011. Assessing diversity of the female urine microbiota by high throughput sequencing of 16S rDNA amplicons. BMC Microbiol. 11:244. http://dx.doi.org/10.1186/1471- 2180-11-244.
31. Dickgiesser U, Weiss N, Fritsche D. 1984. Lactobacillus gasseri as the cause of septic urinary infection. Infection 12:14-16.