Organophosphorus pesticides detection using broad-specific single-stranded DNA based fluorescence polarization aptamer assay

Biosensors and Bioelectronics

Volumn 55, Issue , 2014, Pages 216-219

  Zhang, Cunzheng ^a,b   Wang, Li ^b   Tu, Zhui ^a   Sun, Xing ^b   He, Qinghua ^a   Lei, Zhaojing ^b   Xu, Chongxin ^b   Liu, Yuan ^b   Zhang, Xiao ^b   Yang, Jingyi ^b   Liu, Xianjin ^b   Xu, Yang ^a  

^a NANCHANG UNIVERSITY   (China)

^b INSTITUTE OF PLANT PROTECTION   (China)

Author keywords

DNA aptamer; Molecular beacon; Organophosphorus pesticides

Indexed keywords

DNA APTAMER; FLUORESCENCE POLARIZATION; LIMIT OF QUANTIFICATIONS; MOLECULAR BEACON; MOLECULAR DYNAMICS SIMULATIONS; ORGANOPHOS-PHORUS PESTICIDES; SYSTEMATIC EVOLUTION OF LIGANDS BY EXPONENTIAL ENRICHMENTS; VAN DER WAALS INTERACTIONS;

BINDING SITES; DNA; FLUORESCENCE; HYDROGEN BONDS; MOLECULAR DYNAMICS; VAN DER WAALS FORCES;

PESTICIDES;

APTAMER; ISOCARBOPHOS; OMETHOATE; ORGANOPHOSPHATE PESTICIDE; PESTICIDE; PHORATE; PROFENOFOS; SINGLE STRANDED DNA; UNCLASSIFIED DRUG;

ARTICLE; BINDING AFFINITY; BINDING COMPETITION; COMBINATORIAL CHEMISTRY; FLUORESCENCE POLARIZATION; HYDROGEN BOND; LIMIT OF QUANTITATION; MOLECULAR BEACON; MOLECULAR DOCKING; MOLECULAR DYNAMICS; MOLECULAR INTERACTION; PROCESS OPTIMIZATION; QUANTITATIVE ANALYSIS; STRUCTURE ANALYSIS;

DNA APTAMER; MOLECULAR BEACON; ORGANOPHOSPHORUS PESTICIDES;

APTAMERS, NUCLEOTIDE; BIOSENSING TECHNIQUES; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; ORGANOPHOSPHATES; PESTICIDES; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; SPECTROMETRY, FLUORESCENCE;

EID: 84891403525     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2013.12.020     Document Type: Article

References (20)

1. Anastassiades M., Lehotay S.J., Stajnbaher D., Schenck F.J. J. AOAC Int. 2003, 86:412-431.
2. Bruno J.G., Carrillo M.P., Phillips T., Vail N.K., Hanson D. J. Fluoresc. 2008, 18:867-876.
3. Burke D.H., Scates L., Andrews K., Gold L. J. Mol. Biol. 1996, 264:650-666.
4. Gold L., Polisky B., Uhlenbeck O., Yarus M. Annu. Rev. Biochem. 1995, 64:763-797.
5. Green L.S., Jellinek D., Bell C., Beebe L.A., Feistner B.D., Gill S.C., Jucker F.M., Janjic N. Chem. Biol. 1995, 2:683-695.
6. Hermann T., Patel D.J. Science 2000, 287:820-825.
7. Hsin J., Arkhipov A., Yin Y., Stone J.E., Schulten K. Curr. Protoc. Bioinforma. 2008, 24:1-48. (Chapter 5, Unit 5.7).
8. Humphrey W., Dalke A., Schulten K. J. Mol. Graph. 1996, 14:33-38.
9. Lato S.M., Ozerova N.D., He K., Sergueeva Z., Shaw B.R., Burke D.H. Nucleic Acids Res. 2002, 30:1401-1407.
10. Nonin-Lecomte S., Lin C.H., Patel D.J. Biophys. J. 2001, 81:3422-3431.
11. Nutiu R., Li Y.F. Angew. Chem. 2005, 117:1085-1089.
12. Phillips J.C., Braun R., Wang W., Gumbart J., Tajkhorshid E., Villa E., Chipot C., Skeel R.D., Kalé L., Schulten K. J. Comput. Chem. 2005, 26:1781-1802.
13. Pinheiro V.B., Taylor A.I., Cozens C., Abramov M., Renders M., Zhang S., Chaput J.C., Wengel J., Peak-Chew S.Y., McLaughlin S.H., Herdewijn P., Holliger P. Science 2012, 336:341-344.
14. Ruckman J., Green L.S., Beeson J., Waugh S., Gillette W.L., Henninger D.D., Claesson-Welsh L., Janjic N. J. Biol. Chem. 1998, 273:20556-20567.
15. Schroder A.R., Baumstark T., Riesner D. Nucleic Acids Res. 1998, 26(14):3449-3450.
16. Tuerk C., Gold L. Science 1990, 249:505-510.
17. Tyagi S., Kramer F.R. Nat. Biotechnol. 1996, 14:303-308.
18. Wang L., Liu X.J., Zhang Q., Zhang C.Z., Liu Y., Tu K., Tu J. Biotechnol. Lett. 2012, 34:869-874.
19. Yamamoto R., Baba T., Kumar P.K. Genes Cells 2000, 5:389-396.
20. Yoshida W., Sode K., Ikebukuro K. Anal. Chem. 2006, 78:3296-3303.