Identification and characterization of Rab7 from orange-spotted grouper, Epinephelus coioides

Fish and Shellfish Immunology

Volumn 36, Issue 1, 2014, Pages 19-26

  Fu, Jing ^a,b   Huang, Youhua ^a   Cai, Jia ^a,b   Wei, Shina ^a,b   Ouyang, Zhengliang ^a   Ye, Fuzhou ^c   Huang, Xiaohong ^a   Qin, Qiwei ^a  

^a SOUTH CHINA SEA INSTITUTE OF OCEANOLOGY   (China)

^b UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

^c SUN YAT SEN UNIVERSITY   (China)

Author keywords

Epinephelus coioides; Lysosome; Rab7; Singapore grouper iridovirus (SGIV); Virus replication

Indexed keywords

ANOPLOPOMA FIMBRIA; EPINEPHELINAE; EPINEPHELUS COIOIDES; IRIDOVIRUS; OREOCHROMIS NILOTICUS; SINGAPORE GROUPER IRIDOVIRUS;

DNA; RAB PROTEIN; RAB7 PROTEIN;

AMINO ACID SEQUENCE; ANIMAL; ANIMAL DISEASE; ARTICLE; CHEMISTRY; DNA SEQUENCE; DNA VIRUS INFECTION; EPINEPHELUS COIOIDES; FISH DISEASE; GENETICS; IMMUNOLOGY; IRIDOVIRUS; LYSOSOME; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PERCIFORMES; PHYLOGENY; POLYMERASE CHAIN REACTION; RAB7; SEQUENCE ALIGNMENT; SINGAPORE GROUPER IRIDOVIRUS (SGIV); VIROLOGY; VIRUS REPLICATION; WESTERN BLOTTING;

EPINEPHELUS COIOIDES; LYSOSOME; RAB7; SINGAPORE GROUPER IRIDOVIRUS (SGIV); VIRUS REPLICATION;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; BLOTTING, WESTERN; CLONING, MOLECULAR; DNA; DNA VIRUS INFECTIONS; FISH DISEASES; IRIDOVIRUS; MOLECULAR SEQUENCE DATA; PERCIFORMES; PHYLOGENY; POLYMERASE CHAIN REACTION; RAB GTP-BINDING PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; VIRUS REPLICATION;

EID: 84891166969     PISSN: 10504648     EISSN: 10959947     Source Type: Journal    
DOI: 10.1016/j.fsi.2013.10.002     Document Type: Article

References (36)

1. Stenmark H., Olkkonen V.M. The Rab GTPase family. Genome Biol 2001, 2(5):3007.
2. Somsel Rodman J., Wandinger-Ness A. Rab GTPases coordinate endocytosis. JCell Sci 2000, 113:183-192.
3. Hutagalung A.H., Novick P.J. Role of Rab GTPases in membrane traffic and cell physiology. Physiol Rev 2011, 91:119-149.
4. Feng Y., Press B., Wandinger-Ness A. Rab 7: an important regulator of late endocytic membrane traffic. JCell Biol 1995, 131:1435-1452.
5. Bucci C., Thomsen P., Nicoziani P., McCarthy J., van Deurs B. Rab7: a key to lysosome biogenesis. Mol Biol Cell 2000, 11:467-480.
6. Sieczkarski S.B., Whittaker G.R. Dissecting virus entry via endocytosis. JGen Virol 2002, 83:1535-1545.
7. Seto E.S., Bellen H.J., Lloyd T.E. When cell biology meets development: endocytic regulation of signaling pathways. Genes Dev 2002, 16:1314-1336.
8. Sieczkarski S.B., Whittaker G.R. Differential requirements of Rab5 and Rab7 for endocytosis of influenza and other enveloped viruses. Traffic 2003, 4:333-343.
9. Vonderheit A., Helenius A. Rab7 associates with early endosomes to mediate sorting and transport of semliki forest virus to late endosomes. PLoS Biol 2005, 3:1225-1238.
10. van der Schaar H.M., Rust M.J., Chen C., van der Ende-Metselaar H., Wilschut J., Zhuang X., et al. Dissecting the cell entry pathway of dengue virus by single-particle tracking in living cells. PLoS Pathog 2008, 4:e1000244.
11. Manna D., Aligo J., Xu C., Park W.S., Koc H., Heo W.D., et al. Endocytic Rab proteins are required for hepatitis C virus replication complex formation. Virology 2010, 398:21-37.
12. Caillet M., Janvier K., Pelchen-Matthews A., Delcroix-Genête D., Camus G., Marsh M., et al. Rab7A is required for efficient production of infectious HIV-1. PLoS Pathog 2011, 7:e1002347.
13. Xie X., Yang F. White spot syndrome virus VP24 interacts with VP28 and is involved in virus infection. JGen Virol 2006 Jul, 87(Pt 7):1903-1908.
14. Clark B.S., Winter M., Cohen A.R., Link B.A. Generation of Rab-based transgenic lines for invivo studies of endosome biology in zebrafish. Dev Dyn 2011, 240:2452-2465.
15. Qin Q.W., Chang S.F., Ngoh-Lim G.H., Gibson-Kueh S., Shi C., Lam T.J. Characterization of a novel ranavirus isolated from grouper Epinephelus tauvina. Dis Aquat Org 2003, 53:1-9.
16. Huang X., Huang Y., Ouyang Z., Xu L., Yan Y., Cui H., et al. Singapore grouper iridovirus, a large DNA virus, induces nonapoptotic cell death by a cell type dependent fashion and evokes ERK signaling. Apoptosis 2011, 16:831-845.
17. Huang X., Huang Y., Ouyang Z., Cai J., Yan Y., Qin Q. Roles of stress-activated protein kinases in the replication of Singapore grouper iridovirus and regulation of the inflammatory responses in grouper cells. JGen Virol 2011, 92:1292-1301.
18. Chinchar V.G. Ranaviruses (family Iridoviridae): emerging cold-blooded killers - brief review. Arch Virol 2002, 147:447-470.
19. Qin Q.W., Lam T.J., Sin Y.M., Shen H., Chang S.F., Ngoh G.H., et al. Electron microscopic observations of a marine fish iridovirus isolated from brown-spotted grouper, Epinephelus tauvina. JVirol Methods 2001, 98:17-24.
20. Huang X., Huang Y., Sun J., Han X., Qin Q. Characterization of two grouper Epinephelus akaara cell lines: application to studies of Singapore grouper iridovirus (SGIV) propagation and virus-host interaction. Aquaculture 2009, 292:172-179.
21. Huang Y., Huang X., Yan Y., Cai J., Ouyang Z., Cui H., et al. Transcriptome analysis of orange-spotted grouper (Epinephelus coioides) spleen in response to Singapore grouper iridovirus. BMC Genomics 2011, 12:556.
22. Huang X., Huang Y., Gong J., Yan Y., Qin Q. Identification and characterization ofa putative lipopolysaccharide-induced TNF-alpha factor (LITAF) homolog from Singapore grouper iridovirus. Biochem Biophys Res Commun 2008, 373:140-145.
23. Grosshans B.L., Ortiz D., Novick P. Rabs and their effectors: achieving specificity in membrane traffic. Proc Natl Acad Sci U S A 2006, 103:11821-11827.
24. Macovei A., Petrareanu C., Lazar C., Florian P., Branza-Nichita N. Regulation of hepatitis B virus infection by rab5, rab7, and the endolysosomal compartment. JVirol 2013, 87:6415-6427.
25. Zeng X., Carlin C.R. Host cell autophagy modulates early stages of adenovirus infections in airway epithelial cells. JVirol 2013, 87:2307-2319.
26. Cuesta-Geijo M.A., Galindo I., Hernáez B., Quetglas J.I., Dalmau-Mena I., Alonso C. Endosomal maturation, Rab7 GTPase and phosphoinositides in African swine fever virus entry. PLoS One 2012, 7:e48853.
27. Cheng C.Y., Shih W.L., Huang W.R., Chi P.I., Wu M.H., Liu H.J. Bovine ephemeral fever virus uses a clathrin-mediated and dynamin 2-dependent endocytosis pathway that requires Rab5 and Rab7 as well as microtubules. JVirol 2012, 86:13653-13661.
28. Hu Y.-H., Deng T., Sun L. The Rab1 GTPase of Sciaenops ocellatus modulates intracellular bacterial infection. Fish Shellfish Immunol 2011, 31:1005-1012.
29. Han F., Wang X., Huang X., Zheng J., Wang Z. Molecular cloning and functional characterization of a RabGTPase in large yellow croaker (Pseudosciaena crocea). Gene 2011, 473:125-132.
30. Mukhopadhyay A., Barbieri A.M., Funato K., Roberts R., Stahl P.D. Sequential actions of Rab5 and Rab7 regulate endocytosis in the Xenopus oocyte. JCell Biol 1997, 136:1227-1237.
31. Mainou B.A., Dermody T.S. Transport to late endosomes is required for efficient reovirus infection. JVirol 2012, 86:8346-8358.
32. Fraile-Ramos A., Cepeda V., Elstak E., van der Sluijs P. Rab27a is required for human cytomegalovirus assembly. PLoS One 2010, 5(12):e15318.
33. Rao Y., Su J., Yang C., Peng L., Feng X., Li Q. Characterizations of two grass carp Ctenopharyngodon idella HMGB2 genes and potential roles in innate immunity. Dev Comp Immunol 2013, 41:164-177.
34. Pfeffer S., Aivazian D. Targeting Rab GTPases to distinct membrane compartments. Nat Rev Mol Cell Biol 2004, 5:886-896.
35. Huang X.H., Huang Y.H., Yuan X.P., Zhang Q.Y. Electron microscopic examination of the viromatrix of Rana grylio virus in a fish cell line. J Virol Methods 2006, 133:117-123.
36. Zhao Z., Ke F., Huang Y.H., Zhao J.G., Gui J.F., Zhang Q.Y. Identification and characterization of a novel envelope protein in Rana grylio virus. J Gen Virol 2008, 89:1866-1872.