메뉴 건너뛰기




Volumn 23, Issue 12, 2013, Pages 2103-2114

The altered landscape of the human skin microbiome in patients with primary immunodeficiencies

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

EID: 84890535921     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.159467.113     Document Type: Article
Times cited : (207)

References (51)
  • 1
    • 84861987332 scopus 로고    scopus 로고
    • Taking stock of the human microbiome and disease
    • Balter M. 2012. Taking stock of the human microbiome and disease. Science 336: 1246-1247
    • (2012) Science , vol.336 , pp. 1246-1247
    • Balter, M.1
  • 2
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. 1995. Controlling the false discovery rate: A practical and powerful approach to multiple testing. J R Stat Soc Ser B Methodol 57: 289-300
    • (1995) J R Stat Soc Ser B Methodol , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 3
    • 56849089154 scopus 로고    scopus 로고
    • The origin of a methicillin-Resistant staphylococcus aureus isolate at a neonatal ward in sweden: Possible horizontal transfer of a staphylococcal cassette chromosome mec between methicillin-Resistant staphylococcus haemolyticus and staphylococcus aureus
    • Berglund C, Söderquist B. 2008. The origin of a methicillin- resistant Staphylococcus aureus isolate at a neonatal ward in Sweden: Possible horizontal transfer of a staphylococcal cassette chromosome mec between methicillin-resistant Staphylococcus haemolyticus and Staphylococcus aureus. Clin Microbiol Infect 14: 1048-1056
    • (2008) Clin Microbiol Infect , vol.14 , pp. 1048-1056
    • Berglund, C.1    Söderquist, B.2
  • 4
    • 0034909507 scopus 로고    scopus 로고
    • Fibronectin and fibrinogen contribute to the enhanced binding of staphylococcus aureus to atopic skin
    • Cho S-H, Strickland I, Boguniewicz M, Leung DYM. 2001. Fibronectin and fibrinogen contribute to the enhanced binding of Staphylococcus aureus to atopic skin. J Allergy Clin Immunol 108: 269- 274
    • (2001) J Allergy Clin Immunol , vol.108 , pp. 269-274
    • Cho, S.-H.1    Strickland, I.2    Boguniewicz, M.3    Leung, D.Y.M.4
  • 6
    • 27744480824 scopus 로고    scopus 로고
    • A similarity measure based on species proportions
    • Clayton MK, Yue JC. 2005. A similarity measure based on species proportions. Commun Statist-Theor Method 34: 2123-2131
    • (2005) Commun Statist-Theor Method , vol.34 , pp. 2123-2131
    • Clayton, M.K.1    Yue, J.C.2
  • 7
    • 84867391206 scopus 로고    scopus 로고
    • Species-Level analysis of DNA sequence data from the NIH human microbiome project
    • Conlan S, Kong HH, Segre JA. 2012. Species-level analysis of DNA sequence data from the NIH Human Microbiome Project. PLoS ONE 7: e47075
    • (2012) PLoS ONE , vol.7
    • Conlan, S.1    Kong, H.H.2    Segre, J.A.3
  • 9
    • 77951498518 scopus 로고    scopus 로고
    • AMD biofilms: Using model communities to study microbial evolution and ecological complexity in nature
    • Denef VJ, Mueller RS, Banfield JF. 2010. AMD biofilms: Using model communities to study microbial evolution and ecological complexity in nature. ISME J 4: 599-610
    • (2010) ISME J , vol.4 , pp. 599-610
    • Denef, V.J.1    Mueller, R.S.2    Banfield, J.F.3
  • 11
    • 35348961403 scopus 로고    scopus 로고
    • An ecological and evolutionary perspective on human-Microbe mutualism and disease
    • Dethlefsen L, McFall-Ngai M, Relman DA. 2007. An ecological and evolutionary perspective on human-microbe mutualism and disease. Nature 449: 811-818
    • (2007) Nature , vol.449 , pp. 811-818
    • Dethlefsen, L.1    McFall-Ngai, M.2    Relman, D.A.3
  • 14
    • 84879414990 scopus 로고    scopus 로고
    • Topographic diversity of fungal and bacterial communities in human skin
    • NIH Intramural Sequencing Center Comparative Sequencing Program, et al
    • Findley K, Oh J, Yang J, Conlan S, Deming C, Meyer JA, Schoenfeld D, Nomicos E, Park M, NIH Intramural Sequencing Center Comparative Sequencing Program, et al. 2013. Topographic diversity of fungal and bacterial communities in human skin. Nature 498: 367-370
    • (2013) Nature , vol.498 , pp. 367-370
    • Findley, K.1    Oh, J.2    Yang, J.3    Conlan, S.4    Deming, C.5    Meyer, J.A.6    Schoenfeld, D.7    Nomicos, E.8    Park, M.9
  • 15
    • 66349083859 scopus 로고    scopus 로고
    • Topographical and temporal diversity of the human skin microbiome
    • NISC Comparative Sequencing Program, Bouffard GG, Blakesley RW, Murray PR, et al
    • Grice EA, Kong HH, Conlan S, Deming CB, Davis J, Young AC, NISC Comparative Sequencing Program, Bouffard GG, Blakesley RW, Murray PR, et al. 2009. Topographical and temporal diversity of the human skin microbiome. Science 324: 1190-1192
    • (2009) Science , vol.324 , pp. 1190-1192
    • Grice, E.A.1    Kong, H.H.2    Conlan, S.3    Deming, C.B.4    Davis, J.5    Young, A.C.6
  • 18
    • 84862276328 scopus 로고    scopus 로고
    • Structure, function and diversity of the healthy human microbiome
    • The Human Microbiome Project Consortium
    • The Human Microbiome Project Consortium. 2012. Structure, function and diversity of the healthy human microbiome. Nature 486: 207-214
    • (2012) Nature , vol.486 , pp. 207-214
  • 19
    • 84862777442 scopus 로고    scopus 로고
    • Skin infection generates non-Migratory memory CD8+ TRM cells providing global skin immunity
    • Jiang X, Clark RA, Liu L, Wagers AJ, Fuhlbrigge RC, Kupper TS. 2012. Skin infection generates non-migratory memory CD8+ TRM cells providing global skin immunity. Nature 483: 227-231
    • (2012) Nature , vol.483 , pp. 227-231
    • Jiang, X.1    Clark, R.A.2    Liu, L.3    Wagers, A.J.4    Fuhlbrigge, R.C.5    Kupper, T.S.6
  • 22
    • 0030748405 scopus 로고    scopus 로고
    • Clinical validation and guidelines for the SCORAD index: Consensus report of the european task force on atopic dermatitis
    • Kunz B, Oranje AP, Labrèze L, Stalder JF, Ring J, Taïeb A. 1997. Clinical validation and guidelines for the SCORAD index: Consensus report of the European Task Force on Atopic Dermatitis. Dermatology (Basel) 195: 10-19
    • (1997) Dermatology (Basel) , vol.195 , pp. 10-19
    • Kunz, B.1    Oranje, A.P.2    Labrèze, L.3    Stalder, J.F.4    Ring, J.5    Taïeb, A.6
  • 23
    • 33846079739 scopus 로고    scopus 로고
    • The human anionic antimicrobial peptide dermcidin induces proteolytic defence mechanisms in staphylococci
    • Lai Y, Villaruz AE, Li M, Cha DJ, Sturdevant DE, Otto M. 2007. The human anionic antimicrobial peptide dermcidin induces proteolytic defence mechanisms in staphylococci. Mol Microbiol 63: 497-506
    • (2007) Mol Microbiol , vol.63 , pp. 497-506
    • Lai, Y.1    Villaruz, A.E.2    Li, M.3    Cha, D.J.4    Sturdevant, D.E.5    Otto, M.6
  • 25
    • 77958610660 scopus 로고    scopus 로고
    • Pplacer: Linear time maximumlikelihood and bayesian phylogenetic placement of sequences onto a fixed reference tree
    • Matsen F, Kodner R, Armbrust EV. 2010. pplacer: Linear time maximumlikelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree. BMC Bioinformatics 11: 538
    • (2010) BMC Bioinformatics , vol.11 , pp. 538
    • Matsen, F.1    Kodner, R.2    Armbrust, E.V.3
  • 27
    • 78650662845 scopus 로고    scopus 로고
    • DOCK8 immune deficiency as a model for primary cytoskeletal dysfunction
    • McGhee SA, Chatila TA. 2010. DOCK8 immune deficiency as a model for primary cytoskeletal dysfunction. Dis Markers 29: 151-156
    • (2010) Dis Markers , vol.29 , pp. 151-156
    • McGhee, S.A.1    Chatila, T.A.2
  • 28
    • 76949088006 scopus 로고    scopus 로고
    • Th17 cells, job's syndrome and HIV: Opportunities for bacterial and fungal infections
    • Milner JD, Sandler NG, Douek DC. 2010. Th17 cells, Job's syndrome and HIV: Opportunities for bacterial and fungal infections. Curr Opin HIV AIDS 5: 179-183
    • (2010) Curr Opin HIV AIDS , vol.5 , pp. 179-183
    • Milner, J.D.1    Sandler, N.G.2    Douek, D.C.3
  • 33
    • 84867220740 scopus 로고    scopus 로고
    • Shifts in human skin and nares microbiota of healthy children and adults
    • Oh J, Conlan S, Polley EC, Segre JA, Kong HH. 2012. Shifts in human skin and nares microbiota of healthy children and adults. Genome Medicine 4: 77
    • (2012) Genome Medicine , vol.4 , pp. 77
    • Oh, J.1    Conlan, S.2    Polley, E.C.3    Segre, J.A.4    Kong, H.H.5
  • 34
    • 34548573193 scopus 로고    scopus 로고
    • Practical issues on interpretation of scoring atopic dermatitis: The SCORAD index, objective SCORAD and the three-Item severity score
    • Oranje AP, Glazenburg EJ,Wolkerstorfer A, deWaard-van der Spek FB. 2007. Practical issues on interpretation of scoring atopic dermatitis: The SCORAD index, objective SCORAD and the three-item severity score. Br J Dermatol 157: 645-648
    • (2007) Br J Dermatol , vol.157 , pp. 645-648
    • Oranje, A.P.1    Glazenburg, E.J.2    Wolkerstorfer, A.3    DeWaard-Van Der Spek, F.B.4
  • 35
    • 0035821289 scopus 로고    scopus 로고
    • Staphylococcus aureus resistance to human defensins and evasion of neutrophil killing via the novel virulence factor Mprf is based on modification of membrane lipids with l-Lysine
    • Peschel A, Jack RW, Otto M, Collins LV, Staubitz P, Nicholson G, Kalbacher H, Nieuwenhuizen WF, Jung G, Tarkowski A, et al. 2001. Staphylococcus aureus resistance to human defensins and evasion of neutrophil killing via the novel virulence factor Mprf is based on modification of membrane lipids with l-lysine. J Exp Med 193: 1067-1076
    • (2001) J Exp Med , vol.193 , pp. 1067-1076
    • Peschel, A.1    Jack, R.W.2    Otto, M.3    Collins, L.V.4    Staubitz, P.5    Nicholson, G.6    Kalbacher, H.7    Nieuwenhuizen, W.F.8    Jung, G.9    Tarkowski, A.10
  • 36
    • 84877792673 scopus 로고    scopus 로고
    • Candida albicans-Staphylococcus aureus polymicrobial peritonitis modulates host innate immunity
    • Peters BM, Noverr MC. 2013. Candida albicans-Staphylococcus aureus polymicrobial peritonitis modulates host innate immunity. Infect Immun 81: 2178-2189
    • (2013) Infect Immun , vol.81 , pp. 2178-2189
    • Peters, B.M.1    Noverr, M.C.2
  • 37
    • 37549027613 scopus 로고    scopus 로고
    • SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
    • Pruesse E, Quast C, Knittel K, Fuchs BM, Ludwig W, Peplies J, Glöckner FO. 2007. SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35: 7188-7196
    • (2007) Nucleic Acids Res , vol.35 , pp. 7188-7196
    • Pruesse, E.1    Quast, C.2    Knittel, K.3    Fuchs, B.M.4    Ludwig, W.5    Peplies, J.6    Glöckner, F.O.7
  • 42
    • 0025622072 scopus 로고
    • The checkerboard score and species distributions
    • Stone L, Roberts A. 1990. The checkerboard score and species distributions. Oecologia 85: 74-79
    • (1990) Oecologia , vol.85 , pp. 74-79
    • Stone, L.1    Roberts, A.2
  • 45
    • 34548293679 scopus 로고    scopus 로고
    • Naive bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
    • Wang Q, Garrity GM, Tiedje JM, Cole Jr. 2007. Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73: 5261-5267
    • (2007) Appl Environ Microbiol , vol.73 , pp. 5261-5267
    • Wang, Q.1    Garrity, G.M.2    Tiedje, J.M.3    Cole, J.R.4
  • 47
    • 0027983717 scopus 로고
    • The U.K. Working party's diagnostic criteria for atopic dermatitis. 3. Independent hospital validation
    • Williams HC, Burney PG, Pembroke AC, Hay RJ. 1994. The U.K. Working Party's diagnostic criteria for atopic dermatitis. 3. Independent hospital validation. Br J Dermatol 131: 406-416
    • (1994) Br J Dermatol , vol.131 , pp. 406-416
    • Williams, H.C.1    Burney, P.G.2    Pembroke, A.C.3    Hay, R.J.4
  • 48
    • 0030003962 scopus 로고    scopus 로고
    • Validation of the U.K. Diagnostic criteria for atopic dermatitis in a population setting. U.K. Diagnostic criteria for atopic dermatitis working party
    • Williams HC, Burney PG, Pembroke AC, Hay RJ. 1996. Validation of the U.K. diagnostic criteria for atopic dermatitis in a population setting. U.K. Diagnostic Criteria for Atopic Dermatitis Working Party. Br J Dermatol 135: 12-17
    • (1996) Br J Dermatol , vol.135 , pp. 12-17
    • Williams, H.C.1    Burney, P.G.2    Pembroke, A.C.3    Hay, R.J.4
  • 49
    • 0036892212 scopus 로고    scopus 로고
    • Identification of a fibronectin-Binding protein from staphylococcus epidermidis
    • Williams RJ, Henderson B, Sharp LJ, Nair SP. 2002. Identification of a fibronectin-binding protein from Staphylococcus epidermidis. Infect Immun 70: 6805-6810
    • (2002) Infect Immun , vol.70 , pp. 6805-6810
    • Williams, R.J.1    Henderson, B.2    Sharp, L.J.3    Nair, S.P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.