Improvements in the order, isotropy and electron density of glypican-1 crystals by controlled dehydration

Acta Crystallographica Section D: Biological Crystallography

Volumn 69, Issue 12, 2013, Pages 2524-2533

  Awad, Wael ^a,b   Birkedal, Gabriel Svensson ^c   Thunnissen, Marjolein M G M ^a,d   Mani, Katrin ^c   Logan, Derek T ^a  

^a LUND UNIVERSITY   (Sweden)

^b CAIRO UNIVERSITY   (Egypt)

^c LUND UNIVERSITY   (Sweden)

^d LUND UNIVERSITY   (Sweden)

Author keywords

Crystal dehydration; Crystal packing; Diffraction anisotropy; Glypican 1; HC1; Optimization

Indexed keywords

GLYPICAN; WATER;

ANISOTROPY; ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; CRYSTAL DEHYDRATION; CRYSTAL PACKING; CRYSTALLIZATION; DIFFRACTION ANISOTROPY; ELECTRON; GLYPICAN-1; HC1; HUMAN; METHODOLOGY; OPTIMIZATION; PROTEIN CONFORMATION; X RAY CRYSTALLOGRAPHY;

CRYSTAL DEHYDRATION; CRYSTAL PACKING; DIFFRACTION ANISOTROPY; GLYPICAN-1; HC1; OPTIMIZATION;

ANISOTROPY; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; ELECTRONS; GLYPICANS; HUMANS; MODELS, MOLECULAR; PROTEIN CONFORMATION; WATER;

EID: 84889768100     PISSN: 09074449     EISSN: 13990047     Source Type: Journal    
DOI: 10.1107/S0907444913025250     Document Type: Article

References (33)

1. Adams, P. D. et al. (2010). Acta Cryst. D66, 213-221.
2. Afonine, P. V., Grosse-Kunstleve, R. W., Echols, N., Headd, J. J., Moriarty, N. W., Mustyakimov, M., Terwilliger, T. C., Urzhumtsev, A., Zwart, P. H. & Adams, P. D. (2012). Acta Cryst. D68, 352-367.
3. Battye, T. G. G., Kontogiannis, L., Johnson, O., Powell, H. R. & Leslie, A. G. W. (2011). Acta Cryst. D67, 271-281.
4. Bowler, M. W., Montgomery, M. G., Leslie, A. G. W. & Walker, J. E. (2006). Acta Cryst. D62, 991-995.
5. Brändén, C.-I. & Jones, T. A. (1990). Nature (London), 343, 687-689.
6. Chen, V. B., Arendall, W. B., Headd, J. J., Keedy, D. A., Immormino, R. M., Kapral, G. J., Murray, L. W., Richardson, J. S. & Richardson, D. C. (2010). Acta Cryst. D66, 12-21.
7. Dwivedi, P. P., Lam, N. & Powell, B. C. (2013). Cell Biochem. Funct. 31, 91-114.
8. Emsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. (2010). Acta Cryst. D66, 486-501.
9. Fico, A., Maina, F. & Dono, R. (2011). Cell. Mol. Life Sci. 68, 923-929.
10. Filmus, J., Capurro, M. & Rast, J. (2008). Genome Biol. 9, 224.
11. Fransson, L. A. (2003). Int. J. Biochem. Cell Biol. 35, 125-129.
12. Hagelueken, G., Huang, H., Harlos, K., Clarke, B., Whitfield, C. & Naismith, J. H. (2012). Acta Cryst. D68, 1371-1379.
13. Heras, B., Edeling, M. A., Byriel, K. A., Jones, A., Raina, S. & Martin, J. L. (2003). Structure, 11, 139-145.
14. Heras, B. & Martin, J. L. (2005). Acta Cryst. D61, 1173-1180.
15. Jen, Y.-H. L., Musacchio, M. & Lander, A. D. (2009). Neural Dev. 4, 33.
16. Kabsch, W. (2010). Acta Cryst. D66, 133-144.
17. Kiefersauer, R., Stetefeld, J., Gomis-Rüth, F. X., Romão, M. J., Lottspeich, F. & Huber, R. (1996). J. Appl. Cryst. 29, 311-317.
18. Kiefersauer, R., Than, M. E., Dobbek, H., Gremer, L., Melero, M., Strobl, S., Dias, J. M., Soulimane, T. & Huber, R. (2000). J. Appl. Cryst. 33, 1223-1230.
19. Krissinel, E. & Henrick, K. (2007). J. Mol. Biol. 372, 774-797.
20. Kyrieleis, O. J., Goettig, P., Kiefersauer, R., Huber, R. & Brandstetter, H. (2005). J. Mol. Biol. 349, 787-800.
21. McCoy, A. J., Grosse-Kunstleve, R. W., Adams, P. D., Winn, M. D., Storoni, L. C. & Read, R. J. (2007). J. Appl. Cryst. 40, 658-674.
22. Murshudov, G. N., Skubák, P., Lebedev, A. A., Pannu, N. S., Steiner, R. A., Nicholls, R. A., Winn, M. D., Long, F. & Vagin, A. A. (2011). Acta Cryst. D67, 355-367.
23. Newman, J. (2006). Acta Cryst. D62, 27-31.
24. Rupp, B. (2010). Biomolecular Crystallography: Principles, Practice, and Application to Structural Biology. New York: Garland Science.
25. Russi, S., Juers, D. H., Sanchez-Weatherby, J., Pellegrini, E., Mossou, E., Forsyth, V. T., Huet, J., Gobbo, A., Felisaz, F., Moya, R., McSweeney, S. M., Cusack, S., Cipriani, F. & Bowler, M. W. (2011). J. Struct. Biol. 175, 236-243.
26. Russo Krauss, I., Sica, F., Mattia, C. A. & Merlino, A. (2012). Int. J. Mol. Sci. 13, 3782-3800.
27. Sanchez-Weatherby, J., Bowler, M.W., Huet, J., Gobbo, A., Felisaz, F., Lavault, B., Moya, R., Kadlec, J., Ravelli, R. B. G. & Cipriani, F. (2009). Acta Cryst. D65, 1237-1246.
28. Strong, M., Sawaya, M. R., Wang, S., Phillips, M., Cascio, D. & Eisenberg, D. (2006). Proc. Natl Acad. Sci. USA, 103, 8060-8065.
29. Svensson, G., Awad, W., Håkansson, M., Mani, K. & Logan, D. T. (2012). J. Biol. Chem. 287, 14040-14051.
30. Ursby, T., Unge, J., Appio, R., Logan, D. T., Fredslund, F., Svensson, C., Larsson, K., Labrador, A. & Thunnissen, M. M. G. M. (2013). J. Synchrotron Rad. 20, 648-653.
31. Urzhumtseva, L., Afonine, P. V., Adams, P. D. & Urzhumtsev, A. (2009). Acta Cryst. D65, 297-300.
32. Vaguine, A. A., Richelle, J. & Wodak, S. J. (1999). Acta Cryst. D55, 191-205.
33. Winn, M. D. et al. (2011). Acta Cryst. D67, 235-242.