메뉴 건너뛰기




Volumn 8810, Issue , 2013, Pages

Magnetic trapping of single molecules: Principles, developments, and applications

Author keywords

DNA; Magnetic trapping; molecular motors; nanomanipulation; RNA polymerase; single molecule

Indexed keywords

MAGNETIC TRAPPING; MOLECULAR MOTORS; NANOMANIPULATIONS; RNA POLYMERASE; SINGLE-MOLECULE;

EID: 84889583227     PISSN: 0277786X     EISSN: 1996756X     Source Type: Conference Proceeding    
DOI: 10.1117/12.2027050     Document Type: Conference Paper
Times cited : (2)

References (23)
  • 1
    • 84862116464 scopus 로고    scopus 로고
    • High-force ndfeb-based magnetic tweezers device optimized for microrheology experiments
    • Lin, J. and Valentine, M. T., "High-force ndfeb-based magnetic tweezers device optimized for microrheology experiments.," Rev Sci Instrum 83, 053905 (2012).
    • (2012) Rev Sci Instrum , vol.83 , pp. 053905
    • Lin, J.1    Valentine, M.T.2
  • 3
    • 0026495432 scopus 로고
    • Direct Mechanical Measurements of the Elasticity of Single DNA Molecules by using Magnetic Beads
    • Smith, S., Finzi, L., and Bustamante, C., "Direct Mechanical Measurements of the Elasticity of Single DNA Molecules by using Magnetic Beads," Science 258, 1122-1126 (1992).
    • (1992) Science , vol.258 , pp. 1122-1126
    • Smith, S.1    Finzi, L.2    Bustamante, C.3
  • 5
    • 0036111913 scopus 로고    scopus 로고
    • Magnetic tweezers
    • Gosse, C. and Croquette, V., "Magnetic tweezers," Biophys. J. 82, 3314-3329 (2002).
    • (2002) Biophys. J. , vol.82 , pp. 3314-3329
    • Gosse, C.1    Croquette, V.2
  • 6
    • 80052404576 scopus 로고    scopus 로고
    • Freely orbiting magnetic tweezers to directly monitor changes in the twist of nucleic acids
    • Lipfert, J., Wiggin, M., Kerssemakers, J. W. J., Pedaci, F., and Dekker, N. H., "Freely orbiting magnetic tweezers to directly monitor changes in the twist of nucleic acids.," Nat Commun 2, 439 (2011).
    • (2011) Nat Commun , vol.2 , pp. 439
    • Lipfert, J.1    Wiggin, M.2    Kerssemakers, J.J.W.3    Pedaci, F.4    Dekker, N.H.5
  • 8
    • 84876346296 scopus 로고    scopus 로고
    • The helicase-like domains of type iii restriction enzymes trigger long-range diffusion along dna
    • Scharz, F., Toth, J., van Aelst, K., Cui, G., Clausing, S., Szczelkun, M., and Seidel, R., "The helicase-like domains of type iii restriction enzymes trigger long-range diffusion along dna.," Science 340, 353-356 (2013).
    • (2013) Science , vol.340 , pp. 353-356
    • Scharz, F.1    Toth, J.2    Van Aelst, K.3    Cui, G.4    Clausing, S.5    Szczelkun, M.6    Seidel, R.7
  • 9
  • 10
    • 84879682825 scopus 로고    scopus 로고
    • Transcription under torsion
    • Ma, J., Bai, L., and Wang, M. D., "Transcription under torsion.," Science 340, 1580-1583 (2013).
    • (2013) Science , vol.340 , pp. 1580-1583
    • Ma, J.1    Bai, L.2    Wang, M.D.3
  • 11
    • 0035804245 scopus 로고    scopus 로고
    • Direct observation of DNA rotation during transcription by Escherichia coli RNA polymerase
    • Harada, Y., Ohara, O., Takatsuki, A., Itoh, H., Shimamoto, N., and K. Kinosita, J., "Direct observation of DNA rotation during transcription by Escherichia coli RNA polymerase," Nature 409, 113-115 (2001).
    • (2001) Nature , vol.409 , pp. 113-115
    • Harada, Y.1    Ohara, O.2    Takatsuki, A.3    Itoh, H.4    Shimamoto, N.5    Kinosita J, K.6
  • 12
    • 1842788676 scopus 로고    scopus 로고
    • Promoter unwinding and promoter clearance by RNA polymerase: Detection by single-molecule DNA nanomanipulation
    • Revyakin, A., Ebright, R., and Strick, T., "Promoter unwinding and promoter clearance by RNA polymerase: detection by single-molecule DNA nanomanipulation.," Proc. Natl. Acad. Sci (USA) 101, 4776-4780 (2004).
    • (2004) Proc. Natl. Acad. Sci (USA) , vol.101 , pp. 4776-4780
    • Revyakin, A.1    Ebright, R.2    Strick, T.3
  • 13
    • 33751218319 scopus 로고    scopus 로고
    • Abortive initiation and productive initiation by RNA polymerase involve DNA scrunching
    • Revyakin, A., Liu, C.-Y., Ebright, R., and Strick, T., "Abortive initiation and productive initiation by RNA polymerase involve DNA scrunching," Science 314, 1139-1143 (2006).
    • (2006) Science , vol.314 , pp. 1139-1143
    • Revyakin, A.1    Liu, C.-Y.2    Ebright, R.3    Strick, T.4
  • 16
    • 79961181681 scopus 로고    scopus 로고
    • Real-time detection of cruciform extrusion by singlemolecule dna nanomanipulation
    • Ramreddy, T., Sachidanandam, R., and Strick, T., "Real-time detection of cruciform extrusion by singlemolecule dna nanomanipulation.," Nucleic Acids Res 39, 4275-4283 (2011).
    • (2011) Nucleic Acids Res , vol.39 , pp. 4275-4283
    • Ramreddy, T.1    Sachidanandam, R.2    Strick, T.3
  • 17
    • 70449095193 scopus 로고    scopus 로고
    • Characterization of photoactivated singlet oxygen damage in single-molecule optical trap experiments
    • Landry, M. P., McCall, P. M., Qi, Z., and Chemla, Y. R., "Characterization of photoactivated singlet oxygen damage in single-molecule optical trap experiments.," Biophys J 97, 2128-2136 (2009).
    • (2009) Biophys J , vol.97 , pp. 2128-2136
    • Landry, M.P.1    McCall, P.M.2    Qi, Z.3    Chemla, Y.R.4
  • 18
    • 23644449865 scopus 로고    scopus 로고
    • Single-molecule DNA nanomanipulation: Improved resolution through use of shorter DNA fragments
    • Revyakin, A., Ebright, R., and Strick, T., "Single-molecule DNA nanomanipulation: improved resolution through use of shorter DNA fragments.," Nat. Methods 2, 127-138 (2005).
    • (2005) Nat. Methods , vol.2 , pp. 127-138
    • Revyakin, A.1    Ebright, R.2    Strick, T.3
  • 19
    • 84857311371 scopus 로고    scopus 로고
    • Mechanism of transcription initiation at an activator-dependent promoter defined by single-molecule observation
    • Friedman, L. and Gelles, J., "Mechanism of transcription initiation at an activator-dependent promoter defined by single-molecule observation.," Cell 148, 679-689 (2012).
    • (2012) Cell , vol.148 , pp. 679-689
    • Friedman, L.1    Gelles, J.2
  • 20
    • 35348897239 scopus 로고    scopus 로고
    • Fluorescence-force spectroscopy maps two-dimensional reaction landscape of the holliday junction
    • Hohng, S., Zhou, R., Nahas, M., Yu, J., Schulten, K., Lilley, D., and Ha, T., "Fluorescence-force spectroscopy maps two-dimensional reaction landscape of the holliday junction.," Science 318, 279-283 (2007).
    • (2007) Science , vol.318 , pp. 279-283
    • Hohng, S.1    Zhou, R.2    Nahas, M.3    Yu, J.4    Schulten, K.5    Lilley, D.6    Ha, T.7
  • 21
    • 17444366080 scopus 로고    scopus 로고
    • Simultaneous, coincident optical trap and single-molecule fluorescence
    • Lang, M., Fordyce, P., Engh, A., Neuman, K., and Block, S., "Simultaneous, coincident optical trap and single-molecule fluorescence," Nat. Methods 1, 133-139 (2004).
    • (2004) Nat. Methods , vol.1 , pp. 133-139
    • Lang, M.1    Fordyce, P.2    Engh, A.3    Neuman, K.4    Block, S.5
  • 22
    • 0034690257 scopus 로고    scopus 로고
    • Single-molecule analysis of DNA uncoiling by a type II topoisomerase
    • Strick, T., Croquette, V., and Bensimon, D., "Single-molecule analysis of DNA uncoiling by a type II topoisomerase," Nature 404, 901-904 (2000).
    • (2000) Nature , vol.404 , pp. 901-904
    • Strick, T.1    Croquette, V.2    Bensimon, D.3
  • 23
    • 0345047725 scopus 로고    scopus 로고
    • Ubiquitous transcriptional pausing is independent of RNA polymerase bactracking
    • Neuman, K., Abbondanzieri, E., Landick, R., Gelles, J., and Block, S., "Ubiquitous transcriptional pausing is independent of RNA polymerase bactracking.," Cell 115, 437-447 (2003).
    • (2003) Cell , vol.115 , pp. 437-447
    • Neuman, K.1    Abbondanzieri, E.2    Landick, R.3    Gelles, J.4    Block, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.