Classical and Bayesian inference in fMRI

Advanced Image Processing in Magnetic Resonance Imaging

Volumn , Issue , 2005, Pages 541-563

  Penny, William D ^a   Friston, Karl J ^a  

^a UNIVERSITY COLLEGE LONDON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84888816397     PISSN: None     EISSN: None     Source Type: Book    
DOI: None     Document Type: Chapter

References (32)

1. Zeki, S., Watson, J.D., Lueck, C.J., Friston, K.J., Kennard, C., and Frackowiak, R.S. (1991). A direct demonstration of functional specialization in human visual cortex. J. Neurosci. Vol. 11, pp. 641-649.
2. Buchel, C., Coull, J., and Friston, K.J. (1999). The predictive value of changes in effective connectivity for human learning. Science 283 (5407), 1538-41.
3. Ungerleider, L.G. and Mishkin, M. (1982). in Analysis of Visual Behavior, Eds. Ingle, D.J., Goodale, M.A., and Mansfield, R.J.W. MIT Press, Cambridge, MA., 549-586.
4. Friston, K.J., Ashburner, J., Frith, C.D., Poline, J.-B., Heather, J.D., and Frackowiak, R.S.J. (1995). Spatial registration and normalization of images. Hum. Brain Mapp. 2: 165-189.
5. Friston, K.J., Williams, S., Howard, R., Frackowiak, R.S.J., and Turner, R. (1996). Movement-related effects in fMRI time series. Magn. Reson. Med. 35: 346-355.
6. Grootoonk, S., Hutton, C., Ashburner, J., Howseman, A.M., Josephs, O., Rees, G., Friston, K.J., and Turner, R. (2000). Characterization and correction of interpolation effects in the realignment of fMRI time series. NeuroImage. 11: 49-57.
7. Andersson, J.L., Hutton, C., Ashburner, J., Turner, R., and Friston, K. (2001). Modeling geometric deformations in EPI time series. NeuroImage. 13: 903-19.
8. Talairach, P. and Tournoux, J. (1988). A Stereotactic Coplanar Atlas of the Human Brain. Stuttgart Thieme.
9. Ashburner, J., Neelin, P., Collins, D.L., Evans, A., and Friston, K. (1997). Incorporating prior knowledge into image registration. NeuroImage 6: 344-352.
10. Jezzard, P. and Balaban, R.S. (1995). Correction for geometric distortion in echo-planar images from B0 field variations. Mag. Reson. Med. 34: 65-73.
11. Bandettini, P.A., Jesmanowicz, A., Wong, E.C., and Hyde, J.S. (1993). Processing strategies for time course data sets in functional MRI of the human brain. Magn. Reson. Med. 30: 161-173.
12. Worsley, K.J. and Friston, K.J. (1995). Analysis of fMRI time-series revisited -again. NeuroImage. 2: 173-181.
13. Friston, K.J., Penny, W., Phillips, C., Kiebel, S., Hinton, G., and Ashburner, J. (2002). Classical and Bayesian inference in neuroimaging: theory. NeuroImage. 16: 465-483.
14. Büchel, C., Wise, R.J.S., Mummery, C.J., Poline, J.-B., and Friston, K.J. (1996). Nonlinear regression in parametric activation studies. NeuroImage. 4: 60-66.
15. Friston, K.J., Jezzard, P.J., and Turner, R. (1994). Analysis of functional MRI time series. Hum. Brain Mapp. 1: 153-171.
16. Boynton, G.M., Engel, S.A., Glover, G.H., and Heeger, D.J. (1996). Linear systems analysis of functional magnetic resonance imaging in human V1. J. Neurosci. 16: 4207-4221.
17. Friston, K.J., Frith, C.D., Turner, R., and Frackowiak, R.S.J. (1995c). Characterizing evoked hemodynamics with fMRI. NeuroImage 2: 157-165.
18. Josephs, O., Turner, R., and Friston, K.J. (1997). Event-related fMRI. Hum. Brain Mapp. 5: 243-248.
19. Lange, N. and Zeger, S.L. (1997). Nonlinear Fourier time-series analysis for human brain mapping by functional magnetic resonance imaging (with discussion). J. Roy. Stat. Soc. Ser C. 46: 1-29.
20. Friston, K.J., Fletcher, P., Josephs, O., Holmes, A., Rugg, M.D., and Turner, R. (1998b) Event-related fMRI: Characterizing differential responses. NeuroImage. 7: 30-40.
21. Friston, K.J., Frith, C.D., Liddle, P.F., and Frackowiak, R.S.J. (1991). Comparing functional (PET) images: the assessment of significant change. J. Cereb. Blood Flow Metab. 11: 690-699.
22. Adler, R.J. (1981). in The Geometry of Random Fields. Wiley. New York.
23. Worsley, K.J., Evans, A.C., Marrett, S., and Neelin, P. (1992). A three-dimensional statistical analysis for rCBF activation studies in human brain. J Cereb. Blood Flow Metab. 12: 900-918.
24. Friston, K.J., Worsley, K.J., Frackowiak, R.S.J., Mazziotta, J.C., and Evans, A.C. (1994). Assessing the significance of focal activations using their spatial extent. Hum. Brain Mapp. 1: 214-220.
25. Worsley, K.J., Marrett, S., Neelin, P., Vandal, A.C., Friston, K.J., and Evans, A.C. (1996). A unified statistical approach for determining significant signals in images of cerebral activation. Hum. Brain Mapp. 4: 58-73.
26. Nichols, T.E. and Holmes, A.P. (2001). Nonparametric permutation tests for functional neuroimaging: a primer with examples. Hum. Brain Mapp. 15: 1-25.
27. Aguirre, G.K., Zarahn, E., and D'Esposito, M. (1998). A critique of the use of the Kolmogorov-Smirnov (KS) statistic for the analysis of BOLD fMRI data. Magn. Reson. Med. 39: 500-505.
28. Kiebel, S.J., Poline, J.B., Friston, K.J., Holmes, A.P., and Worsley, K.J. (1999). Robust smoothness estimation in statistical parametric maps using standardized residuals from the general linear model. NeuroImage. 10: 756-766.
29. Friston, K.J. and Penny, W. (2003). Posterior probability maps and SPMs. NeuroImage. 19(3): 1240-1249.
30. Büchel, C. and Friston, K.J. (1997). Modulation of connectivity in visual pathways by attention: Cortical interactions evaluated with structural equation modeling and fMRI. Cereb. Cortex. 7: 768-778.
31. Friston, K.J., Harrison, L., and Penny, W. (2003). Dynamic causal modeling. NeuroImage. 19(4): 1273-1302.
32. nd ed. Elsevier Academic Press.