Bioconjugation of gold and silver nanoparticles synthesized by Fusarium oxysporum and their use in rapid identification of Candida species by using bioconjugate-nano-polymerase chain reaction

Journal of Biomedical Nanotechnology

Volumn 9, Issue 12, 2013, Pages 1962-1971

  Bansod, Sunita ^a   Bonde, Shital ^a   Tiwari, Vaibhav ^a   Bawaskar, Manisha ^a   Deshmukh, Shivaji ^a   Gaikwad, Swapnil ^a   Gade, Aniket ^a   Rai, Mahendra ^a  

^a SANT GADGE BABA AMRAVATI UNIVERSITY   (India)

Author keywords

Bioconjugate; Candida; DNA; Gold nanoparticles; PCR molecular diagnostics; Silver nanoparticles; Therapeutics

Indexed keywords

BIOCONJUGATES; GOLD NANOPARTICLES; MOLECULAR DIAGNOSTICS; SILVER NANOPARTICLES; THERAPEUTICS;

BIOMOLECULES; CANDIDA; DNA; GENES; GOLD; METAL NANOPARTICLES; SILVER; SYNTHESIS (CHEMICAL); YEAST;

POLYMERASE CHAIN REACTION;

BETA TUBULIN; FUNGAL DNA; GOLD NANOPARTICLE; RIBOSOME DNA; SILVER NANOPARTICLE;

ARTICLE; BIOCONJUGATE NANO POLYMERASE CHAIN REACTION; CANDIDA; CANDIDA ALBICANS; CANDIDA GLABRATA; CANDIDA KRUSEI; CANDIDA PARAPSILOSIS; CANDIDA TROPICALIS; CONJUGATION; CONTROLLED STUDY; FUNGUS IDENTIFICATION; FUSARIUM OXYSPORUM; KLUYVEROMYCES MARXIANUS; MOLECULAR DIAGNOSTICS; MOLECULAR THERAPY; NONHUMAN; PICHIA GUILLIERMONDII; POLYMERASE CHAIN REACTION; SYNTHESIS; TIME;

CANDIDA; CANDIDIASIS; DNA, FUNGAL; FUSARIUM; GOLD; HUMANS; METAL NANOPARTICLES; MICROBIOLOGICAL TECHNIQUES; NANOCONJUGATES; PARTICLE SIZE; POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; SILVER; TIME FACTORS;

EID: 84888782203     PISSN: 15507033     EISSN: 15507041     Source Type: Journal    
DOI: 10.1166/jbn.2013.1727     Document Type: Article

References (40)

1. B. Mullis and A. Faloona, Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction. Methods Enzymol. 155, 335 (1987).
2. R. K. Saiki, D. H. Gelfand, S. Stoffel, S. J. Scharf, and R. Higuchi, Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239, 487 (1988).
3. H. Li, J. Huang, J. Lv, H. An, X. Zhang, Z. Zhang, C. Fan, and J. Hu, Nanoparticle PCR: Nanogold-assisted PCR with enhanced specificity. Angew. Chem. Int. Ed. 44, 2 (2005).
4. C. Ding and R. Cantor, Direct molecular haplotyping of long-range genomic DNA with M1-PCR. Proc. Nat. Acad. Sci. 100, 7449 (2003).
5. R. DeLong, C. M. Reynolds, Y. Malcolm, A. Schaeffer, T. Severs, and A. Wanekaya, Functionalized gold nanoparticles for the binding, stabilization, and delivery of therapeutic DNA, RNA, and other biological macromolecules. Nanotechnology, Science and Applications 3, 53 (2010).
6. Yi-C. Yeh, B. Creran, and V. M. Rotello, Gold nanoparticles: Preparation, properties, and applications in Bionanotechnology. Nanoscale 4, 1871 (2012).
7. L. Vigderman and E. Zubarev, Therapeutic platforms based on gold nanoparticles and their covalent conjugates with drug molecules. Advanced Drug Delivery Reviews 65, 663 (2013).
8. T. Pellegrino, A. Sperling, A. Alivisatos, and W. Parak, Gel electrophoresis of gold-DNA nanoconjugates. Journal of Biomedicine and Biotechnology 10, 1155 (2007).
9. L. Dykman and N. Khlebtsov, Gold nanoparticles in biomedical applications: Recent advances and perspectives. Chem. Soc. Rev. 41, 2256 (2012).
10. S. V. Komshian, A. K. Uwaydah, J. D. Sobel, and L. R. Crane, Fungemia caused by Candida species and Torulopsis glabrata in the hospitalized patient. Rev. Infect. Dis. 11, 37 (1989).
11. E. Reiss and C. J. Morrison, Nonculture methods for diagnosis of disseminated Candidiasis. Clin. Microbiol. Rev. 6, 311 (1993).
12. W. R. Jarvis, Epidemiology of nosocomial fungal infections, with emphasis on Candida species. Clin. Infect. Dis. 20, 1526 (1995).
13. R. P. Wenzel, Nosocomial candidemia: Risk factors and attribute mortality. Clin. Infect. Dis. 20, 1531 (1995).
14. E. Reiss, K. Tanaka, G. Bruker, V. Chazalet, D. Coleman, and J. P. Debeaupuis, Molecular diagnosis and epidemiology of fungal infections. Med. Mycol. 36, 249 (1998).
15. J. Jones, Laboratory diagnosis of invasive candidiasis. Clin. Microbiol. Rev. 3, 32 (1990).
16. L. Repentigny, L. D. Marr, J. W. Keller, A. W. Carter, R. J. Kuykendall, L. Kaufman, and E. Reiss, Comparison of enzyme immunoassay and gas-liquid chromatography for the rapid diagnosis of invasive candidiasis in cancer patients. J. Clin. Microbiol. 21, 972 (1985).
17. M. A. Lew, G. R. Siber, D. M. Donahue, and F. Maiorca, Enhanced detection with an enzyme linked immunosorbent assay of Candida in antibody-containing serum after heat extraction, J. Infect. Dis. 145, 45 (1982).
18. T. Walsh, W. Hathorn, J. Sobel, W. Merz, V. Sanchez, S. Maret, H. Buckley, M. Pfaller, R. Schaufele, C. Silvia, E. Navarron, J. Lecciones, P. Chandrasekar, J. Lee, and P. Pizzo, Detection of circulating Candida enolase by immunoassay in patients with cancer and invasive candidiasis. N. Engl. J. Med. 324, 1026 (1991).
19. T. G. Buchman, M. Rossier, W. G. Merz and P. Charache, Detection of surgical pathogens by in vitro DNA amplification. Part I. Rapid identification of C. albicans by in vitro amplification of a fungus-specific gene. Surgery 108, 338 (1990).
20. A. C. Crampin and R. C. Matthews, Application of the polymerase chain reaction to the diagnosis of candidiasis by amplification of an HSP 90 gene fragment. J. Med. Microbiol. 39, 233 (1993).
21. A. R. Holmes, R. D Cannon, M. G. Shepherd, and H. F. Jenkinson, Detection of Candida albicans and other yeasts in blood by PCR. J. Clin. Microbiol. 32, 228 (1994).
22. Y. Miyakawa, T. Mabuchi, K. Kagaya, and Y. Fukazawa, Isolation and characterization of a species specific DNA fragment for detection of Candida albicans by polymerase chain reaction. J. Clin. Microbiol. 30, 890 (1992).
23. S. Fujita, B. A. Lasker, T. I. Lott, E. Reiss, and C. J. Morrison, Micro titration plate enzyme immunoassay to detect PCR-amplified DNA from Candida species in blood, J. Clin. Microbiol. 33, 962 (1995).
24. J. H. Shin, F. S. Nolte, and C. J. Morrison, Rapid identification of Candida species in blood cultures by a clinically useful PCR method. J. Clin. Microbiol. 35, 1454 (1997).
25. G. Morace, L. Pagano, M. Sanguinetti, B. Posteraro, L. Mele, F. Equitani, G. D'Amore, G. Leone, and G. Fadda, PCR-restriction enzyme analysis for detection of Candida DNA in blood from febrile patients with hematological malignancies. J. Clin. Microbiol. 37, 1871 (1999).
26. N. Glass and G. Donaldson, Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Appl. Environ. Microbiol. 61, 1323 (1995).
27. K. O'Donnell, H. Nirenberg, T. Aoki, and E. Cigelnik, A Multigene phylogeny of the Gibberella fujikuroi species complex: Detection of additional phylogenetically distinct species. Mycoscience 41, 61 (2000).
28. P. Mulvaney. Surface Plasmon spectroscopy of nanosized metal particle. Langmuir 12, 788 (1996).
29. N. Roy, S. K. Laskar, D. Kumari, T. Ghosh, and N. A. Begum, Synthesis and characterizations of gold nanoparticles by Justicia gendarussa Burm F leaf extract. Food Chem. 126, 1115 (2011).
30. A. Moores and F. Goettmann. The plasmon band in noble metal nanoparticles: An introduction to theory and applications. New J. Chem. 30, 1121 (2006).
31. G. Bauer, J. Hassmann, H. Walter, J. Haglmüller, C. Mayer, and T. Schalkhammer, Resonant nanocluster technology from optical coding and high quality security features to biochips. Nanotechnology 14, 1289 (2003).
32. C. Fan, K. W. Plaxco, and A. J. Heeger, Comparing the properties of electrochemical-based DNA sensors employing different redox tags. Proc. Nat. Acad. Sci. USA 9134 (2003).
33. B. S. Gaylord, A. J. Heeger, and G. C. Bazan, DNA detection using water-soluble conjugated polymers and peptide nucleic acid probes. Proc. Nat. Acad. Sci. USA 99, 10954 (2002).
34. E. M. Boon, D. M. Ceres, T. G. Drummond, M. G. Hill, and J. K. Barton, Electrical detection of tata binding protein at DNA-modified microelectrodes. Nat. Biotechnol. 18, 1096 (2000).
35. H. Li and L. Rothberg, Colorimetric detection of DNA sequences based on electrostatic interactions with unmodified gold nanoparticles. Proc. Nat. Acad. Sci. USA 101, 14036 (2004).
36. T. A. Taton, C. A. Mirkin, and R. L. Letsinger, Immobilization of gold nanoparticles on solid supports utilizing DNA hybridization. Science 289, 1757 (2000).
37. R. Don, P. Cox, B. Wainwright, K. Baker, and J. Mattick, 'Touch-down' PCR to circumvent spurious priming during gene amplification. Nucleic Acids Res. 19, 4008 (1991).
38. J. Storhoff, R. Elghanian, C. Mirkin, and R. Letsinger, Sequence-dependent stability of DNA-modified gold nanoparticles. Langmuir 18, 6666 (2002).
39. V. Bloomfield, D. Crothers, and I. Tinoco, Nucleic acids: Structures, properties, and functions. University Science Books 39, 12970 (2000).
40. B. Gaylord, A. Heeger, and G. Bazan, Single base pair mismatch detection using cationic conjugated polymers through fluorescence resonance energy transfer. Proc. National Academy of Sciences USA 99, 10954 (2002).