Differential metabolic responses of clam Ruditapes philippinarum to Vibrio anguillarum and Vibrio splendidus challenges

Fish and Shellfish Immunology

Volumn 35, Issue 6, 2013, Pages 2001-2007

  Liu, Xiaoli ^a   Ji, Chenglong ^b   Zhao, Jianmin ^b   Wu, Huifeng ^b  

^a LUDONG UNIVERSITY   (China)

^b YANTAI INSTITUTE OF COASTAL ZONE RESEARCH   (China)

Author keywords

Hepatopancreas; Metabolomics; Ruditapes philippinarum; Vibrio anguillarum; Vibrio splendidus

Indexed keywords

BIVALVIA; LISTONELLA ANGUILLARUM; VENERUPIS (RUDITAPES) PHILIPPINARUM; VIBRIO; VIBRIO SPLENDIDUS;

BIOLOGICAL MARKER; MESSENGER RNA;

ANIMAL; ARTICLE; BIVALVE; GENETICS; HEPATOPANCREAS; IMMUNOLOGY; LISTONELLA ANGUILLARUM; METABOLISM; METABOLOME; METABOLOMICS; MULTIVARIATE ANALYSIS; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PHYSIOLOGY; REAL TIME POLYMERASE CHAIN REACTION; RUDITAPES PHILIPPINARUM; SPECIES DIFFERENCE; TWO DIMENSIONAL GEL ELECTROPHORESIS; VIBRIO; VIBRIO SPLENDIDUS;

HEPATOPANCREAS; METABOLOMICS; RUDITAPES PHILIPPINARUM; VIBRIO ANGUILLARUM; VIBRIO SPLENDIDUS;

ANIMALS; BIOLOGICAL MARKERS; BIVALVIA; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; HEPATOPANCREAS; MAGNETIC RESONANCE SPECTROSCOPY; METABOLOME; MULTIVARIATE ANALYSIS; REAL-TIME POLYMERASE CHAIN REACTION; RNA, MESSENGER; SPECIES SPECIFICITY; VIBRIO;

EID: 84888438980     PISSN: 10504648     EISSN: 10959947     Source Type: Journal    
DOI: 10.1016/j.fsi.2013.09.014     Document Type: Article

References (38)

1. Paillard C., Leroux F., Borrego J.J. Bacterial disease in marine bivalves: review of recent studies. Trends and evolution. Aquat Living Resour 2004, 17:477-498.
2. Ji C., Wu H., Wei L., Zhao J., Wang Q., Lu H. Responses of Mytilus galloprovincialis to bacterial challenges by metabolomics and proteomics. Fish Shellfish Immunol 2013, 35:489-498.
3. Wang X., Wang L., Zhang H., Ji Q., Song L., Qiu L., et al. Immune response and energy metabolism of Chlamys farreri under Vibrio anguillarum challenge and high temperature exposure. Fish Shellfish Immunol 2012, 33:1016-1026.
4. Wang X., Wang L., Yao C., Qiu L., Zhang H., Zhi Z., et al. Alternation of immune parameters and cellular energy allocation of Chlamys farreri under ammonia-N exposure and Vibrio anguillarum challenge. Fish Shellfish Immunol 2012, 32:741-749.
5. Yang S., Wang Y., Dong S. Progress of research on vibriosis in marine cultured fish. Mar Fisher Res 2005, 26:75-83. [in Chinese].
6. Wu X., Pan J., Jian J. Advances in studies on shellfish diseases: on microbial diseases of shellfish. Mar Sci Bullet 1995, 14:82-91.
7. Zhao Y., Zhang W., Xu W., Mai K., Zhang Y., Liufu Z. Effects of potential probiotic Bacillus subtilis T13 on growth, immunity and disease resistance against Vibrio splendidus infection in juvenile sea cucumber Apostichopus japonicas. Fish Shellfish Immunol 2012, 32:750-755.
8. Costa M.M., Prado-Alvarez M., Gestal C., Li H., Roch P., Novoa B., et al. Functional and molecular immune response of Mediterranean mussel (Mytilus galloprovincialis) haemocytes against pathogen-associated molecular patterns and bacteria. Fish Shellfish Immunol 2009, 26:515-523.
9. Zhou J., Zhu X., Cai Z. Tributyltin toxicity in abalone (Haliotis diversicolor supertexta) assessed by antioxidant enzyme activity, metabolic response, and histopathology. JHazard Mater 2010, 183:428-433.
10. Wu H., Wang W.-X. NMR-based metabolomic studies on the toxicological effects of cadmium and copper on green mussels Perna viridis. Aquat Toxicol 2010, 100:339-345.
11. Daviss B. Growing pains for metabolomics. The Scientist 2005, 19:5-8.
12. Bundy J.G., Lenz E.M., Bailey N.J., Gavaghan C.L., Svendsen C., Spurgeon D., et al. Metabonomic assessment of toxicity of 4-fluoroaniline, 3,5-difluoroaniline and 2-fluoro-4-methylaniline to the earthworm Eisenia veneta (Rosa): identification of new endogenous biomarkers. Environ Toxicol Chem 2002, 21:1966-1972.
13. Griffin J.L., Walker L.A., Garrod S., Holmes E., Shore R.F., Nicholson J.K. NMR spectroscopy based metabonomic studies on the comparative biochemistry of the kidney and urine of the bank vole (Clethrionomys glareolus), wood mouse (Apodemus sylvaticus), white toothed shrew (Crocidura suaveolens) and the laboratory rat. Comp Biochem Physiol B 2000, 127:357-367.
14. Fiehn O. Metabolomics-the link between genotypes and phenotypes. Plant Mol Biol 2002, 48:155-171.
15. Plumb R.S., Stumpf C.L., Granger J.H., Castro-Perez J., Haselden J.N., Dear G.J. Use of liquid chromatography/time-of-flight mass spectrometry and multivariate statistical analysis shows promise for the detection of drug metabolites in biological fluids. Rapid Commun Mass Spectrom 2003, 17:2632-2638.
16. Lindon J.C., Nicholson J.K., Holmes E., Everett J.R. Metabonomics: metabolic processes studied by NMR spectroscopy of biofluids. Concepts Magn Reson 2000, 12:289-320.
17. 1H nuclear magnetic resonance spectroscopy and pattern recognition. Anal Biochem 2005, 339:242-248.
18. 1H NMR spectroscopy of urine combined with pattern recognition. JInorg Biochem 2005, 99:644-651.
19. Lin C.Y., Wu H., Tjeerdema R.S., Viant M.R. Evaluation of metabolite extraction strategies from tissue samples using NMR metabolomics. Metabolomics 2007, 3:55-67.
20. Wu H., Southam A.D., Hines A., Viant M.R. High throughput tissue extraction protocol for NMR and mass spectrometry based metabolomics. Anal Biochem 2008, 372:204-212.
21. Dang W., Sun L. Determination of internal controls for quantitative real time RT-PCR analysis of the effect of Edwardsiella tarda infection on gene expression in turbot (Scophthalmus maximus). Fish Shellfish Immunol 2011, 30:720-728.
22. Livak K.J., Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 2001, 25:402-408.
23. Liu X., Zhang L., You L., Yu J., Zhao J., Li L., et al. Differential toxicological effects induced by mercury in gills from three pedigrees of Manila clam Ruditapes philippinarum by NMR-based metabolomics. Ecotoxicology 2011, 20:177-186.
24. Liu X., Zhang L., You L., Cong M., Zhao J., Wu H., et al. Toxicological responses to acute mercury exposure for three species of Manila clam Ruditapes philippinarum by NMR-based metabolomics. Environ Toxicol Pharmacol 2011, 31:323-332.
25. Parsons H.M., Ludwig C., Gunther U.L., Viant M. Improved classification accuracy in 1- and 2-dimensional NMR metabolomics data using the variance stabilising generalised logarithm transformation. BMC Bioinforma 2007, 8:234.
26. Feng J., Li J., Wu H., Chen Z. Metabolic responses of HeLa cells to silica nanoparticles by NMR-based metabolomic analyses. Metabolomics 2013, 9:874-886.
27. Feng J., Zhao J., Hao F., Chen C., Bhakoo K., Tang H. NMR-based metabonomics analyses of the effects of ultrasmall superparamagnetic particles of iron oxide (USPIO) on macrophage metabolism. JNanopart Res 2011, 13:2049-2062.
28. Fan W.M.T. Metabolite profiling by one- and two-dimensional NMR analysis of complex mixtures. Prog Nucl Magn Reson Spectros 1996, 28:161-219.
29. Ferrino L.A., Pierce S.K. Betaine aldehyde dehydrogenase kinetics partially account for oyster population differences in glycine betaine synthesis. JExp Zool 2000, 286:238-249.
30. Viant M.R., Rosenblum E.S., Tjeerdema R.S. NMR-based metabolomics: a powerful approach for characterizing the effects of environmental stressors on organism health. Environ Sci Technol 2003, 37:4982-4989.
31. Calder P.C. Branched chain amino acids and immunity. JNutr 2006, 136:288S-293S.
32. Arthur J.R. The glutathione peroxidases. Cell Mol Life Sci 2000, 57:1825-1835.
33. Doyen P., Vasseur P., Rodius F. Identification, sequencing and expression of selenium-dependent glutathione peroxidase transcript in the freshwater bivalve Unio tumidus exposed to Aroclor 1254. Comp Biochem Physiol C 2006, 144:122-129.
34. Mu C., Ni D., Zhao J., Wang L., Song L., Li L., et al. cDNA cloning and mRNA expression of a selenium-dependent glutathione peroxidase from Zhikong scallop Chlamys farreri. Comp Biochem Physiol B 2010, 157:182-188.
35. Hartl F.U., Hayer-Hartl M. Molecular chaperones in the cytosol: from nascent chain to folded protein. Science 2002, 295:1852-1858.
36. Zhao J., Li C., Chen A., Li L., Su X., Li T. Molecular characterization of a novel big defensin from clam Venerupis philippinarum. PLoS One 2010, 5:e13480.
37. Wang Q., Zhang L., Zhao J., You L., Wu H. Two goose-type lysozymes in Mytilus galloprovincialis: possible function diversification and adaptive evolution 2012, 7:e45148.
38. Hannam M.L., Bamber S.D., John Moody A., Galloway T.S., Jones M.B. Immunotoxicity and oxidative stress in the Arctic scallop Chlamys islandica: effects of acute oil exposure. Ecotoxicol Environ Saf 2010, 73:1440-1448.