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Volumn 12, Issue 4, 2013, Pages 5916-5925

Genetic diversity of Saccharum spontaneum from geographical regions of China assessed by simple sequence repeats

Author keywords

China; EST SSR; Genetic diversity; Saccharum spontaneum L.; SSR

Indexed keywords

ALLELE; ARTICLE; CHINA; CLUSTER ANALYSIS; CONTROLLED STUDY; CORRELATION ANALYSIS; EXPRESSED SEQUENCE TAG; GENETIC VARIABILITY; GEOGRAPHY; NONHUMAN; PLANT GENOME; SACCHARUM SPONTANEUM; SIMPLE SEQUENCE REPEAT; SUGARCANE;

EID: 84888402760     PISSN: None     EISSN: 16765680     Source Type: Journal    
DOI: 10.4238/2013.November.26.1     Document Type: Article
Times cited : (11)

References (38)
  • 1
    • 33845349733 scopus 로고    scopus 로고
    • Constituting a core collection of Saccharum spontaneum L. and comparison of three stratified random sampling procedures
    • Amalraj VA, Balakrishnan R, Jebadhas AW and Balasundaram N (2006). Constituting a core collection of Saccharum spontaneum L. and comparison of three stratified random sampling procedures. Genet. Resour. Crop Evol. 53: 1563-1572.
    • (2006) Genet. Resour. Crop Evol , vol.53 , pp. 1563-1572
    • Amalraj, V.A.1    Balakrishnan, R.2    Jebadhas, A.W.3    Balasundaram, N.4
  • 2
    • 0025835296 scopus 로고
    • Fast and sensitive silver staining of DNA in polyacrylamide gels
    • Bassam BJ, Caetano-Anolles G and Gresshoff PM (1991). Fast and sensitive silver staining of DNA in polyacrylamide gels. Anal. Biochem. 196: 80-83.
    • (1991) Anal. Biochem , vol.196 , pp. 80-83
    • Bassam, B.J.1    Caetano-Anolles, G.2    Gresshoff, P.M.3
  • 3
    • 0002010024 scopus 로고
    • Problems in breeding and cytology of sugar cane
    • Bremer G (1961). Problems in breeding and cytology of sugar cane. Euphytica 10: 59-78.
    • (1961) Euphytica , vol.10 , pp. 59-78
    • Bremer, G.1
  • 5
    • 84930474704 scopus 로고    scopus 로고
    • SRAP analysis of genetic diversity of nine native populations of wild sugarcane, Saccharum spontaneum from Sichuan
    • Chang D, Yang FY, Yan JJ, Wu YQ, et al. (2012). SRAP analysis of genetic diversity of nine native populations of wild sugarcane, Saccharum spontaneum from Sichuan, China. Genet. Mol. Res. 11: 1245-1253.
    • (2012) China. Genet. Mol. Res , vol.11 , pp. 1245-1253
    • Chang, D.1    Yang, F.Y.2    Yan, J.J.3    Wu, Y.Q.4
  • 6
    • 84865293150 scopus 로고
    • Chromosome number distribution of Saccharum spontaneum in the southwest region of China
    • Chen CL, Li LF and Wu SZ (1981). Chromosome number distribution of Saccharum spontaneum in the southwest region of China. Intl. Sugar J. 83: 264-267.
    • (1981) Intl. Sugar J , vol.83 , pp. 264-267
    • Chen, C.L.1    Li, L.F.2    Wu, S.Z.3
  • 7
    • 84861010816 scopus 로고    scopus 로고
    • Saccharum Linnaeus
    • (Poaceae) (Wu ZY, Raven PH and Hong DY, eds.). Missouri Botanical Garden Press, St. Louis
    • Chen SL and Phillips SM (2006). Saccharum Linnaeus. In: Flora of China Vol. 22 (Poaceae) (Wu ZY, Raven PH and Hong DY, eds.). Missouri Botanical Garden Press, St. Louis., 576-581.
    • (2006) Flora of China , vol.22 , pp. 576-581
    • Chen, S.L.1    Phillips, S.M.2
  • 8
    • 0035026747 scopus 로고    scopus 로고
    • Microsatellite markers from sugarcane (Saccharum spp.) ESTs cross transferable to Erianthus and Sorghum
    • Cordeiro GM, Casu R, McIntyre CL, Manners JM, et al. (2001). Microsatellite markers from sugarcane (Saccharum spp.) ESTs cross transferable to Erianthus and Sorghum. Plant Sci. 160: 1115-1123.
    • (2001) Plant Sci , vol.160 , pp. 1115-1123
    • Cordeiro, G.M.1    Casu, R.2    McIntyre, C.L.3    Manners, J.M.4
  • 9
    • 0001888090 scopus 로고
    • Cytoplasmic diversity in sugarcane revealed by heterologous probes
    • D'Hont A, Lu YH, Feldmann P and Glaszmann JC (1993). Cytoplasmic diversity in sugarcane revealed by heterologous probes. Sugarcane 1: 12-15.
    • (1993) Sugarcane , vol.1 , pp. 12-15
    • D'Hont, A.1    Lu, Y.H.2    Feldmann, P.3    Glaszmann, J.C.4
  • 10
    • 77955117317 scopus 로고    scopus 로고
    • Analysis on the parents of commercial varieties released in Mainland China in recent years
    • Deng HH and Zhang Q (2006). Analysis on the parents of commercial varieties released in Mainland China in recent years. Guangdong Agric. Sci. 12: 7-10.
    • (2006) Guangdong Agric. Sci , vol.12 , pp. 7-10
    • Deng, H.H.1    Zhang, Q.2
  • 11
    • 34547168853 scopus 로고    scopus 로고
    • EST-SSRs as a resource for population genetic analyses
    • Ellis JR and Burke JM (2007). EST-SSRs as a resource for population genetic analyses. Heredity 99: 125-132.
    • (2007) Heredity , vol.99 , pp. 125-132
    • Ellis, J.R.1    Burke, J.M.2
  • 13
    • 30544440501 scopus 로고    scopus 로고
    • Characteristics, development and mapping of Gossypium hirsutum derived EST-SSRs in allotetraploid cotton
    • Han Z, Wang C, Song X, Guo W, et al. (2006). Characteristics, development and mapping of Gossypium hirsutum derived EST-SSRs in allotetraploid cotton. Theor. Appl. Genet. 112: 430-439.
    • (2006) Theor. Appl. Genet , vol.112 , pp. 430-439
    • Han, Z.1    Wang, C.2    Song, X.3    Guo, W.4
  • 14
    • 0004271229 scopus 로고
    • CIMMYT Applied Molecular Genetics Laboratory. Mexico, D.F. CIMMYT
    • Hoisington D (1992). Laboratory Protocols. CIMMYT Applied Molecular Genetics Laboratory. Mexico, D.F. CIMMYT.
    • (1992) Laboratory Protocols
    • Hoisington, D.1
  • 15
    • 0000210258 scopus 로고
    • Nouvelles recherches sur la distribution forale
    • Jaccard P (1908). Nouvelles recherches sur la distribution forale. Bull. Soc. Vaudoise Sci. Nat. 44: 223-270.
    • (1908) Bull. Soc. Vaudoise Sci. Nat , vol.44 , pp. 223-270
    • Jaccard, P.1
  • 16
    • 0043015531 scopus 로고    scopus 로고
    • Microsatellites, from molecules to populations and back
    • Jarne P and Lagoda PJL (1996). Microsatellites, from molecules to populations and back. Trends Ecol. Evol. 11: 424-429.
    • (1996) Trends Ecol. Evol , vol.11 , pp. 424-429
    • Jarne, P.1    Lagoda, P.J.L.2
  • 17
    • 77955098740 scopus 로고    scopus 로고
    • AFLP analysis of genetic diversity in series sugarcane parents developed at HSBS
    • Lao FY, Liu R, He HY, Deng HH, et al. (2008). AFLP analysis of genetic diversity in series sugarcane parents developed at HSBS. Fenzi Zhiwu Yuzhong 6: 517-522.
    • (2008) Fenzi Zhiwu Yuzhong , vol.6 , pp. 517-522
    • Lao, F.Y.1    Liu, R.2    He, H.Y.3    Deng, H.H.4
  • 18
    • 0034666168 scopus 로고    scopus 로고
    • An optimized protocol for analysis of EST sequences
    • Liang F, Holt I, Pertea G, Karamycheva S, et al. (2000). An optimized protocol for analysis of EST sequences. Nucleic Acids Res. 28: 3657-3665.
    • (2000) Nucleic Acids Res , vol.28 , pp. 3657-3665
    • Liang, F.1    Holt, I.2    Pertea, G.3    Karamycheva, S.4
  • 19
    • 18744382780 scopus 로고    scopus 로고
    • PowerMarker: An integrated analysis environment for genetic marker analysis
    • Liu K and Muse SV (2005). PowerMarker: an integrated analysis environment for genetic marker analysis. Bioinformatics 21: 2128-2129.
    • (2005) Bioinformatics , vol.21 , pp. 2128-2129
    • Liu, K.1    Muse, S.V.2
  • 20
    • 79960655995 scopus 로고    scopus 로고
    • Functional markers for gene mapping and genetic diversity studies in sugarcane
    • Marconi TG, Costa EA, Miranda HR, Mancini MC, et al. (2011). Functional markers for gene mapping and genetic diversity studies in sugarcane. BMC Res. Notes 4: 264.
    • (2011) BMC Res. Notes , vol.4 , pp. 264
    • Marconi, T.G.1    Costa, E.A.2    Miranda, H.R.3    Mancini, M.C.4
  • 21
    • 77954663801 scopus 로고    scopus 로고
    • Analysis of genetic diversity among Saccharum spontaneum L. from four geographical regions of India, using molecular markers
    • Mary S, Nair N, Chaturvedi PK and Selvi A (2006). Analysis of genetic diversity among Saccharum spontaneum L. from four geographical regions of India, using molecular markers. Genet. Resour. Crop Evol. 53: 1221-1231.
    • (2006) Genet. Resour. Crop Evol , vol.53 , pp. 1221-1231
    • Mary, S.1    Nair, N.2    Chaturvedi, P.K.3    Selvi, A.4
  • 22
    • 0006919926 scopus 로고
    • Analysis of gene diversity in subdivided populations
    • Nei M (1973). Analysis of gene diversity in subdivided populations. Proc. Natl. Acad. Sci. U. S. A. 70: 3321-3323.
    • (1973) Proc. Natl. Acad. Sci. U. S. A , vol.70 , pp. 3321-3323
    • Nei, M.1
  • 23
    • 33846272344 scopus 로고    scopus 로고
    • Highly polymorphic microsatellite DNA markers for sugarcane germplasm evaluation and variety identity testing
    • Pan YB (2006). Highly polymorphic microsatellite DNA markers for sugarcane germplasm evaluation and variety identity testing. Sugar Tech 8: 246-256.
    • (2006) Sugar Tech , vol.8 , pp. 246-256
    • Pan, Y.B.1
  • 24
    • 33746444258 scopus 로고    scopus 로고
    • Characterization of novel sugarcane expressed sequence tag microsatellites and their comparison with genomic SSRs
    • Pinto LR, Oliveira KM, Marconi T, Garcia AAF, et al. (2006). Characterization of novel sugarcane expressed sequence tag microsatellites and their comparison with genomic SSRs. Plant Breed. 125: 378-384.
    • (2006) Plant Breed , vol.125 , pp. 378-384
    • Pinto, L.R.1    Oliveira, K.M.2    Marconi, T.3    Garcia, A.A.F.4
  • 25
    • 11144273819 scopus 로고    scopus 로고
    • Survey in the sugarcane expressed sequence tag database (SUCEST) for simple sequence repeats
    • Pinto LR, Oliveira KM, Ulian EC, Garcia AA, et al. (2004). Survey in the sugarcane expressed sequence tag database (SUCEST) for simple sequence repeats. Genome 47: 795-804.
    • (2004) Genome , vol.47 , pp. 795-804
    • Pinto, L.R.1    Oliveira, K.M.2    Ulian, E.C.3    Garcia, A.A.4
  • 26
    • 84888417469 scopus 로고    scopus 로고
    • Genetic diversity assessment of Saccharum spontaneum L. native to Guangdong area with agronomic traits
    • Qi Y, Fan LN, He HY, Chen YS, et al. (2009). Genetic diversity assessment of Saccharum spontaneum L. native to Guangdong area with agronomic traits. Sugarcane and Canesugar 3: 7-10.
    • (2009) Sugarcane and Canesugar , vol.3 , pp. 7-10
    • Qi, Y.1    Fan, L.N.2    He, H.Y.3    Chen, Y.S.4
  • 29
    • 79953700837 scopus 로고    scopus 로고
    • SSR and EST-SSR-based genetic linkage map of cassava (Manihot esculenta Crantz)
    • Sraphet S, Boonchanawiwat A, Thanyasiriwat T, Boonseng O, et al. (2011). SSR and EST-SSR-based genetic linkage map of cassava (Manihot esculenta Crantz). Theor. Appl. Genet. 122: 1161-1170.
    • (2011) Theor. Appl. Genet , vol.122 , pp. 1161-1170
    • Sraphet, S.1    Boonchanawiwat, A.2    Thanyasiriwat, T.3    Boonseng, O.4
  • 31
    • 0034948566 scopus 로고    scopus 로고
    • A core collection for Saccharum spontaneum L. from the world collection of sugarcane
    • Tai PYP and Miller JD (2001). A core collection for Saccharum spontaneum L. from the world collection of sugarcane. Crop Sci. 41: 879-885.
    • (2001) Crop Sci , vol.41 , pp. 879-885
    • Tai, P.Y.P.1    Miller, J.D.2
  • 32
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M and Kumar S (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599.
    • (2007) Mol. Biol. Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 33
    • 0037854629 scopus 로고    scopus 로고
    • Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.)
    • Thiel T, Michalek W, Varshney RK and Graner A (2003). Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.). Theor. Appl. Genet. 106: 411-422.
    • (2003) Theor. Appl. Genet , vol.106 , pp. 411-422
    • Thiel, T.1    Michalek, W.2    Varshney, R.K.3    Graner, A.4
  • 36
    • 4043130444 scopus 로고    scopus 로고
    • EST derived SSR markers for comparative mapping in wheat and rice
    • Yu JK, La RM, Kantety RV and Sorrells ME (2004). EST derived SSR markers for comparative mapping in wheat and rice. Mol. Genet. Genomics 271: 742-751.
    • (2004) Mol. Genet. Genomics , vol.271 , pp. 742-751
    • Yu, J.K.1    La, R.M.2    Kantety, R.V.3    Sorrells, M.E.4
  • 37
    • 77956128554 scopus 로고    scopus 로고
    • Analysis of the genetic diversity in Saccharum spontaneum L. accessions from Guangxi Province of China with RAPD-PCR
    • Zhang GM, Li YR, He WZ, He H, et al. (2010). Analysis of the genetic diversity in Saccharum spontaneum L. accessions from Guangxi Province of China with RAPD-PCR. Sugar Tech 12: 31-35.
    • (2010) Sugar Tech , vol.12 , pp. 31-35
    • Zhang, G.M.1    Li, Y.R.2    He, W.Z.3    He, H.4
  • 38
    • 84869381908 scopus 로고    scopus 로고
    • Pedigree analysis of genetic relationship among core parents of sugarcane in Mainland China
    • Zhang Q, Qi YW, Zhang CM, Chen YS, et al. (2009). Pedigree analysis of genetic relationship among core parents of sugarcane in Mainland China. Guangdong Agric. Sci. 10: 44-48.
    • (2009) Guangdong Agric. Sci , vol.10 , pp. 44-48
    • Zhang, Q.1    Qi, Y.W.2    Zhang, C.M.3    Chen, Y.S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.