메뉴 건너뛰기




Volumn 79, Issue 23, 2013, Pages 7445-7453

Novel gene clusters and metabolic Pathway involved in 3,5,6-trichloro-2-pyridinol degradation by Ralstonia sp. strain T6

Author keywords

[No Author keywords available]

Indexed keywords

3 ,5 ,6-TRICHLORO-2-PYRIDINOL; DEGENERATE PRIMERS; FLAVIN ADENINE DINUCLEOTIDE; INTERMEDIATE METABOLITES; INTERMEDIATE PRODUCT; MARINER TRANSPOSON; TRANSCRIPTIONAL REGULATOR; TRANSPOSON MUTAGENESIS;

EID: 84888236448     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.01817-13     Document Type: Article
Times cited : (20)

References (37)
  • 1
    • 24944469147 scopus 로고    scopus 로고
    • Isolation and characterization of a chlorpyrifos and 3,5,6-trichloro-2-pyridinol degrading bacterium
    • Yang L, Zhao Y, Zhang B, Yang C, Zhang X. 2005. Isolation and characterization of a chlorpyrifos and 3,5,6-trichloro-2-pyridinol degrading bacterium. FEMS Microbiol. Lett. 251:67-73.
    • (2005) FEMS Microbiol. Lett. , vol.251 , pp. 67-73
    • Yang, L.1    Zhao, Y.2    Zhang, B.3    Yang, C.4    Zhang, X.5
  • 2
    • 0018910912 scopus 로고
    • Persistence of chlorpyrifos in a mineral and an organic soil
    • Chapman RA, Harris CR. 1980. Persistence of chlorpyrifos in a mineral and an organic soil. J. Environ. Sci. Health B 15:39-46.
    • (1980) J. Environ. Sci. Health B , vol.15 , pp. 39-46
    • Chapman, R.A.1    Harris, C.R.2
  • 3
    • 0024163421 scopus 로고
    • Degradation of chlorpyrifos and its hydrolysis product, 3,5,6-trichloro-2-pyridinol, in soil
    • Racke KD, Coats JR, Titus KR. 1988. Degradation of chlorpyrifos and its hydrolysis product, 3,5,6-trichloro-2-pyridinol, in soil. J. Environ. Sci. Health B 23:527-539.
    • (1988) J. Environ. Sci. Health B , vol.23 , pp. 527-539
    • Racke, K.D.1    Coats, J.R.2    Titus, K.R.3
  • 4
    • 67349267291 scopus 로고    scopus 로고
    • Identification and characterization of chlorpyrifos-methyl and 3,5,6-trichloro-2-pyridinol degrading Burkholderia sp. strain KR100
    • Kim JR, Ahn YJ. 2009. Identification and characterization of chlorpyrifos-methyl and 3,5,6-trichloro-2-pyridinol degrading Burkholderia sp. strain KR100. Biodegradation 20:487-497.
    • (2009) Biodegradation , vol.20 , pp. 487-497
    • Kim, J.R.1    Ahn, Y.J.2
  • 5
    • 0034856513 scopus 로고    scopus 로고
    • Chlorothalonil and chlorpyrifos degradation products in golf course leachate
    • Armbrust KL. 2001. Chlorothalonil and chlorpyrifos degradation products in golf course leachate. Pest Manag. Sci. 57:797-802.
    • (2001) Pest Manag. Sci. , vol.57 , pp. 797-802
    • Armbrust, K.L.1
  • 6
    • 0002735088 scopus 로고
    • Factors affecting the degradation of 3,5,6-trichloro-2-pyridinol in soil
    • Racke KD, Robbins ST. 1991. Factors affecting the degradation of 3,5,6-trichloro-2-pyridinol in soil. ACS Symp. Ser. Am. Chem. Soc. 459:93-107.
    • (1991) ACS Symp. Ser. Am. Chem. Soc. , vol.459 , pp. 93-107
    • Racke, K.D.1    Robbins, S.T.2
  • 7
    • 0030765683 scopus 로고    scopus 로고
    • Isolation and characterization of a chlorinated-pyridinol-degrading bacterium
    • Feng Y, Racke KD, Bollag JM. 1997. Isolation and characterization of a chlorinated-pyridinol-degrading bacterium. Appl. Environ. Microbiol. 63:4096-4098.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 4096-4098
    • Feng, Y.1    Racke, K.D.2    Bollag, J.M.3
  • 9
    • 84863894686 scopus 로고    scopus 로고
    • DNA binding studies of 3,5,6-trichloro-2-pyridinol pesticide metabolite
    • Kashanian S, Shariati Z, Roshanfekr H, Ghobadi S. 2012. DNA binding studies of 3,5,6-trichloro-2-pyridinol pesticide metabolite. DNACell Biol. 31:1341-1348.
    • (2012) DNACell Biol , vol.31 , pp. 1341-1348
    • Kashanian, S.1    Shariati, Z.2    Roshanfekr, H.3    Ghobadi, S.4
  • 10
    • 44649085551 scopus 로고    scopus 로고
    • Biodegradation of chlorpyrifos and 3,5,6-trichloro-2-pyridinol by a newly isolated Paracoccus sp. strain TRP
    • Xu G, Zheng W, Li Y, Wang S, Zhang J, Yan Y. 2008. Biodegradation of chlorpyrifos and 3,5,6-trichloro-2-pyridinol by a newly isolated Paracoccus sp. strain TRP. Int. Biodeterior. Biodegradation 62:51-56.
    • (2008) Int. Biodeterior. Biodegradation , vol.62 , pp. 51-56
    • Xu, G.1    Zheng, W.2    Li, Y.3    Wang, S.4    Zhang, J.5    Yan, Y.6
  • 11
    • 80053964408 scopus 로고    scopus 로고
    • Kinetic analysis reveals bacterial efficacy for biodegradation of chlorpyrifos and its hydrolyzing metabolite TCP
    • Maya K, Singh RS, Upadhyay SN, Dubey SK. 2011. Kinetic analysis reveals bacterial efficacy for biodegradation of chlorpyrifos and its hydrolyzing metabolite TCP. Process Biochem. 46:2130-2136.
    • (2011) Process Biochem. , vol.46 , pp. 2130-2136
    • Maya, K.1    Singh, R.S.2    Upadhyay, S.N.3    Dubey, S.K.4
  • 12
    • 34548131688 scopus 로고    scopus 로고
    • Mineralization of chlorpyrifos by co-culture of Serratia and Trichosporon spp
    • Xu G, Li Y, Zheng W, Peng X, Li W, Yan Y. 2007. Mineralization of chlorpyrifos by co-culture of Serratia and Trichosporon spp. Biotechnol. Lett. 29:1469-1473.
    • (2007) Biotechnol. Lett. , vol.29 , pp. 1469-1473
    • Xu, G.1    Li, Y.2    Zheng, W.3    Peng, X.4    Li, W.5    Yan, Y.6
  • 13
    • 67349244678 scopus 로고    scopus 로고
    • Biodegradation of chlorpyrifos and its hydrolysis product 3,5,6-trichloro-2-pyridinol by Bacillus pumilus strain C2A1
    • Anwar S, Liaquat F, Khan QM, Khalid ZM, Iqbal S. 2009. Biodegradation of chlorpyrifos and its hydrolysis product 3,5,6-trichloro-2-pyridinol by Bacillus pumilus strain C2A1. J. Hazard. Mater. 168:400-405.
    • (2009) J. Hazard. Mater. , vol.168 , pp. 400-405
    • Anwar, S.1    Liaquat, F.2    Khan, Q.M.3    Khalid, Z.M.4    Iqbal, S.5
  • 14
    • 0031054647 scopus 로고    scopus 로고
    • Use of immobilized bacteria to treat industrial wastewater containing a chlorinated pyridinol
    • Feng Y, Racke KD, Bollag JM. 1997. Use of immobilized bacteria to treat industrial wastewater containing a chlorinated pyridinol. Appl. Microbiol. Biotechnol. 47:73-77.
    • (1997) Appl. Microbiol. Biotechnol. , vol.47 , pp. 73-77
    • Feng, Y.1    Racke, K.D.2    Bollag, J.M.3
  • 15
    • 77957734867 scopus 로고    scopus 로고
    • Isolation and characterization of 3, 5, 6-trichloro-2-pyridinol-degrading Ralstonia sp. strain T6
    • Li J, Liu J, Shen W, Zhao X, Hou Y, Cao H, Cui Z. 2010. Isolation and characterization of 3, 5, 6-trichloro-2-pyridinol-degrading Ralstonia sp. strain T6. Bioresour. Technol. 101:7479-7483.
    • (2010) Bioresour. Technol. , vol.101 , pp. 7479-7483
    • Li, J.1    Liu, J.2    Shen, W.3    Zhao, X.4    Hou, Y.5    Cao, H.6    Cui, Z.7
  • 18
    • 0031900618 scopus 로고    scopus 로고
    • Photolytic and microbial degradation of 3,5,6-trichloro-2-pyridinol
    • Feng Y, Minard RD, Bollag JM. 1998. Photolytic and microbial degradation of 3,5,6-trichloro-2-pyridinol. Environ. Toxicol. Chem. 17:814-819.
    • (1998) Environ. Toxicol. Chem. , vol.17 , pp. 814-819
    • Feng, Y.1    Minard, R.D.2    Bollag, J.M.3
  • 19
    • 0036279656 scopus 로고    scopus 로고
    • Genetic and biochemical characterization of a 2,4,6-trichlorophenol degradation pathway in Ralstonia eutropha JMP134
    • Louie TM, Webster CM, Xun L. 2002. Genetic and biochemical characterization of a 2,4,6-trichlorophenol degradation pathway in Ralstonia eutropha JMP134. J. Bacteriol. 184:3492-3500.
    • (2002) J. Bacteriol. , vol.184 , pp. 3492-3500
    • Louie, T.M.1    Webster, C.M.2    Xun, L.3
  • 20
    • 34547780597 scopus 로고    scopus 로고
    • Self-formed adaptor PCR: a simple and efficient method for chromosome walking
    • Wang S, He J, Cui Z, Li S. 2007. Self-formed adaptor PCR: a simple and efficient method for chromosome walking. Appl. Environ. Microbiol. 73: 5048-5051.
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 5048-5051
    • Wang, S.1    He, J.2    Cui, Z.3    Li, S.4
  • 21
    • 0024284028 scopus 로고
    • A simple salting out procedure for extracting DNA from human nucleated cells
    • Miller SA, Dykes DD, Polesky HF. 1988. A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res. 16: 1215.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 1215
    • Miller, S.A.1    Dykes, D.D.2    Polesky, H.F.3
  • 22
    • 0027158657 scopus 로고
    • Versatile suicide vectors which allow direct selection for gene replacement in Gram-negative bacteria
    • Quandt J, Hynes MF. 1993. Versatile suicide vectors which allow direct selection for gene replacement in Gram-negative bacteria. Gene 127:15-21.
    • (1993) Gene , vol.127 , pp. 15-21
    • Quandt, J.1    Hynes, M.F.2
  • 23
    • 0028793123 scopus 로고
    • Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes
    • Kovach ME, Elzer PH, Hill DS, Robertson GT, Farris MA, Roop RM, II, Peterson KM. 1995. Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. Gene 166:175-176.
    • (1995) Gene , vol.166 , pp. 175-176
    • Kovach, M.E.1    Elzer, P.H.2    Hill, D.S.3    Robertson, G.T.4    Farris, M.A.5    Roop II, R.M.6    Peterson, K.M.7
  • 24
  • 25
    • 0033791981 scopus 로고    scopus 로고
    • Construction of a Vibrio cholerae vaccine candidate using transposon delivery and FLP recombinase-mediated excision
    • Chiang SL, Mekalanos JJ. 2000. Construction of a Vibrio cholerae vaccine candidate using transposon delivery and FLP recombinase-mediated excision. Infect. Immun. 68:6391-6397.
    • (2000) Infect. Immun. , vol.68 , pp. 6391-6397
    • Chiang, S.L.1    Mekalanos, J.J.2
  • 26
    • 82355186132 scopus 로고    scopus 로고
    • A sirA-like gene, sirA2, is essential for 3-succinoyl-pyridine metabolism in the newly isolated nicotine-degrading Pseudomonas sp. HZN6 strain
    • Qiu J, Ma Y, Chen L, Wu L, Wen Y, Liu W. 2011. A sirA-like gene, sirA2, is essential for 3-succinoyl-pyridine metabolism in the newly isolated nicotine-degrading Pseudomonas sp. HZN6 strain. Appl. Microbiol. Biotechnol. 92:1023-1032.
    • (2011) Appl. Microbiol. Biotechnol. , vol.92 , pp. 1023-1032
    • Qiu, J.1    Ma, Y.2    Chen, L.3    Wu, L.4    Wen, Y.5    Liu, W.6
  • 27
    • 0028949381 scopus 로고
    • Thermal asymmetric interlaced PCR: automatable amplification and sequencing of insert end fragments from Pl and YAC clones for chromosome walking
    • Liu YG, Whittier RF. 1995. Thermal asymmetric interlaced PCR: automatable amplification and sequencing of insert end fragments from Pl and YAC clones for chromosome walking. Genomics 25:674-681.
    • (1995) Genomics , vol.25 , pp. 674-681
    • Liu, Y.G.1    Whittier, R.F.2
  • 28
    • 0014195281 scopus 로고
    • Molecular weight estimation of polypeptide chains by electrophoresis in SDS-polyacrylamide gels
    • Shapiro AL, Viñuela E, Maizel JV. 1967. Molecular weight estimation of polypeptide chains by electrophoresis in SDS-polyacrylamide gels. Biochem. Biophys. Res. Commun. 28:815-820.
    • (1967) Biochem. Biophys. Res. Commun. , vol.28 , pp. 815-820
    • Shapiro, A.L.1    Viñuela, E.2    Maizel, J.V.3
  • 29
    • 0343503015 scopus 로고    scopus 로고
    • Developmental toxicity studies in rats and rabbits with 3,5,6-trichloro-2-pyridinol, the major metabolite of chlorpyrifos
    • Hanley TR, Carney EW, Johnson EW. 2000. Developmental toxicity studies in rats and rabbits with 3,5,6-trichloro-2-pyridinol, the major metabolite of chlorpyrifos. Toxicol. Sci. 53:100-108.
    • (2000) Toxicol. Sci. , vol.53 , pp. 100-108
    • Hanley, T.R.1    Carney, E.W.2    Johnson, E.W.3
  • 30
    • 0042067877 scopus 로고    scopus 로고
    • Contrasting behaviour of chlorpyrifos and its primary metabolite, TCP (3,5,6-trichloro-2-pyridinol), with depth in soil profiles
    • Baskaran S, Kookana RS, Naidu R. 2003. Contrasting behaviour of chlorpyrifos and its primary metabolite, TCP (3,5,6-trichloro-2-pyridinol), with depth in soil profiles. Aust. J. Soil Res. 41:749-760.
    • (2003) Aust. J. Soil Res. , vol.41 , pp. 749-760
    • Baskaran, S.1    Kookana, R.S.2    Naidu, R.3
  • 31
    • 33847216208 scopus 로고    scopus 로고
    • Field incurred chlorpyrifos and 3,5,6-trichloro-2-pyridinol residues in fresh and processed vegetables
    • Randhawa MA, Anjum FM, Ahmed A, Randhawa MS. 2007. Field incurred chlorpyrifos and 3,5,6-trichloro-2-pyridinol residues in fresh and processed vegetables. Food Chem. 103:1016-1023.
    • (2007) Food Chem. , vol.103 , pp. 1016-1023
    • Randhawa, M.A.1    Anjum, F.M.2    Ahmed, A.3    Randhawa, M.S.4
  • 32
    • 35349008497 scopus 로고    scopus 로고
    • Toxicity of chlorpyrifos and TCP alone and in combination to Daphnia carinata: the influence of microbial degradation in natural water
    • Cáceres T, He W, Naidu R, Megharaj M. 2007. Toxicity of chlorpyrifos and TCP alone and in combination to Daphnia carinata: the influence of microbial degradation in natural water. Water Res. 41:4497-4503.
    • (2007) Water Res. , vol.41 , pp. 4497-4503
    • Cáceres, T.1    He, W.2    Naidu, R.3    Megharaj, M.4
  • 33
    • 78649316558 scopus 로고    scopus 로고
    • The effects of washing and cooking on chlorpyrifos and its toxic metabolites in vegetables
    • Ling Y, Wang H, Yong W, Zhang F, Sun L, Yang M, Wu Y, Chu X. 2011. The effects of washing and cooking on chlorpyrifos and its toxic metabolites in vegetables. Food Control 22:54-58.
    • (2011) Food Control , vol.22 , pp. 54-58
    • Ling, Y.1    Wang, H.2    Yong, W.3    Zhang, F.4    Sun, L.5    Yang, M.6    Wu, Y.7    Chu, X.8
  • 34
    • 34248156140 scopus 로고    scopus 로고
    • Genetic characterization of 2,4,6-trichlorophenol degradation in Cupriavidus necator JMP134
    • Sánchez MA, González B. 2007. Genetic characterization of 2,4,6-trichlorophenol degradation in Cupriavidus necator JMP134. Appl. Environ. Microbiol. 73:2769-2776.
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 2769-2776
    • Sánchez, M.A.1    González, B.2
  • 35
    • 2142689713 scopus 로고    scopus 로고
    • Efficient degradation of 2,4,6-trichlorophenol requires a set of catabolic genes related to tcp genes from Ralstonia eutropha JMP134(pJP4)
    • Matus V, Sánchez MA, Martínez M, González B. 2003. Efficient degradation of 2,4,6-trichlorophenol requires a set of catabolic genes related to tcp genes from Ralstonia eutropha JMP134(pJP4). Appl. Environ. Microbiol. 69:7108-7115.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 7108-7115
    • Matus, V.1    Sánchez, M.A.2    Martínez, M.3    González, B.4
  • 36
    • 1342304117 scopus 로고    scopus 로고
    • A monooxygenase catalyzes sequential dechlorinations of 2,4,6-trichlorophenol by oxidative and hydrolytic reactions
    • Xun L, Webster CM. 2004. A monooxygenase catalyzes sequential dechlorinations of 2,4,6-trichlorophenol by oxidative and hydrolytic reactions. J. Biol. Chem. 279:6696-6700.
    • (2004) J. Biol. Chem. , vol.279 , pp. 6696-6700
    • Xun, L.1    Webster, C.M.2
  • 37
    • 0029811543 scopus 로고    scopus 로고
    • Microbial metabolism of pyridine, quinoline, acridine, and their derivatives under aerobic and anaerobic conditions
    • Kaiser JP, Feng Y, Bollag JM. 1996. Microbial metabolism of pyridine, quinoline, acridine, and their derivatives under aerobic and anaerobic conditions. Microbiol. Rev. 60:483-498.
    • (1996) Microbiol. Rev. , vol.60 , pp. 483-498
    • Kaiser, J.P.1    Feng, Y.2    Bollag, J.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.