Root protein profiles of two citrus rootstocks grown under iron sufficiency/deficiency conditions

European Journal of Mass Spectrometry

Volumn 19, Issue 4, 2013, Pages 305-324

  Muccilli, Vera ^a   Licciardello, Concetta ^b   Fontanini, Debora ^c   Cunsolo, Vincenzo ^a   Capocchi, Antonella ^c   Saletti, Rosaria ^a   Torrisi, Biagio ^b   Foti, Salvatore ^a  

^a UNIVERSITY OF CATANIA   (Italy)

^b ISTITUTO NAZIONALE DELLA NUTRIZIONE   (Italy)

^c UNIVERSITY OF PISA   (Italy)

Author keywords

Chlorosis; Citrus; HPLC nESI MS MS; Proteomics; Roots

Indexed keywords

ELECTROPHORESIS; ELECTROSPRAY IONIZATION; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; IRON; LIME; MASS SPECTROMETRY; MOLECULAR BIOLOGY; PRINCIPAL COMPONENT ANALYSIS; SOILS;

CHLOROSIS; CITRUS; HPLC-NESI-MS/MS; PROTEOMICS; ROOTS;

PROTEINS;

IRON; VEGETABLE PROTEIN;

ARTICLE; CHEMISTRY; CITRUS; ELECTROSPRAY MASS SPECTROMETRY; GROWTH, DEVELOPMENT AND AGING; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; METABOLISM; PLANT ROOT; PROTEOMICS; TANDEM MASS SPECTROMETRY; TWO DIMENSIONAL GEL ELECTROPHORESIS;

CHROMATOGRAPHY, HIGH PRESSURE LIQUID; CITRUS; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; IRON; PLANT PROTEINS; PLANT ROOTS; PROTEOMICS; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; TANDEM MASS SPECTROMETRY;

EID: 84887960351     PISSN: None     EISSN: 17516838     Source Type: Journal    
DOI: 10.1255/ejms.1230     Document Type: Article

References (39)

1. H. Marschner, Mineral Nutrition of Higher Plants. Academic Press, London, UK (1986). doi:10.1002/jpln.19871500520
2. H.V. Marsh, H.J. Evans and G. Matrone, "Investigations of the role of iron in chlorophyll metabolism 1. Effect of iron deficiency on chlorophyll and heme content and on the activities of certain enzymes in leaves", Plant Physiol. 38(6), 638 (1963). doi:10.1104/pp.38.6.638
3. H. Marschner, V. Romheld and M. Kissel, "Different strategies in higher plants in mobilization and uptake of iron", J. Plant Nutr. 9(3-7), 3 (1986). doi:10.1080/01904168609363475
4. V. Römheld and H. Marschner, "Evidence for a specific uptake system for iron phytosiderophores in roots of grasses", Plant Physiol. 80(1), 175 (1986). doi:10.1104/pp.80.1.17 5
5. B. Jaegger, H. Goldbach and K. Sommer, "Release from lime induced iron chlorosis by CULTAN in fruit trees and its characterisation by analysis", Acta Hort. 531, 107 (2000).
6. M.A. Forner-Giner, M.J. Llosá, J.L. Carrasco, M.A. Perez-Amador, L. Navarro and G. Ancillo, "Differential gene expression analysis provides new insights into the molecular basis of iron deficiency stress response in the citrus rootstock Poncirus trifoliata (L.) Raf", J. Exp. Bot. 61(2), 483 (2010). doi:10.1093/jxb/erp328
7. th International Symposium, Kluwer Academic Publisher, Dordrecht, The Netherlands, p 147 (1995). doi:10.1007/978-94-011-0503-3-21
8. M. Hamzé, J. Ryan and M. Zaabout, "Screening of citrus rootstocks for lime-induced chlorosis tolerance", J. Plant Nutr. 9, 459 (1986). doi:10.1080/01904168609363459
9. H.K. Wutscher, "Citrus rootstocks", in Horticultural Reviews, Volume 1, Ed by J. Janick. AVI Publishing, Westport, CT, USA, p. 237 (1979).
10. V.D. Jolley, K.A. Cook, N.C. Hansen and W.B. Steven, "Plant physiological responses for genotypic evaluation of iron efficiency in strategy I and strategy II plants: a review", J. Plant Nutr. 19, 1241 (1996). doi:10.1080/01904169609365195
11. V. Muccilli, C. Licciardello, D. Fontanini, M.P. Russo, V. Cunsolo, R. Saletti, G. Reforgiato Recupero and S. Foti, "Proteome analysis of Citrus sinensis L. (Osbeck) flesh at ripening time", J. Proteomics. 73(1), 134 (2009). doi:10.1016/j.jprot.2009.09.005
12. M. Pestana, A. de Varennes, A. Javier and E.A. Faria, "Differential tolerance to iron deficiency of Citrus rootstocks grown in nutrient solution", Sci. Hort. 104, 25 (2005). doi: 10.1016/j.scienta.2004.07.007
13. T. Isaacson, B. Damasceno, R.S. Saravanan, Y. He, C. Catalá, M. Saladié and J.K.C. Rose, "Sample extraction techniques for enhanced proteomic analysis of plant tissues", Nat. Protoc. 1(2), 769 (2006). doi:10.1038/nprot.2006.102
14. U.K. Laemmli, "Cleavage of structural proteins during the assembly of the head of batteriophage T4", Nature 227(5259), 680 (1970). doi:10.1038/227680a0
15. M. Shevchenko, M. Wilm, O. Vorm and M. Mann, "Mass spectrometric sequencing of proteins from silver-stained polyacrylamide gels", Anal. Chem. 68(5), 850 (1996). doi:10.1021/ac950914h
16. The Gene Ontology www.geneontology.org/.
17. S. Tsukuda, K. Gomi, H. Yamamoto and K. Akimitsu, "Characterization of cDNAs encoding two distinct miraculin-like proteins and stress-related modulation of the corresponding mRNAs in Citrus jambhiri lush", Plant Mol. Biol. 60(1), 125 (2006). doi:10.1007/s11103-005-2941-4
18. J. Fan, C. Chen, Q. Yu, R.H. Brlansky, Z.G. Li and F.G. Gmitter, Jr, 'Comparative iTRAQ proteome and transcriptome analyses of sweet orange infected by "Candidatus Liberibacter asiaticus"', Physiol. Plant. 143(3), 235 (2011). doi:10.1111/j.1399-3054.2011.01502.x
19. T. Brumbarova, A. Matros, H.P. Mock and P. Bauer, "A proteomic study showing differential regulation of stress, redox regulation and peroxidase proteins by iron supply and the transcription factor FER", Plant J. 54(2), 321 (2008). doi:10.1111/j.1365-313X.2008.03421.x
20. J. Li, X.D. Wu, S.T. Hao, X.J. Wang and H.Q. Ling, "Proteomic response to iron deficiency in tomato root", Proteomics 8 (11), 2299 (2008). doi:10.1002/pmic.200700942
21. R. Rellán-Álvarez, S. Andaluz, J. Rodríguez-Celma, G. Wohlgemuth and G. Zocchi, R. Rellán-Alvarez, S. Andaluz, J. Rodríguez-Celma, G. Wohlgemuth, G. Zocchi, A. Alvarez-Fernández, O. Fiehn, A.F. López-Millán and J. Abadía, A. Álvarez-Fernández, O. Fiehn, A.F. López-Millán and J. Abadía, "Changes in the proteomic and metabolic profiles of Beta vulgaris root tips in response to iron deficiency and resupply", BMC Plant Biol. 10, 120 (2010). doi:10.1186/1471-2229-10-120
22. S. Donnini, B. Prinsi, A.S. Negri, G. Vigani, L. Espen and G. Zocchi, "Proteomic characterization of iron deficiency responses in Cucumis sativus L. roots", BMC Plant Biol. 10, 268 (2010). doi:10.1186/1471-2229-10-268
23. A. Zamboni, L. Zanin, N. Tomasi, M. Pezzotti, R. Pinton, Z. Varanini and S. Cesco, "Genome-wide microarray analysis of tomato roots showed defined responses to iron deficiency", BMC Genomics 13, 101 (2012). doi:10.1186/1471-2164-13-101
24. T. Kobayashi, N.K. Nishizawa and S. Mori in: Iron Nutrition in Plants and Rhizosperic Microorganism, Ed by L.L. Barton and J. Abadia. Springer Verlag, Dordrecht, The Netherlands, p. 395 (2007).
25. V.R. Nenova and I.G. Stoyanov, "Effects of some growth regulators on young iron deficient maize plants", Plant Biol. 43(1), 35 (2000). doi: 10.1023/A:1026542727558
26. M.S. Almansa, J.A. Hernandez, A. Jimenez, M.A. Botella and F. Sevilla, "Effects of salt stress on superoxide dismutase activity in leaves of Citrus limonum in different rootstock-scion combinations", Plant Biol. 45(4), 545 (2002). doi: 10.1023/A:1022373025148
27. A. Ranieri, A. Castagna, B. Baldan and G.F. Soldatini, "Iron deficiency differently affects peroxidase isoforms in sunflower", J. Exp. Bot. 52(354), 25 (2001). doi:10.1093/jexbot/52.354.25
28. J. Rodríguez-Celma, G. Lattanzio, M.A. Grusak, A. Abadía, J. Abadía and A.F. López-Millán, "Root responses of Medicago truncatula plants grown in two different iron deficiency conditions: changes in root protein profle and riboflavin biosynthesis", J. Proteome Res. 10(5), 2590 (2011). doi:10.1021/pr2000623
29. G. Vigani and G. Zocchi, "The fate and the role of mitochondria in Fe-deficient roots of strategy I plants", Plant Signal. Behav. 4(5), 375 (2009). doi:10.1016/j.jplph.2009.12.006
30. G. Rabotti, P. De Nisi and G. Zocchi, "Metabolic implications in the biochemical responses to iron deficiency in cucumber (Cucucmis sativus L.) roots", Plant Physiol. 107(4), 1195 (1995). doi:10.1104/pp.107.4.1195
31. L. Espen, M. Dell'Orto, P. De Nisi and G. Zocchi, "Metabolic responses in cucumber (Cucumis sativus L.) roots under Fe-deficiency: a 31P-nuclear magnetic resonance in vivo study", Planta 210(6), 985 (2000). doi:10.1007/s004250050707
32. S. Mori, "Iron acquisition by plants", Curr. Opin. Plant Biol. 2(3), 250 (1999). doi:10.1016/S1369-5266(99)80043-0
33. B.M. Waters, C. Lucena, F.J. Romera, G.G. Jester, A.N. Wynn, C.L. Rojas, E. Alcántara and R. Pérez-Vicente, "Ethylene involvement in the regulation of H+-ATPase CsHA1 gene and of the new isolated ferric reductase CsFRO1 and iron transporter CsIRT1 genes in cucumber plants", Plant Physiol. Biochem. 45(5), 293 (2007). doi:10.1016/j.plaphy.2007.03.011
34. A.M. Timperio, M.G. Egidi and L. Zolla, "Proteomics applied on plant abiotic stresses: role of heat shock proteins (HSP)", J. Proteomics 71(4), 391 (2008). doi:10.1016/j.jprot.2008.07.005
35. W. Wang, B. Vinocur, O. Shoseyov and A. Altman, "Role of plant heat-shock proteins and molecular chaperones in the abiotic stress response", Trends Plant Sci. 9(5), 1360 (2004). doi:10.1016/j.tplants.2004. 03.006
36. M.B. Bogeat-Triboulot, M. Brosché, J. Renaut, L. Jouve, D. Le Thiec, P. Fayyaz, B. Vinocur, E. Witters, K. Laukens, T. Teichmann, A. Altman, J.F. Hausman, A. Polle, J. Kangasjärvi and E. Dreyer, "Gradual soil water depletion results in reversible changes of gene expression, protein profiles, ecophysiology and growth performance in Populus euphratica, a poplar growing in arid regions", Plant Physiol. 143(2), 876 (2007). doi:10.1104/pp.106.088708
37. K. Kosová, P. Vítámvás, I.T. Prášil and J. Renaut, "Plant proteome changes under abiotic stress-contribution of proteomics studies to understanding plant stress response", J. Proteomics 74(8), 1301 (2011). doi:10.1016/j.jprot.2011.02. 006
38. M. Leterrier, J.B. Barroso, R. Valderrama, J.M. Palma and F.J. Corpas, "NADP-dependent isocitrate dehydrogenase from arabidopsis roots contributes in the mechanism of defence against the nitro-oxidative stress induced by salinity", Scientific World Journal, Article ID 694740 (2012). doi:10.1100/2012/694740
39. M. Leterrier, J.B. Barroso, J.M. Palma and F.J. Corpas, "Cytosolic NADP-isocitrate dehydrogenase in Arabidopsis leaves and roots", Biol. Plant. 56(4), 705 (2012). doi:10.1007/s10535-012-0244-6