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Volumn 41, Issue 6, 2013, Pages 1464-1467

The Cmr complex: An RNA-guided endoribonuclease

Author keywords

Clustered regularly interspaced short palindromic repeats (CRISPR); Cmr; Metal ion; Nuclease; Repeatassociated mysterious protein (RAMP); RNA interference

Indexed keywords

ARCHAEAL PROTEIN; CELLULAR APOPTOSIS SUSCEPTIBILITY PROTEIN; CMR PROTEIN COMPLEX; COMPLEMENTARY RNA; GUIDE RNA; HISTIDINE; MULTIPROTEIN COMPLEX; RIBONUCLEASE; RIBONUCLEOPROTEIN; UNCLASSIFIED DRUG;

EID: 84887864796     PISSN: 03005127     EISSN: 14708752     Source Type: Journal    
DOI: 10.1042/BST20130216     Document Type: Conference Paper
Times cited : (5)

References (26)
  • 4
    • 34248374277 scopus 로고    scopus 로고
    • A putative RNA-interference-based immune system in prokaryotes: Computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action
    • Makarova, K.S., Grishin, N.V., Shabalina, S.A., Wolf, Y.I. and Koonin, E.V. (2006) A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol. Direct 1, 7
    • (2006) Biol. Direct , vol.1 , pp. 7
    • Makarova, K.S.1    Grishin, N.V.2    Shabalina, S.A.3    Wolf, Y.I.4    Koonin, E.V.5
  • 5
    • 57849137502 scopus 로고    scopus 로고
    • CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA
    • Marraffini, L.A. and Sontheimer, E.J. (2008) CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA. Science 322, 1843-1845
    • (2008) Science , vol.322 , pp. 1843-1845
    • Marraffini, L.A.1    Sontheimer, E.J.2
  • 6
    • 84863371175 scopus 로고    scopus 로고
    • The mysterious RAMP proteins and their roles in small RNA-based immunity
    • Wang, R. and Li, H. (2012) The mysterious RAMP proteins and their roles in small RNA-based immunity. Protein Sci. 21, 463-470
    • (2012) Protein Sci. , vol.21 , pp. 463-470
    • Wang, R.1    Li, H.2
  • 10
    • 57049149666 scopus 로고    scopus 로고
    • Prokaryotic silencing (psi)RNAs in Pyrococcus furiosus
    • Hale, C., Kleppe, K., Terns, R.M. and Terns, M.P. (2008) Prokaryotic silencing (psi)RNAs in Pyrococcus furiosus. RNA 14, 2572-2579
    • (2008) RNA , vol.14 , pp. 2572-2579
    • Hale, C.1    Kleppe, K.2    Terns, R.M.3    Terns, M.P.4
  • 11
    • 84855475577 scopus 로고    scopus 로고
    • Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing site
    • Hatoum-Aslan, A., Maniv, I. and Marraffini, L.A. (2011) Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing site. Proc. Natl. Acad. Sci. U.S.A. 108, 21218-21222
    • (2011) Proc. Natl. Acad. Sci. U.S.A. , vol.108 , pp. 21218-21222
    • Hatoum-Aslan, A.1    Maniv, I.2    Marraffini, L.A.3
  • 12
    • 79960554003 scopus 로고    scopus 로고
    • Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems
    • Makarova, K.S., Aravind, L., Wolf, Y.I. and Koonin, E.V. (2011) Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems. Biol. Direct 6, 38
    • (2011) Biol. Direct , vol.6 , pp. 38
    • Makarova, K.S.1    Aravind, L.2    Wolf, Y.I.3    Koonin, E.V.4
  • 13
    • 84859294085 scopus 로고    scopus 로고
    • Modulation of CRISPR locus transcription by the repeat-binding protein Cbp1 in Sulfolobus
    • Deng, L., Kenchappa, C.S., Peng, X., She, Q. and Garrett, R.A. (2012) Modulation of CRISPR locus transcription by the repeat-binding protein Cbp1 in Sulfolobus. Nucleic Acids Res. 40, 2470-2480
    • (2012) Nucleic Acids Res. , vol.40 , pp. 2470-2480
    • Deng, L.1    Kenchappa, C.S.2    Peng, X.3    She, Q.4    Garrett, R.A.5
  • 15
    • 33748096466 scopus 로고    scopus 로고
    • A putative viral defence mechanism in archaeal cells
    • Lillestøl, R.K., Redder, P., Garrett, R.A. and Brügger, K. (2006) A putative viral defence mechanism in archaeal cells. Archaea 2, 59-72
    • (2006) Archaea , vol.2 , pp. 59-72
    • Lillestøl, R.K.1    Redder, P.2    Garrett, R.A.3    Brügger, K.4
  • 16
    • 84861313038 scopus 로고    scopus 로고
    • Identification of novel positive-strand RNA viruses by metagenomic analysis of archaea-dominated Yellowstone hot springs
    • Bolduc, B., Shaughnessy, D.P., Wolf, Y.I., Koonin, E.V., Roberto, F.F. and Young, M. (2012) Identification of novel positive-strand RNA viruses by metagenomic analysis of archaea-dominated Yellowstone hot springs. J. Virol. 86, 5562-5573
    • (2012) J. Virol. , vol.86 , pp. 5562-5573
    • Bolduc, B.1    Shaughnessy, D.P.2    Wolf, Y.I.3    Koonin, E.V.4    Roberto, F.F.5    Young, M.6
  • 17
    • 84874195392 scopus 로고    scopus 로고
    • A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus
    • Deng, L., Garrett, R.A., Shah, S.A., Peng, X. and She, Q. (2013) A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus. Mol. Microbiol. 87, 1088-1099
    • (2013) Mol. Microbiol. , vol.87 , pp. 1088-1099
    • Deng, L.1    Garrett, R.A.2    Shah, S.A.3    Peng, X.4    She, Q.5
  • 18
    • 84879584456 scopus 로고    scopus 로고
    • CRISPR interference: A structural perspective
    • Reeks, J., Naismith, J.H. and White, M.F. (2013) CRISPR interference: a structural perspective. Biochem. J. 453, 155-166
    • (2013) Biochem. J. , vol.453 , pp. 155-166
    • Reeks, J.1    Naismith, J.H.2    White, M.F.3
  • 20
    • 84862822911 scopus 로고    scopus 로고
    • Crystal structure of Cmr2 suggests a nucleotide cyclase-related enzyme in type III CRISPR-Cas systems
    • Zhu, X. and Ye, K. (2012) Crystal structure of Cmr2 suggests a nucleotide cyclase-related enzyme in type III CRISPR-Cas systems. FEBS Lett. 586, 939-945
    • (2012) FEBS Lett. , vol.586 , pp. 939-945
    • Zhu, X.1    Ye, K.2
  • 21
    • 84874936854 scopus 로고    scopus 로고
    • Structure of the Cmr2-Cmr3 subcomplex of the Cmr RNA silencing complex
    • Shao, Y., Cocozaki, A.I., Ramia, N.F., Terns, R.M., Terns, M.P. and Li, H. (2013) Structure of the Cmr2-Cmr3 subcomplex of the Cmr RNA silencing complex. Structure 21, 376-384
    • (2013) Structure , vol.21 , pp. 376-384
    • Shao, Y.1    Cocozaki, A.I.2    Ramia, N.F.3    Terns, R.M.4    Terns, M.P.5    Li, H.6
  • 22
    • 66149108791 scopus 로고    scopus 로고
    • X-ray crystal structure of a CRISPR-associated RAMP superfamily protein, Cmr5, from Thermus thermophilus HB8
    • Sakamoto, K., Agari, Y., Agari, K., Yokoyama, S., Kuramitsu, S. and Shinkai, A. (2009) X-ray crystal structure of a CRISPR-associated RAMP superfamily protein, Cmr5, from Thermus thermophilus HB8. Proteins 75, 528-532
    • (2009) Proteins , vol.75 , pp. 528-532
    • Sakamoto, K.1    Agari, Y.2    Agari, K.3    Yokoyama, S.4    Kuramitsu, S.5    Shinkai, A.6
  • 23
    • 0033581011 scopus 로고    scopus 로고
    • DNA polymerases: Structural diversity and common mechanisms
    • Steitz, T.A. (1999) DNA polymerases: structural diversity and common mechanisms. J. Biol. Chem. 274, 17395-17398
    • (1999) J. Biol. Chem. , vol.274 , pp. 17395-17398
    • Steitz, T.A.1
  • 24
    • 80052400382 scopus 로고    scopus 로고
    • Structural and biochemical analysis of nuclease domain of clustered regularly interspaced short palindromic repeat (CRISPR)-associated protein 3 (Cas3)
    • Mulepati, S. and Bailey, S. (2011) Structural and biochemical analysis of nuclease domain of clustered regularly interspaced short palindromic repeat (CRISPR)-associated protein 3 (Cas3). J. Biol. Chem. 286, 31896-31903
    • (2011) J. Biol. Chem. , vol.286 , pp. 31896-31903
    • Mulepati, S.1    Bailey, S.2
  • 25
    • 79953779608 scopus 로고    scopus 로고
    • Cas3 is a single-stranded DNA nuclease and ATP-dependent helicase in the CRISPR/Cas immune system
    • Sinkunas, T., Gasiunas, G., Fremaux, C., Barrangou, R., Horvath, P. and Siksnys, V. (2011) Cas3 is a single-stranded DNA nuclease and ATP-dependent helicase in the CRISPR/Cas immune system. EMBO J. 30, 1335-1342
    • (2011) EMBO J. , vol.30 , pp. 1335-1342
    • Sinkunas, T.1    Gasiunas, G.2    Fremaux, C.3    Barrangou, R.4    Horvath, P.5    Siksnys, V.6
  • 26
    • 81255160844 scopus 로고    scopus 로고
    • Structure and activity of the Cas3 HD nuclease MJ0384, an effector enzyme of the CRISPR interference
    • Beloglazova, N., Petit, P., Flick, R., Brown, G., Savchenko, A. and Yakunin, A.F. (2011) Structure and activity of the Cas3 HD nuclease MJ0384, an effector enzyme of the CRISPR interference. EMBO J. 30, 4616-4627
    • (2011) EMBO J. , vol.30 , pp. 4616-4627
    • Beloglazova, N.1    Petit, P.2    Flick, R.3    Brown, G.4    Savchenko, A.5    Yakunin, A.F.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.