Functional characterization of a plastid-specific ribosomal protein PSRP2 in Arabidopsis thaliana under abiotic stress conditions

Plant Physiology and Biochemistry

Volumn 73, Issue , 2013, Pages 405-411

  Xu, Tao ^a   Lee, Kwanuk ^a   Gu, Lili ^a   Kim, Jeong Il ^a   Kang, Hunseung ^a  

^a Chonnam National University   (South Korea)

Author keywords

Abiotic stress; Arabidopsis thaliana; Plastic specific ribosomal protein; Ribosome function; RNA binding protein

Indexed keywords

ARABIDOPSIS PROTEIN; BACTERIAL DNA; CHAPERONE; PSRP2 PROTEIN, ARABIDOPSIS; RIBOSOME PROTEIN; RNA BINDING PROTEIN; SODIUM CHLORIDE; T DNA; T-DNA; WATER;

ABIOTIC STRESS; ADAPTATION; ARABIDOPSIS; ARABIDOPSIS THALIANA; ARTICLE; CHEMISTRY; CHLOROPLAST; COLD; DEHYDRATION; DROUGHT; GENE EXPRESSION REGULATION; GENETICS; GENOTYPE; GERMINATION; GROWTH, DEVELOPMENT AND AGING; LIGHT; METABOLISM; PHYSIOLOGICAL STRESS; PLANT GENE; PLASTIC-SPECIFIC RIBOSOMAL PROTEIN; PLASTID-SPECIFIC RIBOSOMAL PROTEIN; PSRP; RBP; RIBOSOME FUNCTION; RNA-BINDING PROTEIN; RNA-RECOGNITION MOTIF; RRM; SALT TOLERANCE; SEEDLING; TRANSGENIC PLANT;

ABIOTIC STRESS; ARABIDOPSIS THALIANA; PLASTIC-SPECIFIC RIBOSOMAL PROTEIN; PLASTID-SPECIFIC RIBOSOMAL PROTEIN; PSRP; RBP; RIBOSOME FUNCTION; RNA-BINDING PROTEIN; RNA-RECOGNITION MOTIF; RRM;

ADAPTATION, PHYSIOLOGICAL; ARABIDOPSIS; ARABIDOPSIS PROTEINS; CHLOROPLASTS; COLD TEMPERATURE; DEHYDRATION; DNA, BACTERIAL; DROUGHTS; GENES, PLANT; GENOTYPE; GERMINATION; LIGHT; MOLECULAR CHAPERONES; MUTAGENESIS, INSERTIONAL; PLANTS, GENETICALLY MODIFIED; RIBOSOMAL PROTEINS; RNA-BINDING PROTEINS; SALT-TOLERANCE; SEEDLING; SODIUM CHLORIDE; STRESS, PHYSIOLOGICAL; WATER;

EID: 84887556795     PISSN: 09819428     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plaphy.2013.10.027     Document Type: Article

References (29)

1. Marin-Navarro J., Manuell A.L., Wu J., Mayfield S.P. Chloroplast translation regulation. Photosynth. Res. 2007, 94:359-374.
2. de Longevialle A.F., Small I.D., Lurin C. Nuclearly encoded splicing factors implicated in RNA splicing in higher plant organelles. Mol. Plant 2010, 3:691-705.
3. Stern D.B., Goldschmidt-Clermont M., Hanson M.R. Chloroplast RNA metabolism. Annu. Rev. Plant Biol. 2010, 61:125-155.
4. Barkan A. Expression of plastid genes: organelle-specific elaborations on a prokaryotic scaffold. Plant Physiol. 2011, 155:1520-1532.
5. Yamaguchi K., von Knoblauch K., Subramanian A.R. The plastid ribosomal proteins: identification of all the proteins in the 30S subunit of an organelle ribosome (chloroplast). J.Biol. Chem. 2000, 275:28455-28465.
6. Yamaguchi K., Subramanian A.R. The plastid ribosomal proteins: identification of all the proteins in the 50S subunit of an organelle ribosome (chloroplast). J.Biol. Chem. 2000, 275:28466-28482.
7. Yamaguchi K., Subramanian A.R. Proteomic identification of all plastid-specific ribosomal proteins in higher plant chloroplast 30S ribosomal subunit: PSRP-2 (U1A-type domains), PSRP-3α/β (ycf65 homologue) and PSRP-4 (Thx homologue). Eur. J. Biochem. 2003, 270:190-205.
8. Sharma M.R., Wilson D.N., Datta P.P., Barat C., Schluenzen F., Fucini P., Agrawal R.K. Cryo-EM study of the spinach chloroplast ribosome reveals the structural and functional roles of plastid-specific ribosomal proteins. Proc. Natl. Acad. Sci. U. S. A. 2007, 104:19315-19320.
9. Sharma M.R., Donhofer A., Barat C., Marquez V., Datta P.P., Fucini P., Wilson D.N., Agrawal R.K. PSRP1 is not a ribosomal protein, but a ribosome-binding factor that is recycled by the ribosome-recycling factor (RRF) and elongation factor G (EF-G). J.Biol. Chem. 2010, 285:4006-4014.
10. Tiller N., Weingartner M., Thiele W., Maximova E., Schottler M.A., Bock R. The plastid-specific ribosomal proteins of Arabidopsis thaliana can be divided into non-essential proteins and genuine ribosomal proteins. Plant J. 2012, 69:302-316.
11. Lorković Z.J., Barta A. Genomic analysis: RNA recognition motif (RRM) and K homology (KH) domain RNA-binding proteins from the flowering plant Arabidopsis thaliana. Nucl. Acid Res. 2002, 30:623-635.
12. Lorkovi-cacute Z.J. Role of plant RNA-binding proteins in development, stress response and genome organization. Trends Plant Sci. 2009, 14:229-236.
13. Ambrosone A., Costa A., Leone A., Grillo S. Beyond transcription: RNA-binding proteins as emerging regulators of plant response to environmental constraints. Plant Sci. 2012, 182:12-18.
14. Kim J.S., Park S.J., Kwak K.J., Kim Y.O., Kim J.Y., Song J., Jang B., Jung C.H., Kang H. Cold shock domain proteins and glycine-rich RNA-binding proteins from Arabidopsis thaliana can promote the cold adaptation process in Escherichia coli. Nucl. Acids Res. 2007, 35:506-516.
15. Kim M.K., Jung H.J., Kim D.H., Kang H. Characterization of glycine-rich RNA-binding proteins in Brassica napus under stress conditions. Physiol. Planta 2012, 146:297-307.
16. Bae W., Xia B., Inouye M., Severinov K. Escherichia coli CspA-family RNA chaperones are transcription antiterminators. Proc. Natl. Acad. Sci. U. S. A. 2000, 97:7784-7789.
17. Landick R., Stewart J., Lee D.N. Amino acid changes in conserved regions of the beta-subunit of Escherichia coli. RNA polymerase alter transcription pausing and termination. Genes Dev. 1990, 4:1623-1636.
18. Phadtare S., Inouye M., Severinov K. The nucleic acid melting activity of Escherichia coli CspE is critical for transcription antitermination and cold acclimation of cells. J.Biol. Chem. 2002, 277:7239-7245.
19. Nakaminami K., Karlson D., Imai R. Function conservation of cold shock domains in bacteria and higher plants. Proc. Natl. Acad. Sci. U. S. A. 2006, 103:10122-10127.
20. Rogalski M., Schöttler M.A., Thiele W., Schulze W.X., Bock R. Rpl33, a nonessential plastid-encoded ribosomal protein in tobacco, is required under cold stress conditions. Plant Cell 2008, 20:2221-2237.
21. Manuell A.L., Quispe J., Mayfield S.P. Structure of the chloroplast ribosome: novel domains for translation regulation. PLoS Biol. 2007, 5:e209.
22. Oubridge C., Ito N., Evans P.R., Teo C.H., Nagai K. Crystal structure at 1.92Å resolution of the RNA-binding domain of the U1A spliceosomal protein complexed with an RNA hairpin. Nature 1994, 372:432-438.
23. Semrad K. Proteins with RNA chaperone activity: a world of diverse proteins with a common task-Impediment of RNA misfolding. Biochem. Res. Int. 2011, 1-11. ID532908.
24. Jung H.J., Park S.J., Kang H. Regulation of RNA metabolism in plant development and stress responses. J.Plant Biol. 2013, 56:123-129.
25. Kang H., Park S.J., Kwak K.J. Plant RNA chaperones in stress response. Trends Plant Sci. 2013, 18:100-106.
26. Kim J.S., Jung H.J., Lee H.J., Kim K.A., Goh C.H., Woo Y.M., Oh S.H., Han Y.S., Kang H. Glycine-rich RNA-binding protein 7 affects abiotic stress responses by regulated stomata opening and closing in Arabidopsis thaliana. Plant J. 2008, 55:455-466.
27. Bechtold N., Pelletier G. In planta Agrobacterium-mediated transformation of adult Arabidopsis thaliana plants by vacuum infiltration. Methods Mol. Biol. 1998, 82:259-266.
28. Phadtare S., Alsina J., Inouye M. Cold-shock response and cold- shock proteins. Curr. Opin. Microbiol. 1999, 2:175-180.
29. Xia B., Ke H., Inouye M. Acquirement of cold sensitivity by quadruple deletion of the cspA family and its suppression by PNPase S1 domain in Escherichia coli. Mol. Microbiol. 2001, 40:179-188.