-
1
-
-
57649114800
-
Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic
-
Agogué H, Brink M, Dinasquet J, Herndl GJ (2008) Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic. Nature 456:788-791
-
(2008)
Nature
, vol.456
, pp. 788-791
-
-
Agogué, H.1
Brink, M.2
Dinasquet, J.3
Herndl, G.J.4
-
3
-
-
42049122119
-
Molecular and bio-geochemical evidence for ammonia oxidation by marine Crenarchaeota in the Gulf of California
-
Beman JM, Popp BN, Francis CA (2008) Molecular and bio-geochemical evidence for ammonia oxidation by marine Crenarchaeota in the Gulf of California. ISME J 2: 429-441
-
(2008)
ISME J
, vol.2
, pp. 429-441
-
-
Beman, J.M.1
Popp, B.N.2
Francis, C.A.3
-
4
-
-
78651082044
-
Global declines in oceanic nitrification rates as a consequence of ocean acidification
-
Beman JM, Chow CE, King AL, Feng Y and others (2011) Global declines in oceanic nitrification rates as a consequence of ocean acidification. Proc Natl Acad Sci USA 108:208-213
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 208-213
-
-
Beman, J.M.1
Chow, C.E.2
King, A.L.3
Feng, Y.4
-
5
-
-
84862011740
-
Quantification of ammonia oxidation rates and ammonia-oxidizing archaea and bacteria at high resolution in the Gulf of California and eastern tropical North Pacific Ocean
-
Beman JM, Popp BN, Alford SE (2012) Quantification of ammonia oxidation rates and ammonia-oxidizing archaea and bacteria at high resolution in the Gulf of California and eastern tropical North Pacific Ocean. Limnol Oceanogr 57:711-726
-
(2012)
Limnol Oceanogr
, vol.57
, pp. 711-726
-
-
Beman, J.M.1
Popp, B.N.2
Alford, S.E.3
-
6
-
-
79953280947
-
Seasonal and annual reoccurrence in beta-proteobacterial ammonia-oxidizing bacterial population structure
-
Bouskill NJ, Eveillard D, O'Mullan G, Jackson GA, Ward BB (2011) Seasonal and annual reoccurrence in beta-proteobacterial ammonia-oxidizing bacterial population structure. Environ Microbiol 13:872-886
-
(2011)
Environ Microbiol
, vol.13
, pp. 872-886
-
-
Bouskill, N.J.1
Eveillard, D.2
O'Mullan, G.3
Jackson, G.A.4
Ward, B.B.5
-
7
-
-
84857922921
-
Environmental factors determining ammonia-oxidizing organism distribution and diversity in marine environments
-
Bouskill NJ, Eveillard D, Chien D, Jayakumar A, Ward BB (2012a) Environmental factors determining ammonia-oxidizing organism distribution and diversity in marine environments. Environ Microbiol 14:714-729
-
(2012)
Environ Microbiol
, vol.14
, pp. 714-729
-
-
Bouskill, N.J.1
Eveillard, D.2
Chien, D.3
Jayakumar, A.4
Ward, B.B.5
-
8
-
-
84875828051
-
Trait-based representation of biological nitrification: Model development, testing, and predicted community composition
-
Bouskill NJ, Tang J, Riley WJ, Brodie EL (2012b) Trait-based representation of biological nitrification: model development, testing, and predicted community composition. Front Microbiol 3:364
-
(2012)
Front Microbiol
, vol.3
, pp. 364
-
-
Bouskill, N.J.1
Tang, J.2
Riley, W.J.3
Brodie, E.L.4
-
9
-
-
35948999268
-
Ammonia oxidation and ammonia-oxidizing bacteria and archaea from estuaries with differing histories of hypoxia
-
Caffrey JM, Bano N, Kalanetra K, Hollibaugh JT (2007) Ammonia oxidation and ammonia-oxidizing bacteria and archaea from estuaries with differing histories of hypoxia. ISME J 1:660-662
-
(2007)
ISME J
, vol.1
, pp. 660-662
-
-
Caffrey, J.M.1
Bano, N.2
Kalanetra, K.3
Hollibaugh, J.T.4
-
10
-
-
84863116517
-
Lower abundance of ammonia-oxidizing archaea than ammonia-oxidizing bacteria detected in the subsurface sediments of the northern South China Sea
-
Cao H, Hong Y, Li M, Gu JD (2012) Lower abundance of ammonia-oxidizing archaea than ammonia-oxidizing bacteria detected in the subsurface sediments of the northern South China Sea. Geomicrobiol J 29:332-339
-
(2012)
Geomicrobiol J
, vol.29
, pp. 332-339
-
-
Cao, H.1
Hong, Y.2
Li, M.3
Gu, J.D.4
-
11
-
-
2142689183
-
Nitrification and nitrifying bacteria in the lower Seine River and estuary (France)
-
Cébron A, Berthe T, Garnier J (2003) Nitrification and nitrifying bacteria in the lower Seine River and estuary (France). Appl Environ Microbiol 69:7091-7100
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 7091-7100
-
-
Cébron, A.1
Berthe, T.2
Garnier, J.3
-
13
-
-
79955675753
-
Phytoplankton succession and nitrogen utilization during the development of an upwelling bloom
-
Fawcett SE, Ward BB (2011) Phytoplankton succession and nitrogen utilization during the development of an upwelling bloom. Mar Ecol Prog Ser 428:13-31
-
(2011)
Mar Ecol Prog ser
, vol.428
, pp. 13-31
-
-
Fawcett, S.E.1
Ward, B.B.2
-
15
-
-
26844541457
-
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
-
Francis CA, Roberts KJ, Beman JM, Santoro AE, Oakley BB (2005) Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proc Natl Acad Sci USA 102:14683-14688
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 14683-14688
-
-
Francis, C.A.1
Roberts, K.J.2
Beman, J.M.3
Santoro, A.E.4
Oakley, B.B.5
-
16
-
-
0007655891
-
Inorganic carbon uptake by phytoplankton in Vineyard Sound, Massachusetts. II. Comparative primary productivity and nutritional status of winter and summer assemblages
-
Glibert PM, Dennett MR, Goldman JC (1985) Inorganic carbon uptake by phytoplankton in Vineyard Sound, Massachusetts. II. Comparative primary productivity and nutritional status of winter and summer assemblages. J Exp Mar Biol Ecol 86:101-118
-
(1985)
J Exp Mar Biol Ecol
, vol.86
, pp. 101-118
-
-
Glibert, P.M.1
Dennett, M.R.2
Goldman, J.C.3
-
17
-
-
33845286513
-
Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum
-
Hallam SJ, Konstantinidis KT, Putnam N, Schleper C and others (2006) Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum. Proc Natl Acad Sci USA 103:18296-18301
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 18296-18301
-
-
Hallam, S.J.1
Konstantinidis, K.T.2
Putnam, N.3
Schleper, C.4
-
19
-
-
78650614634
-
Will ocean acidification affect marine microbes?
-
Joint I, Doney SC, Karl DM (2011) Will ocean acidification affect marine microbes? ISME J 5:1-7
-
(2011)
ISME J
, vol.5
, pp. 1-7
-
-
Joint, I.1
Doney, S.C.2
Karl, D.M.3
-
20
-
-
80655125071
-
Impact of ocean acidification on benthic and water column ammonia oxidation
-
doi:10.1029/2011GL049095
-
Kitidis V, Laverock B, McNeill LC, Beesley A and others (2011) Impact of ocean acidification on benthic and water column ammonia oxidation. Geophys Res Lett 38:L21603, doi:10.1029/2011GL049095
-
(2011)
Geophys Res Lett
, vol.38
-
-
Kitidis, V.1
Laverock, B.2
McNeill, L.C.3
Beesley, A.4
-
21
-
-
84867417676
-
Small changes in pH have direct effects on marine bacterial community composition: A microcosm approach
-
Krause E, Wichels A, Giménez L, Lunau M, Schilhabel MB, Gerdts G (2012) Small changes in pH have direct effects on marine bacterial community composition: a microcosm approach. PLoS ONE 7:e47035
-
(2012)
PLoS ONE
, vol.7
-
-
Krause, E.1
Wichels, A.2
Giménez, L.3
Lunau, M.4
Schilhabel, M.B.5
Gerdts, G.6
-
22
-
-
0033994908
-
Nutrient regulation of phytoplankton productivity in Monterey Bay
-
Kudela RM, Dugdale RC (2000) Nutrient regulation of phytoplankton productivity in Monterey Bay, California. Deep-Sea Res II 47:1023-1053
-
(2000)
California. Deep-Sea Res II
, vol.47
, pp. 1023-1053
-
-
Kudela, R.M.1
Dugdale, R.C.2
-
23
-
-
34247847886
-
Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre
-
Mincer TJ, Church MJ, Taylor LT, Preston C, Karl DM, DeLong EF (2007) Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre. Environ Microbiol 9:1162-1175
-
(2007)
Environ Microbiol
, vol.9
, pp. 1162-1175
-
-
Mincer, T.J.1
Church, M.J.2
Taylor, L.T.3
Preston, C.4
Karl, D.M.5
Delong, E.F.6
-
24
-
-
52949134066
-
Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary
-
Mosier AC, Francis CA (2008) Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary. Environ Microbiol 10: 3002-3016
-
(2008)
Environ Microbiol
, vol.10
, pp. 3002-3016
-
-
Mosier, A.C.1
Francis, C.A.2
-
25
-
-
52949137846
-
The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria
-
Nicol GW, Leininger S, Schleper C, Prosser JI (2008) The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria. Environ Microbiol 10:2966-2978
-
(2008)
Environ Microbiol
, vol.10
, pp. 2966-2978
-
-
Nicol, G.W.1
Leininger, S.2
Schleper, C.3
Prosser, J.I.4
-
27
-
-
26944481617
-
Anthropogenic ocean acidification over the twenty-first century and its impact on calcifying organisms
-
Orr JC, Fabry VJ, Aumont O, Bopp L and others (2005) Anthropogenic ocean acidification over the twenty-first century and its impact on calcifying organisms. Nature 437:681-686
-
(2005)
Nature
, vol.437
, pp. 681-686
-
-
Orr, J.C.1
Fabry, V.J.2
Aumont, O.3
Bopp, L.4
-
28
-
-
13444293188
-
Environmental pH as an important factor for the distribution of urease positive ammonia-oxidizing bacteria
-
Pommerening-Röser A, Koops HP (2005) Environmental pH as an important factor for the distribution of urease positive ammonia-oxidizing bacteria. Microbiol Res 160: 27-35
-
(2005)
Microbiol Res
, vol.160
, pp. 27-35
-
-
Pommerening-Röser, A.1
Koops, H.P.2
-
29
-
-
0030814870
-
The ammonia monooxygenase structural gene amoA as a functional marker: Molecular fine-scale analysis of natural ammonia-oxidizing populations
-
Rotthauwe JH, Witzel KP, Liesack W (1997) The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations. Appl Environ Microbiol 63: 4704-4712
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 4704-4712
-
-
Rotthauwe, J.H.1
Witzel, K.P.2
Liesack, W.3
-
30
-
-
0024192216
-
Disruption of the nitrogen cycle in acidified lakes
-
Rudd JWM, Kelly CA, Schindler DW, Turner MA (1988) Disruption of the nitrogen cycle in acidified lakes. Science 240:1515-1517
-
(1988)
Science
, vol.240
, pp. 1515-1517
-
-
Jwm, R.1
Kelly, C.A.2
Schindler, D.W.3
Turner, M.A.4
-
31
-
-
78049432317
-
Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current
-
Santoro AE, Casciotti KL, Francis CA (2010) Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current. Environ Microbiol 12: 1989-2006
-
(2010)
Environ Microbiol
, vol.12
, pp. 1989-2006
-
-
Santoro, A.E.1
Casciotti, K.L.2
Francis, C.A.3
-
32
-
-
70749121013
-
2 control method on medium chemistry and phytoplankton growth
-
2 control method on medium chemistry and phytoplankton growth. Biogeosciences 6:1199-1207
-
(2009)
Biogeosciences
, vol.6
, pp. 1199-1207
-
-
Shi, D.1
Xu, Y.2
Fmm, M.3
-
33
-
-
52949112412
-
Phytoplankton community composition and gene expression of functional genes involved in carbon and nitrogen assimilation
-
Ward B (2008) Phytoplankton community composition and gene expression of functional genes involved in carbon and nitrogen assimilation. J Phycol 44:1490-1503
-
(2008)
J Phycol
, vol.44
, pp. 1490-1503
-
-
Ward, B.1
-
34
-
-
34548434689
-
Ammonia-oxidizing bacterial community composition in estuarine and oceanic envi ronments assessed using a functional gene microarray
-
Ward BB, Eveillard D, Kirshtein JD, Nelson JD, Voytek MA, Jackson GA (2007) Ammonia-oxidizing bacterial community composition in estuarine and oceanic envi ronments assessed using a functional gene microarray. Environ Microbiol 9:2522-2538
-
(2007)
Environ Microbiol
, vol.9
, pp. 2522-2538
-
-
Ward, B.B.1
Eveillard, D.2
Kirshtein, J.D.3
Nelson, J.D.4
Voytek, M.A.5
Jackson, G.A.6
-
35
-
-
79956280960
-
Contribution of crenarchaeal autotrophic ammonia oxidizers to the dark primary production in Tyrrhenian deep waters (Central Mediterranean Sea)
-
Yakimov MM, Cono VL, Smedile F, DeLuca TH and others (2011) Contribution of crenarchaeal autotrophic ammonia oxidizers to the dark primary production in Tyrrhenian deep waters (Central Mediterranean Sea). ISME J 5:945-961
-
(2011)
ISME J
, vol.5
, pp. 945-961
-
-
Yakimov, M.M.1
Cono, V.L.2
Smedile, F.3
Deluca, T.H.4
-
36
-
-
34250896177
-
The significance of nitrification for oceanic new production
-
YoolA, Martin AP, Fernández C, Clark DR (2007) The significance of nitrification for oceanic new production. Nature 447:999-1002
-
(2007)
Nature
, vol.447
, pp. 999-1002
-
-
Yoola Martin, A.P.1
Fernández, C.2
Clark, D.R.3
-
37
-
-
0030049708
-
Spectrophotometric pH measurements of surface seawater at in-situ conditions: Ab-sorbance and protonation behavior of thymol blue
-
Zhang H, Byrne RH (1996) Spectrophotometric pH measurements of surface seawater at in-situ conditions: ab-sorbance and protonation behavior of thymol blue. Mar Chem 52:17-25
-
(1996)
Mar Chem
, vol.52
, pp. 17-25
-
-
Zhang, H.1
Byrne, R.H.2
|