Will ocean acidification affect marine microbes

ISME Journal

Volumn 5, Issue 1, 2011, Pages 1-7

  Joint, Ian ^a   Doney, Scott C ^b   Karl, David M ^c  

^a PLYMOUTH MARINE LABORATORY   (United Kingdom)

^b WOODS HOLE OCEANOGRAPHIC INSTITUTION   (United States)

^c UNIVERSITY OF HAWAII   (United States)

Author keywords

biogeochemical processes; ocean acidification; rapid pH change

Indexed keywords

SEA WATER;

ACIDIFICATION; AQUATIC ENVIRONMENT; ASSESSMENT METHOD; BIOGEOCHEMICAL CYCLE; CARBON DIOXIDE; FRESHWATER ENVIRONMENT; LAKE; MAGNITUDE; MARINE ENVIRONMENT; MARINE POLLUTION; MICROBIAL COMMUNITY; NITRIFICATION; PH;

ARTICLE; BACTERIUM; CHEMISTRY; METABOLISM; MICROBIOLOGY; PH; SEA;

BACTERIA; HYDROGEN-ION CONCENTRATION; OCEANS AND SEAS; SEAWATER; WATER MICROBIOLOGY;

EID: 78650614634     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2010.79     Document Type: Article

References (48)

1. Allen EJ, Nelson EW. (1910). On the artificial culture of marine plankton organisms. J Mar Biol Assoc UK 8: 421-474.
2. Atkins WRG. (1922). The hydrogen ion concentration of sea water in its biological relation. J Mar Biol Assoc UK 12: 717-771.
3. Beman JM, Chow CE, Popp BN, Fuhrman JA, Feng Y, Hutchins DA. (2009). Alteration of oceanic nitrification under elevated carbon dioxide concentrations. Paper abstract, ASLO Aquatic Sciences Meeting, Nice, France, January 25-30, 2009 (http://www.aslo.org/meetings/nice2009/files.html).
4. Booth IR. (1985). Regulation of cytoplasmic pH in bacteria. Microbiol Rev 49: 359-378.
5. Boyd PW, Doney SC, Strzepek R, Dusenberry J, Lindsay K, Fung I. (2008). Climate-mediated changes to mixedlayer properties in the Southern Ocean: assessing the phytoplankton response. Biogeosciences 5: 847-864.
6. Brewer PG, Peltzer ET. (2009). Limits to marine life. Science 324: 347-348.
7. Caldeira K, Wickett ME. (2003). Anthropogenic carbon and ocean pH. Nature 425: 365.
8. 2 in a green alga. Nature 431: 566-569.
9. 2 during experimental blooms of the coccolithophorid Emiliania huxleyi. Global Biogeochem Cycles 19: GB2023.
10. DeLong EF, Preston CM, Mincer T, Rich V, Hallam SJ, Frigaard NU. et al. (2006). Community genomics among stratified microbial assemblages in the ocean's interior. Science 311: 296-503.
11. Doney SC, Abbott MR, Cullen JJ, Karl DM, Rothstein L. (2004). From genes to ecosystems: the ocean's new frontier. Frontiers Ecol Environ 2: 457-466.
12. 2 problem. Annu Rev Mar Sci 1: 169-192.
13. Dore JE, Lukas R, Sadler DW, Church MJ, Karl DM. (2009). Physical and biogeochemical modulation of ocean acidification in the central North Pacific. Proc Natl Acad Sci 106: 12235-12240.
14. 2 concentrations. Biogeosciences 6: 877-885.
15. Fabry VJ, Seibel BA, Feely RA, Orr JC. (2008). Impacts of ocean acidification on marine fauna and ecosystem processes. ICES J Mar Sci 65: 414-432.
16. Field KG, Gordon D,Wright T, Rapp M, Urbach E, Vergin K et al. (1997). Diversity and depth-specific distribution of SAR11 cluster rRNA genes from marine planktonic bacteria. Appl Environ Microbiol 63: 63-70.
17. 2 on photosynthesis, growth and elemental ratios of marine Synechococcus and Prochlorococcus (cyanobacteria). J Phycol 43: 485-496.
18. Gilbert JA, Field D, Huang Y, Edwards R, Li W, Gilna P et al. (2008). Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities. PLoS One 3: e3042.
19. 2 concentration on the dynamics of marine heterotrophic bacterioplankton. Limnol Oceanogr 51: 1-11.
20. Hopkins FE, Turner SM, Nightingale PD, Steinke M, Bakker D, Liss PS. (2010). Ocean acidification and marine trace gas emissions. Proc Natl Acad Sci 107: 760-765.
21. Huesemann MH, Skillman AD, Crecelius EA. (2002). The inhibition of marine nitrification by ocean disposal of carbon dioxide. Marine Pollution Bulletin 44: 142-148.
22. 2 control of Trichodesmium N2 fixation, photosynthesis, growth rates, and elemental ratios: implications for past, present, and future ocean biogeochemistry. Limnol Oceanogr 52: 1293-1304.
23. 2-enriched ocean. Oceanography 22: 128-145.
24. 2 world. Science 320: 336-340.
25. Keeling RF, Kortzinger A, Gruber N. (2010). Ocean deoxygenation in a warming world. Ann Rev Mar Sci 2: 199-229.
26. 2 concentration on growth of a natural phytoplankton assemblage in a controlled mesocosm experiment. Limnol Oceanogr 51: 1629-1636.
27. Kump LR, Bralower TJ, Ridgwell A. (2009). Ocean acidification in deep time. Oceanography 22: 94-107.
28. Langer MR, Geisen M, Baumann K-H, Klas J, Riebesell U, Thoms S et al. (2006). Species-specific responses of calcifying algae to changing seawater carbonate chemistry. Geochem Geophys Geosys 7: Q09006.
29. Leonardos N, Geider RJ. (2005). Elevated atmospheric carbon dioxide increases organic carbon fixation by Emiliania huxleyi (Haptophyta), under nutrient-limited, high-light conditions. J Phycol 41: 1196-1203.
30. 2 enhances nitrogen fixation and growth in the marine cyanobacterium Trichodesmium. Global Change Biol 13: 531-538.
31. Maberly SC. (1996). Diel, episodic and seasonal changes in pH and concentrations of inorganic carbon in a productive lake. Freshwater Biol 35: 579-598.
32. Pearson PN, Palmer MR (2000). Atmospheric carbon dioxide concentrations over the past 60 million years. Nature 406:695-699.
33. 2 ocean. Nature 450: 545-548.
34. 2. Nature 407: 364-367.
35. Ridgwell A, Schmidt DN, Turley C, Brownlee C, Maldonado M, Tortell P et al. (2009). From laboratory manipulations to Earth system models: scaling calcification impacts of ocean acidification. Biogeosciences 6: 2611-2623.
36. Robinson C, Poulton AJ, Holligan PM, Baker AR, Forster G, Gist N et al. (2006). The Atlantic Meridional Transect (AMT) programme: a contextual view 1995-2005. Deep-Sea Res Part II: Top Stud Oceanogr 53: 1649-1665.
37. Rost B, Zondervan I, Wolf-Gladrow D. (2008). Sensitivity of phytoplankton to future changes in ocean carbonate chemistry: current knowledge, contradictions and research directions. Mar Ecol Prog Ser 373: 227-237.
38. Salisbury J, Green M, Hunt C, Campbell J. (2008). Coastal acidification by rivers: a threat to shellfish? Eos 89: 513-528.
39. Schattenhofer M, Fuchs BM, Amann R, Zubkov MV, Tarran GA, Pernthaler J. (2009). Latitudinal distribution of prokaryotic picoplankton populations in the Atlantic Ocean. Environ Microbiol 11: 2078-2093.
40. Shibca SV, Hedgpeth DW, Park PK. (1977). Dissolved oxygen and pH increases by primary production in the surface water of Arthur Harbor, Antarctica 1970-71. In: Llano, GA (ed). Adaptations within Antarctic Ecosystems: Proceedings of the Third SCAR Symposium on Antarctic Biology. Smithsonian Institution: Washington, pp 83-97.
41. Shi DL, Xu Y, Hopkinson BM, Morel FMM. (2010). Effect of ocean acidification on iron availability to marine phytoplankton. Science 327: 676-679.
42. Sogin ML, Morrison HG, Huber JA, Mark Welch D, Huse SM, Neal PR et al. (2006). Microbial diversity in the deep sea and the underexplored 'rare biosphere'. Proc Natl Acad Sci 103: 12115-12120.
43. Steinacher M, Joos F, Frölicher TL, Bopp L, Cadule P, Cocco V et al. (2010). Projected 21st century decrease in marine productivity: a multi-model analysis. Biogeosciences 7: 979-1005.
44. Talling JF. (2006). Interrelated seasonal shifts in acid-base and oxidation-reduction systems that determine chemical stratification in three dissimilar English lake basins. Hydrobiol 568: 275-286.
45. Tortell PD, Rau GH, Morel FMM. (2000). Inorganic carbon acquisition in coastal Pacific phytoplankton communities. Limnol Oceanogr 45: 1485-1500.
46. Tortell PD, Reinfelder JR, Morel FMM. (1997). Active uptake of bicarbonate by diatoms. Nature 390: 243-244.
47. 2 sensitivity of Southern Ocean phytoplankton. Geophys Res Lett 35: L04605.
48. Wootton JT, Pfister CA, Forester JD. (2008). Dynamic patterns and ecological impacts of declining ocean pH in a high-resolution multi-year dataset. Proc Natl Acad Sci 105: 18848-18853.