Differentiation of strains from the Bacillus cereus group by RFLP-PFGE genomic fingerprinting

Electrophoresis

Volumn 34, Issue 20-21, 2013, Pages 3023-3028

  Otlewska, Anna ^a   Oltuszak Walczak, Elzbieta ^a   Walczak, Piotr ^a  

^a LODZ UNIVERSITY OF TECHNOLOGY   (Poland)

Author keywords

Bacillus cereus group; Cluster analysis; RFLP PFGE; UPGMA

Indexed keywords

BACILLUS CEREUS; BACTERIOLOGY; FOOD PRODUCTS; GENES;

BACILLUS ANTHRACIS; BACILLUS CEREUS GROUPS; BACILLUS MYCOIDES; BACILLUS THURINGIENSIS; GENOMIC DNA; GENOMIC FINGERPRINTING; REFERENCE STRAINS; RFLP-PFGE; SPECTRA'S; UPGMA;

CLUSTER ANALYSIS;

GENOMIC DNA; RNA 16S;

ARTICLE; BACILLUS ANTHRACIS; BACILLUS CEREUS; BACILLUS MYCOIDES; BACILLUS THURINGIENSIS; BACILLUS WEIHENSTEPHANENSIS; BACTERIAL STRAIN; BACTERIUM ISOLATE; CONTROLLED STUDY; DNA FINGERPRINTING; GENETIC POLYMORPHISM; NONHUMAN; NUCLEOTIDE SEQUENCE; PULSED FIELD GEL ELECTROPHORESIS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RNA SEQUENCE; STRAIN DIFFERENCE;

BACILLUS CEREUS GROUP; CLUSTER ANALYSIS; RFLP-PFGE; UPGMA;

BACILLUS; BACILLUS CEREUS; CLUSTER ANALYSIS; DNA, BACTERIAL; ELECTROPHORESIS; FOOD MICROBIOLOGY; GENOME, BACTERIAL; GENOMICS; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH;

EID: 84887406183     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.201300246     Document Type: Article

References (31)

1. Stenfors Arnesen, L. P., Fagerlund, A., Granun, P. E., FEMS Microbiol. Rev. 2008, 32, 579-606.
2. Swiecicka, I., Mahillon, J., FEMS Microbiol. Ecol. 2006, 56, 132-140.
3. Guinebretiere, M. H., Auger, S., Galleron N., Contzen, M., De Sarrau, B., De Buyser M. L., Lamberet, G., Fagerlund, A., Granum, P. E., Lereclus, D., De Vos, P., Nguyen-The, C., Sorokin, A., Int. J. Syst. Evol. Microbiol. 2013, 6, 31-40.
4. Carlson, C. R., Johansen, T., Lecadet, M. M., Kolsto, A. B., Microbiology 1996, 142, 1625-1634.
5. Swiecicka, I., de Vos, P., J. Appl. Microbiol. 2003, 94, 60-64.
6. Bartoszewicz, M., Hansen, B. M., Swiecicka, I., Food Microbiol. 2008, 25, 588-596.
7. Helgason, E., Okstad, O. A., Caugant, D. A., Johansen, H. A., Fouet, A., Mock, M., Hegna, I., Kolsto, A. B., Appl. Environ. Microbiol. 2000, 66, 2627-2630.
8. Kim, J. B., Park, J. S., Kim, M. S., Hong, S. C., Park, J. H., Oh, D. H., Int. J. Food Microbiol. 2011, 150, 66-72.
9. Young-Rok, K., Batt, C. A., J. Microbiol. Biotechnol. 2008, 18, 1146-1155.
10. Carlson, C. R., Caugant, D. A., Kolsto, A. B., Appl. Environ. Microbiol. 1994, 60, 1719-1725.
11. Tourasse, N. J., Helgason, E., Okstad, O. A., Hegna, I. K., Kolsto, A. -B., J. Appl. Microbiol. 2006, 101, 579-593.
12. Vilas-Boas, G. T., Peruca, A. P. S., Arantes, O. M. N., Can. J. Microbiol. 2007, 53, 673-687.
13. Cherif, A., Brusetti, L., Borin, S., Rizzi, A., Boudabous, A., Khyami-Horani, H., Daffonchio, D., J. Appl. Microbiol. 2003, 94, 1108-1119.
14. Vilas-Boas, G. T., Sanchis, V., Lereclus, D., Lemos, M. V. F., Bourguet, D., Appl. Environ. Microbiol. 2002, 68, 1414-1424.
15. Brumlik, M. J., Szymajda, U., Zakowska, D., Liang, X., Redkar, R. J., Patra, G., Del Vecchio, V. G., Appl. Environ. Microbiol. 2001, 67, 3021-3028.
16. Carlson, C. R., Johansen, T., Kolsto, A. B., FEMS Microbiol. Lett. 1996, 141, 163-167.
17. Shangkuan, Y. -H., Yang, J. -F., Lin, H. -C., Shaio, M.-F., J. Appl. Microbiol. 2000, 89, 452-462.
18. Lopez, A. C., Alippi, A. M., Int. J. Food Microbiol. 2007, 117, 175-184.
19. Zhong, W., Shou, Y., Yoshida, T. M., Marrone, B. L., Appl. Environ. Microbiol. 2007, 73, 3446-3449.
20. Hill, K. K., Ticknor, L. O., Okinaka, R. T., Asay, M., Blair, H., Bliss, K. A., Laker, M., Pardington, P. E., Richardson, A. P., Tonks, M., Beecher, D. J., Kemp, J. D., Kolstø, A. B., Wong, A. C. L., Keim, P. Jackson, P. J., Appl. Environ. Microbiol. 2004, 70, 1068-1070.
21. Swiecicka, I., Curr. Microbiol. 2003, 46, 256-260.
22. Niemcewicz, M., Bartoszcze M., Med. Wet. 2006, 9, 1065-1070 [in Polish].
23. Ehling-Schultz, M., Messelhausser, U., Front. Microbiol. 2013, 4, 32.
24. Smith, C. L., Cantor, Ch. R., Methods Enzymol. 1987, 155, 449-467.
25. Huang, E. T. S., Chu, Y. -W., Ng, T.-K., Cheng, A. F. B., J. Clin. Microbiol. 1998, 36, 2404-2407.
26. Carlson, C. R., Gronstad, A., Kolsto, A. B., J. Bacteriol. 1992, 174, 3750-3756.
27. Ladeuze, S., Lentz, N., Delbrassinne, L., Hu, X., Mahillon, J., Appl. Environ. Microbiol. 2011, 77, 2555-2558.
28. Rasko, D. A., Altherr, M. R., Han, C. S., Ravel, J., FEMS Microbiol. Rev. 2005, 29, 303-329.
29. Verheust, C., Fornelos, N., Mahillon, J., J. Bacteriol. 2005, 187, 1966-1973.
30. Priest, F. G., Barker, M., Baillie, L. W., Holmes, E. C., Maiden, M. C., J. Bacteriol. 2004, 186, 7959-7970.
31. Sorokin, A., Candelon, B., Guilloux, K., Galleron, N., Wackerow-Kouzova, N., Ehrlich, S. D., Borguet, D., Sanchis, V., Appl. Environ. Microbiol. 2006, 72, 1569-1578.