메뉴 건너뛰기




Volumn 6, Issue 1, 2013, Pages 1-15

Genetic analysis of an elite super-hybrid rice parent using high-density SNP markers

Author keywords

Effect analysis; Giant spike rice; Heterosis; MSG; QTL mapping; Yield components

Indexed keywords

JAPONICA;

EID: 84887361517     PISSN: 19398425     EISSN: 19398433     Source Type: Journal    
DOI: 10.1186/1939-8433-6-1     Document Type: Article
Times cited : (8)

References (61)
  • 1
    • 0345303841 scopus 로고    scopus 로고
    • Importance of ascorbate peroxidases OsAPX1 and OsAPX2 in the rice pathogen response pathways and growth and reproduction revealed by their transcriptional profiling
    • Agrawal G, Jwa N, Iwahashi H, Rakwal R (2003) Importance of ascorbate peroxidases OsAPX1 and OsAPX2 in the rice pathogen response pathways and growth and reproduction revealed by their transcriptional profiling. Gene 322:93-103
    • (2003) Gene , vol.322 , pp. 93-103
    • Agrawal, G.1    Jwa, N.2    Iwahashi, H.3    Rakwal, R.4
  • 5
    • 79960624736 scopus 로고    scopus 로고
    • Practice and creative ideals on super hybrid rice breeding
    • Chen LY (2007) Practice and creative ideals on super hybrid rice breeding. J Hunan Agric Univ (Natural Sciences) 33:21-25
    • (2007) J Hunan Agric Univ (Natural Sciences) , vol.33 , pp. 21-25
    • Chen, L.Y.1
  • 6
    • 84876171387 scopus 로고    scopus 로고
    • Thoughts and Practice of Some Problems about Research and Application of Two-Line Hybrid Rice
    • Chen LY, Lei DY, Tang WB, Xiao YH (2010) Thoughts and Practice of Some Problems about Research and Application of Two-Line Hybrid Rice. Chin J Rice Sci 24:641-646
    • (2010) Chin J Rice Sci , vol.24 , pp. 641-646
    • Chen, L.Y.1    Lei, D.Y.2    Tang, W.B.3    Xiao, Y.H.4
  • 7
    • 0012345791 scopus 로고    scopus 로고
    • Current status and prospect in the development of breeding materials and breeding methodology of hybrid rice
    • Cheng S (2000) Current status and prospect in the development of breeding materials and breeding methodology of hybrid rice. Chin J Rice Sci 14:165
    • (2000) Chin J Rice Sci , vol.14 , pp. 165
    • Cheng, S.1
  • 8
    • 0036217386 scopus 로고    scopus 로고
    • Genetic analysis of the panicle traits related to yield sink size of rice
    • Cui K, Peng S, Xing Y, Yu S, Xu C (2002) Genetic analysis of the panicle traits related to yield sink size of rice. Acta genetica Sinica 29:144
    • (2002) Acta Genetica Sinica , vol.29 , pp. 144
    • Cui, K.1    Peng, S.2    Xing, Y.3    Yu, S.4    Xu, C.5
  • 9
    • 0038531138 scopus 로고    scopus 로고
    • Molecular dissection of the genetic relationships of source, sink and transport tissue with yield traits in rice
    • Cui K, Peng S, Xing Y, Yu S, Xu C, Zhang Q (2003) Molecular dissection of the genetic relationships of source, sink and transport tissue with yield traits in rice. Theor Appl Genet 106:649-658
    • (2003) Theor Appl Genet , vol.106 , pp. 649-658
    • Cui, K.1    Peng, S.2    Xing, Y.3    Yu, S.4    Xu, C.5    Zhang, Q.6
  • 10
    • 4644280315 scopus 로고    scopus 로고
    • Molecular dissection of the relationships among tiller number, plant height and heading date in rice
    • Cui K, Peng S, Ying Y, Yu S, Xu C (2004) Molecular dissection of the relationships among tiller number, plant height and heading date in rice. Plant Prod Sci 7:309-318
    • (2004) Plant Prod Sci , vol.7 , pp. 309-318
    • Cui, K.1    Peng, S.2    Ying, Y.3    Yu, S.4    Xu, C.5
  • 13
    • 1942434700 scopus 로고    scopus 로고
    • Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1
    • Doi K, Izawa T, Fuse T, Yamanouchi U, Kubo T, Shimatani Z, Yano M, Yoshimura A (2004) Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1. Genes Dev 18:926-936
    • (2004) Genes Dev , vol.18 , pp. 926-936
    • Doi, K.1    Izawa, T.2    Fuse, T.3    Yamanouchi, U.4    Kubo, T.5    Shimatani, Z.6    Yano, M.7    Yoshimura, A.8
  • 14
    • 77954260451 scopus 로고    scopus 로고
    • Dissection of QTLs for Yield Traits on the Short Arm of Rice Chromosome 6
    • Du JH, Fan YY, Wu JR, Zhuang JY (2008) Dissection of QTLs for Yield Traits on the Short Arm of Rice Chromosome 6. Scientia Agricultura Sinica 41:939-945
    • (2008) Scientia Agricultura Sinica , vol.41 , pp. 939-945
    • Du, J.H.1    Fan, Y.Y.2    Wu, J.R.3    Zhuang, J.Y.4
  • 15
    • 79958830201 scopus 로고    scopus 로고
    • Flowering time genes Heading date 1 and Early heading date 1 together control panicle development in rice
    • Endo-Higashi N, Izawa T (2011) Flowering time genes Heading date 1 and Early heading date 1 together control panicle development in rice. Plant Cell Physiol 52:1083-1094
    • (2011) Plant Cell Physiol , vol.52 , pp. 1083-1094
    • Endo-Higashi, N.1    Izawa, T.2
  • 16
    • 69149104126 scopus 로고    scopus 로고
    • Dwarf 88, a novel putative esterase gene affecting architecture of rice plant
    • Gao Z, Qian Q, Liu X, Yan M, Feng Q, Dong G, Liu J, Han B (2009) Dwarf 88, a novel putative esterase gene affecting architecture of rice plant. Plant Mol Biol 71:265-276
    • (2009) Plant Mol Biol , vol.71 , pp. 265-276
    • Gao, Z.1    Qian, Q.2    Liu, X.3    Yan, M.4    Feng, Q.5    Dong, G.6    Liu, J.7    Han, B.8
  • 17
    • 84884956086 scopus 로고    scopus 로고
    • Research Progress of Yield Related Traits of Rice
    • Gao J, Xu JD, Yi L, Yuan SJ (2011) Research Progress of Yield Related Traits of Rice. Shandong Agric Sci 9:57-60
    • (2011) Shandong Agric Sci , vol.9 , pp. 57-60
    • Gao, J.1    Xu, J.D.2    Yi, L.3    Yuan, S.J.4
  • 20
    • 0034882520 scopus 로고    scopus 로고
    • Comparison of molecular linkage maps and agronomic trait loci between DH and RIL populations derived from the same rice cross
    • He P, Li J, Zheng X, Shen L, Lu C, Chen Y, Zhu L (2001) Comparison of molecular linkage maps and agronomic trait loci between DH and RIL populations derived from the same rice cross. Crop Sci 41:1240-1246
    • (2001) Crop Sci , vol.41 , pp. 1240-1246
    • He, P.1    Li, J.2    Zheng, X.3    Shen, L.4    Lu, C.5    Chen, Y.6    Zhu, L.7
  • 21
    • 0036069084 scopus 로고    scopus 로고
    • Molecular mapping of quantitative trait loci for plant growth, yield and yield related traits across three diverse locations in a doubled haploid rice population
    • Hittalmani S, Shashidhar H, Bagali PG, Huang N, Sidhu J, Singh V, Khush G (2002) Molecular mapping of quantitative trait loci for plant growth, yield and yield related traits across three diverse locations in a doubled haploid rice population. Euphytica 125:207-214
    • (2002) Euphytica , vol.125 , pp. 207-214
    • Hittalmani, S.1    Shashidhar, H.2    Bagali, P.G.3    Huang, N.4    Sidhu, J.5    Singh, V.6    Khush, G.7
  • 22
    • 27744510528 scopus 로고    scopus 로고
    • The rice brassinosteroid-deficient dwarf2 mutant, defective in the rice homolog of Arabidopsis DIMINUTO/ DWARF1, is rescued by the endogenously accumulated alternative bioactive brassinosteroid, dolichosterone
    • Hong Z, Ueguchi-Tanaka M, Fujioka S, Takatsuto S, Yoshida S, Hasegawa Y, Ashikari M, Kitano H, Matsuoka M (2005) The rice brassinosteroid-deficient dwarf2 mutant, defective in the rice homolog of Arabidopsis DIMINUTO/ DWARF1, is rescued by the endogenously accumulated alternative bioactive brassinosteroid, dolichosterone. Plant Cell 17:2243-2254
    • (2005) Plant Cell , vol.17 , pp. 2243-2254
    • Hong, Z.1    Ueguchi-Tanaka, M.2    Fujioka, S.3    Takatsuto, S.4    Yoshida, S.5    Hasegawa, Y.6    Ashikari, M.7    Kitano, H.8    Matsuoka, M.9
  • 23
    • 0036963688 scopus 로고    scopus 로고
    • Genetic dissection of an elite rice hybrid revealed that heterozygotes are not always advantageous for performance
    • Hua JP, Xing YZ, Xu CG, Sun XL, Yu SB, Zhang Q (2002) Genetic dissection of an elite rice hybrid revealed that heterozygotes are not always advantageous for performance. Genetics 162:1885-1895
    • (2002) Genetics , vol.162 , pp. 1885-1895
    • Hua, J.P.1    Xing, Y.Z.2    Xu, C.G.3    Sun, X.L.4    Yu, S.B.5    Zhang, Q.6
  • 25
    • 0346038795 scopus 로고    scopus 로고
    • The OsFOR1 gene encodes a polygalacturonase-inhibiting protein (PGIP) that regulates floral organ number in rice
    • Jang S, Lee B, Kim C, Kim SJ, Yim J, Han JJ, Lee S, Kim SR, An G (2003) The OsFOR1 gene encodes a polygalacturonase-inhibiting protein (PGIP) that regulates floral organ number in rice. Plant Mol Biol 53:357-372
    • (2003) Plant Mol Biol , vol.53 , pp. 357-372
    • Jang, S.1    Lee, B.2    Kim, C.3    Kim, S.J.4    Yim, J.5    Han, J.J.6    Lee, S.7    Kim, S.R.8    An, G.9
  • 27
    • 80755136625 scopus 로고    scopus 로고
    • OsIAA23-mediated auxin signaling defines postembryonic maintenance of QC in rice
    • Jun N, Gaohang W, Zhenxing Z, Huanhuan Z, Yunrong W, Ping W (2011) OsIAA23-mediated auxin signaling defines postembryonic maintenance of QC in rice. Plant J 68:433-442
    • (2011) Plant J , vol.68 , pp. 433-442
    • Jun, N.1    Gaohang, W.2    Zhenxing, Z.3    Huanhuan, Z.4    Yunrong, W.5    Ping, W.6
  • 28
    • 64949181748 scopus 로고    scopus 로고
    • Methyl jasmonate reduces grain yield by mediating stress signals to alter spikelet development in rice
    • Kim EH, Kim YS, Park SH, Koo YJ, Do Choi Y, Chung YY, Lee IJ, Kim JK (2009) Methyl jasmonate reduces grain yield by mediating stress signals to alter spikelet development in rice. Plant Physiol 149:1751-1760
    • (2009) Plant Physiol , vol.149 , pp. 1751-1760
    • Kim, E.H.1    Kim, Y.S.2    Park, S.H.3    Koo, Y.J.4    Do Choi, Y.5    Chung, Y.Y.6    Lee, I.J.7    Kim, J.K.8
  • 29
    • 0029805706 scopus 로고    scopus 로고
    • The new genomics: Global views of biology
    • Lander ES (1996) The new genomics: global views of biology. Science 274:536-539
    • (1996) Science , vol.274 , pp. 536-539
    • Lander, E.S.1
  • 30
    • 71649083943 scopus 로고    scopus 로고
    • Rice cellulose synthase-like D4 is essential for normal cell-wall biosynthesis and plant growth
    • Li M, Xiong G, Li R, Cui J, Tang D, Zhang B, Pauly M, Cheng Z, Zhou Y (2009a) Rice cellulose synthase-like D4 is essential for normal cell-wall biosynthesis and plant growth. Plant J 60:1055-1069
    • (2009) Plant J , vol.60 , pp. 1055-1069
    • Li, M.1    Xiong, G.2    Li, R.3    Cui, J.4    Tang, D.5    Zhang, B.6    Pauly, M.7    Cheng, Z.8    Zhou, Y.9
  • 33
    • 84884962905 scopus 로고    scopus 로고
    • Breeding and Application of New Strong Heterosis Hybrid Rice Combination Liangyou 1128
    • Liu H, Deng ZQ, Deng LF, Deng XL (2012a) Breeding and Application of New Strong Heterosis Hybrid Rice Combination Liangyou 1128. Hybrid Rice 27:17-19
    • (2012) Hybrid Rice , vol.27 , pp. 17-19
    • Liu, H.1    Deng, Z.Q.2    Deng, L.F.3    Deng, X.L.4
  • 34
    • 84879527931 scopus 로고    scopus 로고
    • Genetics and Breeding Improvement for Panicle Type in Rice
    • Liu J, Tao H, Shi S, Ye W, Qian Q, Guo L (2012b) Genetics and Breeding Improvement for Panicle Type in Rice. Chin J Rice Sci 26:227-234
    • (2012) Chin J Rice Sci , vol.26 , pp. 227-234
    • Liu, J.1    Tao, H.2    Shi, S.3    Ye, W.4    Qian, Q.5    Guo, L.6
  • 35
    • 0035230102 scopus 로고    scopus 로고
    • Quantitative trait loci in Drosophila
    • Mackay TFC (2001) Quantitative trait loci in Drosophila. Nat Rev Genet 2:11-20
    • (2001) Nat Rev Genet , vol.2 , pp. 11-20
    • Mackay, T.F.C.1
  • 36
    • 34248632501 scopus 로고    scopus 로고
    • Identification and mapping of yield and yield related QTLs from an Indian accession of Oryza rufipogon
    • Marri PR, Sarla N, Reddy LV, Siddiq E (2005) Identification and mapping of yield and yield related QTLs from an Indian accession of Oryza rufipogon. BMC genetics 6:1-14
    • (2005) BMC Genetics , vol.6 , pp. 1-14
    • Marri, P.R.1    Sarla, N.2    Reddy, L.V.3    Siddiq, E.4
  • 40
    • 2142758309 scopus 로고    scopus 로고
    • Characterization of QTLs for Harvest Index and SourceKsink Characters in a DH Population of Rice (Oryza sativa L.)
    • Ping L, Likhuang Z, Yingkguo Z (2003) Characterization of QTLs for Harvest Index and SourceKsink Characters in a DH Population of Rice (Oryza sativa L.). J Genet Genomics 30:1118-1126
    • (2003) J Genet Genomics , vol.30 , pp. 1118-1126
    • Ping, L.1    Likhuang, Z.2    Yingkguo, Z.3
  • 41
    • 0031810508 scopus 로고    scopus 로고
    • Quantitative trait locus analysis for rice panicle and grain characteristics
    • Redona E, Mackill D (1998) Quantitative trait locus analysis for rice panicle and grain characteristics. Theor Appl Genet 96:957-963
    • (1998) Theor Appl Genet , vol.96 , pp. 957-963
    • Redona, E.1    Mackill, D.2
  • 43
    • 85006041928 scopus 로고    scopus 로고
    • Food security for Africa: An urgent global challenge
    • Sasson A (2012) Food security for Africa: an urgent global challenge. Agr Food Secur 1:1-16
    • (2012) Agr Food Secur , vol.1 , pp. 1-16
    • Sasson, A.1
  • 44
    • 1542531567 scopus 로고    scopus 로고
    • Identification of QTLs for lengths of the top internodes and other traits in rice and analysis of their genetic effects
    • Tan Z, Shen L, Kuang H, Lu C, Chen Y, Zhou K, Zhu L (1996) Identification of QTLs for lengths of the top internodes and other traits in rice and analysis of their genetic effects. Acta Genet Sin 23:439-446
    • (1996) Acta Genet Sin , vol.23 , pp. 439-446
    • Tan, Z.1    Shen, L.2    Kuang, H.3    Lu, C.4    Chen, Y.5    Zhou, K.6    Zhu, L.7
  • 45
    • 0141787882 scopus 로고    scopus 로고
    • Three distinct rice cellulose synthase catalytic subunit genes required for cellulose synthesis in the secondary wall
    • Tanaka K, Murata K, Yamazaki M, Onosato K, Miyao A, Hirochika H (2003) Three distinct rice cellulose synthase catalytic subunit genes required for cellulose synthesis in the secondary wall. Plant Physiol 133:73-83
    • (2003) Plant Physiol , vol.133 , pp. 73-83
    • Tanaka, K.1    Murata, K.2    Yamazaki, M.3    Onosato, K.4    Miyao, A.5    Hirochika, H.6
  • 47
    • 0041473833 scopus 로고    scopus 로고
    • Mapping quantitative trait loci for yield, yield components and morphological traits in an advanced backcross population between Oryza rufipogon and the Oryza sativa cultivar Jefferson
    • Thomson M, Tai T, Mcclung A, Lai X, Hinga M, Lobos K, Xu Y, Martinez C, Mccouch S (2003) Mapping quantitative trait loci for yield, yield components and morphological traits in an advanced backcross population between Oryza rufipogon and the Oryza sativa cultivar Jefferson. Theor Appl Genet 107:479-493
    • (2003) Theor Appl Genet , vol.107 , pp. 479-493
    • Thomson, M.1    Tai, T.2    McClung, A.3    Lai, X.4    Hinga, M.5    Lobos, K.6    Xu, Y.7    Martinez, C.8    McCouch, S.9
  • 48
    • 84884941885 scopus 로고    scopus 로고
    • Effects on the Different M odel of Panicle Yields and Yield Components of Distribution Pattern of Rice
    • Wang YB, Li W (2005) Effects on the Different M odel of Panicle Yields and Yield Components of Distribution Pattern of Rice. J Liaoning Agric Coll 7:6-8
    • (2005) J Liaoning Agric Coll , vol.7 , pp. 6-8
    • Wang, Y.B.1    Li, W.2
  • 49
    • 0029812754 scopus 로고    scopus 로고
    • Identification of QTLs affecting traits of agronomic importance in a recombinant inbred population derived from a subspecific rice cross
    • Xiao J, Li J, Yuan L, Tanksley S (1996) Identification of QTLs affecting traits of agronomic importance in a recombinant inbred population derived from a subspecific rice cross. Theor Appl Genet 92:230-244
    • (1996) Theor Appl Genet , vol.92 , pp. 230-244
    • Xiao, J.1    Li, J.2    Yuan, L.3    Tanksley, S.4
  • 50
    • 0034950935 scopus 로고    scopus 로고
    • Mapping Quantitative Trait Loci for Days-to-heading, and Culm, Panicle and Internode Lengths in a BC1F3 Population Using an Elite Rice Variety, Koshihikari, as the Recurrent Parent
    • Yamamoto T, Taguchi-Shiobara F, Ukai Y, Sasaki T, Yano M (2001) Mapping Quantitative Trait Loci for Days-to-heading, and Culm, Panicle and Internode Lengths in a BC1F3 Population Using an Elite Rice Variety, Koshihikari, as the Recurrent Parent. Breed Sci 51:63-71
    • (2001) Breed Sci , vol.51 , pp. 63-71
    • Yamamoto, T.1    Taguchi-Shiobara, F.2    Ukai, Y.3    Sasaki, T.4    Yano, M.5
  • 53
    • 0034486611 scopus 로고    scopus 로고
    • Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CONSTANS
    • Yano M, Katayose Y, Ashikari M, Yamanouchi U, Monna L, Fuse T, Baba T, Yamamoto K, Umehara Y, Nagamura Y (2000) Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CONSTANS. Plant Cell 12:2473-2483
    • (2000) Plant Cell , vol.12 , pp. 2473-2483
    • Yano, M.1    Katayose, Y.2    Ashikari, M.3    Yamanouchi, U.4    Monna, L.5    Fuse, T.6    Baba, T.7    Yamamoto, K.8    Umehara, Y.9    Nagamura, Y.10
  • 54
    • 0242330719 scopus 로고    scopus 로고
    • Analysis of additive and AE interaction effects of QTLs controlling plant height, heading date and panicle number in rice (Oryza sativa L.)
    • Yuan AP, Cao LY, Zhuang JY, Li RZ, Zheng KL, Zhu J, Cheng SH (2003) Analysis of additive and AE interaction effects of QTLs controlling plant height, heading date and panicle number in rice (Oryza sativa L.). J Genet Genomics 30:899-906
    • (2003) J Genet Genomics , vol.30 , pp. 899-906
    • Yuan, A.P.1    Cao, L.Y.2    Zhuang, J.Y.3    Li, R.Z.4    Zheng, K.L.5    Zhu, J.6    Cheng, S.H.7
  • 57
    • 67249153133 scopus 로고    scopus 로고
    • Additive Effects and Epistasis Effects of QTL for Plant Height and Its Components Using Single Segment Substitution Lines (SSSLs) in Rice
    • Zhao FM, Zhang GQ, Zeng RZ, Yang ZL, Zhu HT, Zhong BQ, Ling YH, He GH (2009) Additive Effects and Epistasis Effects of QTL for Plant Height and Its Components Using Single Segment Substitution Lines (SSSLs) in Rice. Acta Agronomica Sinica 35:48-56
    • (2009) Acta Agronomica Sinica , vol.35 , pp. 48-56
    • Zhao, F.M.1    Zhang, G.Q.2    Zeng, R.Z.3    Yang, Z.L.4    Zhu, H.T.5    Zhong, B.Q.6    Ling, Y.H.7    He, G.H.8
  • 58
    • 84884954342 scopus 로고    scopus 로고
    • QTL Analysis of Heading Date, Plant Height and Yield Components in F2 Population Derived from Minghui 86 × Jiafuzhan
    • Zheng JS, Jiang LR, Zeng JM, Lin WX, Li YZ (2003) QTL Analysis of Heading Date, Plant Height and Yield Components in F2 Population Derived from Minghui 86 × Jiafuzhan. Mol Plant Breed 1:633-639
    • (2003) Mol Plant Breed , vol.1 , pp. 633-639
    • Zheng, J.S.1    Jiang, L.R.2    Zeng, J.M.3    Lin, W.X.4    Li, Y.Z.5
  • 61
    • 0035348136 scopus 로고    scopus 로고
    • Comparison of the Detection of QTL for Yield Traits in Different Generations of a Rice Cross Using Two Mapping Approaches
    • Zhuang JY, Fan YY, Wu JL, Xia YW, Zheng KL (2001) Comparison of the Detection of QTL for Yield Traits in Different Generations of a Rice Cross Using Two Mapping Approaches. J Genet Genomics 28:458-464
    • (2001) J Genet Genomics , vol.28 , pp. 458-464
    • Zhuang, J.Y.1    Fan, Y.Y.2    Wu, J.L.3    Xia, Y.W.4    Zheng, K.L.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.