Assessment of diversity among populations of Rauvolfia serpentina Benth. Ex. Kurtz. from Southern Western Ghats of India, based on chemical profiling, horticultural traits and RAPD analysis

Fitoterapia

Volumn 92, Issue 1, 2014, Pages 46-60

  Nair, Vadakkemuriyil Divya ^a   Raj, Rajan Pillai Dinesh ^b   Panneerselvam, Rajaram ^a   Gopi, Ragupathi ^a  

^a ANNAMALAI UNIVERSITY   (India)

^b BISHOP MOORE COLLEGE   (India)

Author keywords

Biodiversity conservation; RAPD; Rauvolfia serpentina Benth. Ex. Kurtz.; Reserpine; Southern Western Ghats

Indexed keywords

ALKALOID DERIVATIVE; RESERPINE;

ACCURACY; ARTICLE; BREEDING; CONTROLLED STUDY; DRUG DETERMINATION; EVOLUTIONARY ADAPTATION; GENE FLOW; GENETIC VARIABILITY; GENOTYPE; GEOGRAPHIC DISTRIBUTION; GERMPLASM; HABITAT FRAGMENTATION; HORTICULTURE; INDIA; MEDICINAL PLANT; MOLECULAR PHYLOGENY; MORPHOLOGICAL TRAIT; NONHUMAN; PHYLOGENETIC TREE; POPULATION GENETIC STRUCTURE; PRINCIPAL COMPONENT ANALYSIS; PRIORITY JOURNAL; RANDOM AMPLIFIED POLYMORPHIC DNA; RAUVOLFIA SERPENTINA; RAUWOLFIA; STATISTICAL ANALYSIS;

RAUVOLFIA SERPENTINA;

BIODIVERSITY CONSERVATION; RAPD; RAUVOLFIA SERPENTINA BENTH. EX. KURTZ.; RESERPINE; SOUTHERN WESTERN GHATS;

GENOTYPE; INDIA; PHENOTYPE; POLYMORPHISM, GENETIC; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE; RAUWOLFIA;

EID: 84887286391     PISSN: 0367326X     EISSN: 18736971     Source Type: Journal    
DOI: 10.1016/j.fitote.2013.09.017     Document Type: Article

References (80)

1. J.E. Aagard, K.V. Krutovskii, and S.H. Strauss RAPDs and allozymes exhibit similar levels of diversity and differentiation among populations and races of Douglas-Fir Heredity 81 1998 69 78 (Pubitemid 28351538)
2. A.L. Abdel-Mawgood, A.M. Assaeed, and T.I. Al-Abdallatif Application of RAPD technique for the conservation of an isolated population of Capparis deciduas Alex J Agric Res 51 2006 171 177
3. M.G. Al-Saghir, H.I. Malkavi, and A. El-Oqlah Genetic diversity in Hordeum spontaneum of Northern Jordan (Ajloun area) as revealed by RAPD and AFLP markers Int J Bot 3 2007 172 178 (Pubitemid 47311887)
4. T.R. Allnutt, A.C. Newton, A. Premoli, and A. Lara Genetic variation in the threatened South American Pigerodendron uviferum (Cupressaceae), detected using RAPD markers Biol Conserv 114 2003 245 253 (Pubitemid 38065555)
5. A.A. Ansari Threatened medicinal plants from Madhaulia forest of Gorakhpur J Econ Taxon Bot 17 1993 241 248
6. Kaul Arun Kumar, M.K. Bhan, Punit K. Khanna, and K.A. Suri Morphological and chemical variation in 25 collections of the Indian medicinal plant, Withania somnifera (L.) Duel (Solanaceae) Genet Resour Crop Evol 54 2007 655 660 (Pubitemid 46570772)
7. G. Bechly Glossary of phylogenetic systematic with a critic of mainstream cladism 2000 Pergamon Press New York
8. J. Bernath Some scientific and practical aspects of production and utilization of oregano in central Europe. Oregano Proceedings of the IPGRI Int.Workshop on Oregano May 8-12 1996 76 93 [Bari]
9. J. Bernath Strategies and recent achievements in selection of medicinal and aromatic plants J. Bernath, Proc. Int. Conf. on MAP Acta Hort. 576 2002 ISHS
10. M. Bleuler, and W.A. Stoll Clinical use of reserpine in psychiatry: comparison with chlorpromazine Ann N Y Acad Sci 61 1955 167 173
11. D.S. Brar, and G.S. Khush Transferring genes from wild species into rice M.S. Kang, Quantitative genetics, genomics and plant breeding 2002 CAB International Wallingford 197 217
12. H.L. Carson Increased genetic variance after a population bottleneck Trends Ecol Evol 5 1990 228 230 (Pubitemid 120036296)
13. M. Coleman, and R.J. Abbott Possible causes of morphological variation in an endemic Moroccan groundsel (Senecio leucanthemifolius var. casablancae): evidence from chloroplast DNA and random amplified polymorphic DNA markers Mol Ecol 12 2003 423 434 (Pubitemid 36144721)
14. Y.Q.H. Deborah, A.J. Lau, C.L. Yeo, X.K. Liu, C.R. Yang, and H.L. Koh Genetic diversity and variation of saponin contents in Panax notoginseng roots from a single farm J Agric Food Chem 53 2005 8460 8467 (Pubitemid 41608900)
15. D.K. Dharmar, and A.J.D. Britto RAPD analysis of genetic variability in wild populations of Withania somnifera (L.) dunal Int J Biol Technol 2 2011 21 25
16. M.R. Dubash, and C.B. Fenster Inbreeding and outbreeding depression in fragmented populations A.G. Young, G.M. Clarke, Genetics, demography and viability of fragmented population 2000 Cambridge University Press Cambridge 35 53
17. N.C. Ellstrand, and D.R. Elam Population genetic consequences of small population size: implications for plant conservation Ann Rev Ecol Evol Syst 24 1993 217 242
18. L. Excoffier, P.E. Smouse, and J.M. Quattro Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data Genetics 131 1992 479 491
19. D.S. Falconer Introduction to quantitative genetics 1964 Oliver & Boyd Edinbourgh/London
20. J. Felsenstein PHYLIP (phylogeny inference package) version 3.5c 1993 Department of Genetics, University of Washington Seattle
21. B.B. Gajera, N. Kumar, A.S. Singh, B.S. Punvar, R. Ravikiran, and N. Subhash Assessment of genetic diversity in castor (Ricinus communis L.) using RAPD and ISSR markers Ind Crop Prod 32 2010 491 498
22. S. Gan, J. Shi, M. Li, J. Wu, and J. Bai Moderate density molecular maps of Eucalyptus urophylla S.T. Blake and E. tereticornis Smith genomes based on RAPD markers Genetica 118 2003 59 67 (Pubitemid 36463372)
23. M. Gaudeul, P. Taberlet, and I. Till-Bottraud Genetic diversity in an endangered alpine plant, Eryngium alpinum L. (Apiaceae), inferred from amplified fragment length polymorphism markers Mol Ecol 9 2000 1625 1937
24. A.C. Gillies, C. Navarro, A.J. Lowe, A.C. Newton, M. Hernandez, and J. Wilson Genetic diversity in meso-American populations of mahogany (Swietenia macrophylla) assessed using RAPDs Heredity 83 1999 722 732 (Pubitemid 30044776)
25. I. Hammad, and S.H. Qari Genetic diversity among Zygophyllum (Zygophyllaceae) populations based on RAPD analysis Genet Mol Res 9 2010 2412 2420
26. J.L. Hamrick, and M.J.W. Godt Conservation genetics of endemic plant species J.C. Avise, J.L. Hamrick, Conservation genetics: case histories from nature 1996 Chapman and Hall New York 281 304
27. J.L. Hamrick, and M.J.W. Godt Effects of life history traits on genetic diversity in plant species Philos Trans R Soc Lond B 35 1996 1291 1298
28. T. Han, Y. Hu, S.Y. Zhou, H.L. Li, Q.Y. Zhang, and H. Zhang Correlation between the genetic diversity and variation of total phenolic acids contents in Fructus xanthii from different populations in China Biomed Chromatogr 22 2008 478 486 (Pubitemid 351722146)
29. R.K.M. Hay, and P.G. Waterman Volatile oil crops: their biology, biochemistry, and production 1993 Longman Scientific & Technical John Wiley (185 pp.)
30. M. Heuertz, J.F. Hausman, I. Tsvetkov, Lacoste N. Frascaria, and X. Vekemans Assessment of genetic structure within and among Bulgarian populations of the common ash (Fraxinus excelsior L.) Mol Ecol 10 2001 1615 1623 (Pubitemid 32667719)
31. X.J. Hu, H.P. He, H. Zhou, Y.T. Di, X.W. Yang, and X.J. Hao New indole alkaloids from Rauvolfia verticillatae Helv Chim Acta 89 2008 1344 1350
32. H. Jacquemyn, O. Honnay, P. Galbusera, and I. Roldan Ruiz Genetic structure of the forest herb Primula elatior in a changing landscape Mol Ecol. 13 2004 Blackwell publishing Ltd. 211 219 (Pubitemid 38106486)
33. S.N. Jadhav, K.N. Reddy, and C.S. Reddy Conservation assessment and management planning for the medicinal plants of Andhra Pradesh 2001 Medicinal plants Conservation Centre (MPCC)andFRLHT Hyderabad, India 1 39
34. S. Kanak, and K.R. Krishna Seed sterility in Rauvolfia serpentina: an endangered medicinal plant J Herbs Spices Med Plants 15 2009 248 252
35. J.L. Karihaloo, Y.K. Dwivedi, S. Archak, and A. Baldev Gaikwad Analysis of Indian mango cultivars using RAPD markers J Hortic Sci Biotechnol 78 2003 285 289 (Pubitemid 36599718)
36. J.D. Karron Patterns of genetic variation and breeding systems in rare plant species D.A. Falk, K.E. Holsinger, Genetics and conservation of rare plants 1991 Oxford University Press New York, NY 87 98
37. A. Katsiotis, N. Nikoloudakis, A. Linos, A. Drossou, and T. Constantinidis Phylogenetic relationships in Origanum spp. based on rDNA sequences and intra-genetic variation of Greek O. vulgare subsp. hirtum revealed by RAPD Sci Hortic 121 2009 103 108
38. M. Kimura, and J.F. Craw The number of alleles that can be maintained in a finite population Genetics 49 1964 725 738
39. V.E. Klyushnichenko, S.A. Yakimov, T.P. Tuzova, Ya V. Syagailo, I.N. Kuzovkina, and A.N. Wulfson Determination of indole alkaloids from R. serpentina and R. vomitoria by high performance liquid chromatography and high performance thin layer chromatography J Chromatogr A 704 1995 357 362
40. R. Kölliker, F.J. Stadelmann, B. Reidy, and J. Nösberger Fertilization and defoliation frequency affect genetic diversity of Festuca pratensis Huds. in permanent grasslands Mol Ecol 7 1998 1557 1567 (Pubitemid 28504072)
41. R.H. Kuddus, N.N. Kuddus, and R.W. Dvorchik DNA polymorphism in the living fossil Ginko biloba from Eastern United States Genome 45 2002 8 12 (Pubitemid 34190665)
42. C. Kuroda, K. Kiuchi, A. Torihata, K. Takeshita, X. Gong, and Y. Shen Chemical and genetic diversity of Ligularia latihastata and Ligularia villosa in Yunnan Province of China Chem Biodivers 4 2007 2210 2217 (Pubitemid 47527672)
43. E. Laguna, M.B. Crespo, G. Mateo, S. Lopez, C. Fabregat, and L. Serra Flora Endémica Rara o Amenazada de la Comunidad Valenciana 1998 Generalitat Valenciana Valencia 443
44. R.C. Lewinton The apportionment of human diversity Evol Biol 6 1972 381 398
45. P.O. Lewis, and D.J. Crawford Pleistocene refugium endemics exhibit greater allozymic diversity than widespread congeners in the genus Polygonella (Polygonaceae) Am J Bot 82 1995 141 149
46. K.H. Lin, Y.C. Lai, H.C. Li, S.F. Lo, L.F.O. Chen, and H.F. Lo Genetic variation and its relationship to root weight in the sweet potato as revealed by RAPD analysis Sci Hortic 120 2009 2 7
47. Z. Lippman, and S.D. Tanksley Dissecting the genetic pathway to extreme fruit size in tomato using a cross between the small-fruited wild species. Lycopersicon piminellifolium and L.esculentum var. Giant Heirloom Genetics 158 2001 413 422 (Pubitemid 32428661)
48. F. Lopez-Munoz, V.S. Bhatara, C. Alamo, and E. Cuenca Historical approach to reserpine discovery and its introduction in psychiatry Actas Esp Psiquiatr 32 6 2004 387 395 (Pubitemid 39643686)
49. J.M. McDermott, and B.A. McDonald Gene flow in plant pathosystems Annu Rev Phytopathol 31 1993 353 373 (Pubitemid 2001600)
50. S.G. Nebauer, L. del Castillo-Agudo, and J. Segura RAPD variation within and among natural populations of outcrossing willow-leaved foxglove (Digitalis obscura L.) Theor Appl Genet 98 1999 985 994 (Pubitemid 29245225)
51. M. Nei Genetic distance between populations Am Nat 106 1972 283 292
52. M. Nei Analysis of gene diversity in subdivided populations Proc Natl Acad Sci U S A 70 1973 3321 3323
53. H. Nybom, and I.V. Bartish Effects of life history traits and sampling strategies on genetic diversity estimates obtained with RAPD markers in plants Perspect Plant Ecol Evol Syst 3 2000 93 114 (Pubitemid 32122223)
54. J.G.B. Oostermeijer, S.H. Luijten, and J.C.M. den Nijs Integrating demographic and genetic approaches in plant conservation Biol Conserv 113 2003 389 398 (Pubitemid 36990608)
55. E.D. Owuor, T. Fahima, A. Beiles, A. Korol, and E. Nevo Population genetic response to microsite ecological stress in wild barley, Hordeum spontaneum Mol Ecol 6 1997 1177 1187 (Pubitemid 28012435)
56. M. Pfenninger, E. Vela, R. Jesse, M.A. Elejalde, F. Liberto, and F. Magnin Temporal speciation pattern in the western Mediterranean genus Tudorella P. Fischer 1885 (Gastropoda, Pomatiidae) supports the Tyrrhenian vicariance hypothesis Mol Phylogenet Evol 54 2010 427 436
57. C.R. Rao Advanced statistical methods in biomedical research 1952 John Wiley and Sons. Inc. New York 390
58. G.R. Rout, D. Bhatacharya, R.M. Nanda, S. Nayak, and P. Das Evaluation of genetic relationships in Dalbergia species using RAPD markers Biodivers Conserv 12 2003 197 206 (Pubitemid 36178237)
59. M.A. Saghai-Maroof, K. Soliman, R.A. Jorgensen, and R.W. Allard Ribosomal DNA spacer length polymorphisms in barley: Mendelian inheritance chromodomal location and population dynamics Proc Natl Acad Sci 81 1984 8014 8018
60. J. Sambrook, E.F. Frisch, and T. Maniatis Molecular cloning: a laboratory manual 1989 Cold Spring Harbour Press Cold Spring Harbor, New York
61. B.A. Schaalet, D.A. Hayworth, K.M. Olsen, J.T. Rauscher, and W.A. Smith Phylogeographic studies in plants: problems and prospects Mol Ecol 7 1998 465 474 (Pubitemid 28226693)
62. A.K. Shasany, M.P. Darokar, D. Saikia, S. Rajkumar, V. Sundaresan, and S.P.S. Khanuja Genetic diversity and species relationship in Asparagus spp. using RAPD analysis J Med Aromat Plant Sci 25 3 2003 698 704
63. W.B. Sherwin, and C. Moritz Managing and monitoring genetic erosion A.G. Young, G.M. Clarke, Genetics, demography and viability of fragmented populations 2000 Cambridge University Press Cambridge 9 34
64. M.K. Shrestha, A. Golan-Goldhirsh, and D. Ward Population genetic structure and the conservation of isolated populations of Acacia raddiana in the Negev Desert Biol Conserv 108 2002 119 127
65. P.K. Singh, V. Kumar, R.K. Tiwari, A. Sharma, C.V. Rao, and R.H. Singh Medico-ethnobotanical study Indian J Tradit Knowl 7 2010 365 370
66. M. Slatkin, and N.H. Barton A comparison of three indirect methods for estimating average levels of gene flow Evolution 43 1989 1349 1368
67. V.B. Sreekumar, C. Renuka, T.B. Suma, and M. Balasundaran Taxonomic reconsideration of Calamus rivalis Thw. ex Trim. and C. metzianus Schlecht (Arecaceae) through morphometric and molecular analyses Bot Stud 47 2006 443 452 (Pubitemid 44826341)
68. G. Su, Y. Huang, F. Tan, X. Ni, and T. Tang Conservation genetics of Lumnitzera littorea (Combretaceae), an endangered mangrove, from the Indo-West Pacific Mar Biol 150 2007 321 328 (Pubitemid 44951245)
69. Y. Su, T. Wang, and F. Deng Contrasting genetic variation and differentiation on Hainan Island and the Chinese mainland populations of Dacrycarpus imbricatus (Podocarpaceae) Biochem Syst Ecol 38 2010 576 584
70. S. Sukumaran, and A.D.S. Raj Rare and endemic plants in the sacred groves of Kanyakumari district in Tamil Nadu Indian J For 31 2008 611 616
71. J.D. Thompson, M. Tarayre, P. Gauthier, and Y.B. Litrico Linhart Multiple genetic contributions to plant performance in Thymus vulgaris J Ecol 92 2004 45 56 (Pubitemid 38143412)
72. J.D. Thompson Phenotypic plasticity as a component of evolutionary change Trends Ecol Evol 6 1991 246 249 (Pubitemid 121002985)
73. T.K. Vanhala, C.P.E. Van Rijin, J. Buntjer, P. Sam, E. Nevo, and H. Poorter Environmental, phenotypic and genetic variation of wild barley (Hordeum spontaneum) from Israel Euphytica 137 2004 297 304
74. L.E. Wallace Examining the effects of fragmentation on genetic variation in Platanthera leucophaea (Orchidaceae): inferences from allozyme and random amplified polymorphic DNA markers Plant Spec Biol 17 2002 37 49 (Pubitemid 34979182)
75. J. Wang, X. Yuan, Z. Jin, Y. Tian, and H. Song Free radical and reactive oxygen species scavenging activities of peanut skins extract Food Chem 104 2007 242 250 (Pubitemid 46561122)
76. W. Wang, L. Chen, P. Yang, L. Hou, C. He, and Z. Gu Assessing genetic diversity of populations of top mouth culter (Culter alburns) in China using AFLP markers Biochem Syst Ecol 35 2007 662 669 (Pubitemid 47211601)
77. R.F. Weiss, and V. Fintlemann Herbal medicine 2nd ed. 2000 Thieme Stuttgart/New York
78. J.G.K. Williams, A.R. Kubelik, K.J. Livak, J.A. Rafaleski, and S.V. Tingey DNA polymorphisms amplified by arbitrary primers are useful as genetic markers Nucleic Acid Res 18 1990 6531 6535 (Pubitemid 20386578)
79. F.C. Yeh, R.C. Yang, and T. Boyle POPGENE 32-version 1.31. Population Genetics Software http.//www.ualberta.ca/~fyeh/fyeh/ 1999
80. X. Zha, J. Luo, J. Wang, Z. Wei, and S. Jiang Genetic characterization of the nine medicinal Dendrobium species using RAPD Afr J Biotechnol 8 2009 2064 2068 [rious populations of R. serpentina]