FTIR and Raman studies of structure and bonding in mineral and organic-mineral composites

Methods in Enzymology

Volumn 532, Issue , 2013, Pages 533-556

  Tao, Jinhui ^a  

^a PACIFIC NORTHWEST NATIONAL LABORATORY   (United States)

Author keywords

amorphous calcium carbonate (ACC); amorphous calcium phosphate (ACP); biomineralization; calcium biominerals; crustacean; FTIR; phase transformation; Raman

Indexed keywords

CALCIUM PHOSPHATE;

ABSORPTION; ARMADILLIDIUM VULGARE; ARTICLE; BIOMINERALIZATION; CRYSTALLIZATION; DIPOLE; INFRARED RADIATION; INFRARED SPECTROSCOPY; PRIORITY JOURNAL; RAMAN SPECTROMETRY; SOLID; SYNTHESIS; VIBRATION;

CRUSTACEA;

AMORPHOUS CALCIUM CARBONATE (ACC); AMORPHOUS CALCIUM PHOSPHATE (ACP); BIOMINERALIZATION; CALCIUM BIOMINERALS; CRUSTACEAN; FTIR; PHASE TRANSFORMATION; RAMAN;

ALGORITHMS; ANIMALS; BIOMIMETIC MATERIALS; CALCIUM CARBONATE; CALCIUM PHOSPHATES; CRYSTALLIZATION; INFRARED RAYS; PHASE TRANSITION; SPECTROSCOPY, FOURIER TRANSFORM INFRARED; SPECTRUM ANALYSIS, RAMAN;

EID: 84887245393     PISSN: 00766879     EISSN: 15577988     Source Type: Book Series    
DOI: 10.1016/B978-0-12-416617-2.00022-9     Document Type: Chapter

References (59)

1. L. Addadi, S. Raz, and S. Weiner Taking advantage of disorder: Amorphous calcium carbonate and its roles in biomineralization Advanced Materials 15 2003 959 970
2. S. Amarie, P. Zaslansky, Y. Kajihara, E. Griesshaber, W.W. Schmahl, and F. Keilmann Nano-FTIR chemical mapping of minerals in biological materials Beilstein Journal of Nanotechnology 3 2012 312 323
3. J.L. Arias, and M.S. Fernández Polysaccharides and proteoglycans in calcium carbonate-based biomineralization Chemical Reviews 108 11 2008 4475 4482
4. W. Bao, M. Melli, N. Caselli, F. Riboli, D.S. Wiersma, and M. Staffaroni Mapping local charge recombination heterogeneity by multidimensional nanospectroscopic imaging Science 338 2012 1317 1321
5. A. Barth, and C. Zscherp What vibrations tell us about proteins Quarterly Reviews of Biophysics 35 2002 369 430 (Pubitemid 36207229)
6. E. Beniash, J. Aizenberg, L. Addadi, and S. Weiner Amorphous calcium carbonate transforms into calcite during sea urchin larval spicule growth Proceedings of the Royal Society of London B 264 1997 461 465 (Pubitemid 27144056)
7. E.E. Berry, and C.B. Baddiel The infra-red spectrum of dicalcium phosphate dihydrate (brushite) Spectrochimica Acta 23A 1967 2089 2097
8. A.L. Boskey Biomineralization: Conflicts, challenges, and opportunities Journal of Cellular Biochemistry. Supplement 30-31 1998 83 91 (Pubitemid 29028729)
9. E. Brunner, H. Ehrlich, P. Schupp, R. Hedrich, S. Hunoldt, and M. Kammer Chitin-based scaffolds are an integral part of the skeleton of the marine demosponge Ianthella basta Journal of Structural Biology 168 2009 539 547
10. E.E. Coleyshaw, G. Crump, and W.P. Griffith Vibrational spectra of the hydrated carbonate minerals ikaite, monohydrocalcite, lansfordite and nesquehonite Spectrochimica Acta Part A 59 2003 2231 2239
11. H. Cölfen, and S. Mann Higher-order organization by mesoscale self-assembly and transformation of hybrid nanostructures Angewandte Chemie, International Edition 42 2003 2350 2365 (Pubitemid 36735542)
12. J.D. Curry, and A.J. Kohn Fracture in the crossed-lamellar structure of Conus shells Journal of Materials Science 11 1976 1615 1623
13. J.J. De Yoreo Crystal nucleation: More than one pathway Nature Materials 12 2013 284 285
14. J.J. De Yoreo, and P.G. Vekilov Principles of crystal nucleation and growth Reviews in Mineralogy and Geochemistry 54 2003 57 93
15. H. Ehrlich, M. Maldonado, K.D. Spindler, C. Eckert, T. Hanke, and R. Born First evidence of chitin as a component of the skeletal fibers of marine sponges. Part I. Verongidae (demospongia: Porifera) The Journal of Experimental Zoology 308B 2007 347 356 (Pubitemid 47235346)
16. S. Elhadj, J.J. De Yoreo, J.R. Hoyer, and P.M. Dove Role of molecular charge and hydrophilicity in regulating the kinetics of crystal growth Proceedings of the National Academy of Sciences of the United States of America 103 2006 19237 19242 (Pubitemid 46026017)
17. M. Faatz, F. Gröhn, and G. Wegner Amorphous calcium carbonate: Synthesis and potential intermediate in biomineralization Advanced Materials 16 2004 996 1000
18. B.O. Fowler, M. Marković, and W.E. Brown Octacalcium phosphate. 3. Infrared and Raman vibrational spectra Chemistry of Materials 5 1993 1417 1423
19. M.J. Glimcher Bone: Nature of the calcium phosphate crystals and cellular, structural, and physical chemical mechanisms in their formation Reviews in Mineralogy and Geochemistry 64 2006 223 282
20. G. Gouadec, and P. Colomban Raman Spectroscopy of nanomaterials: How spectra relate to disorder, particle size and mechanical properties Progress in Crystal Growth and Characterization of Materials 53 2007 1 56 (Pubitemid 46437303)
21. M.D. Grynpas, L.C. Bonar, and M.J. Glimcher Failure to detect an amorphous calcium-phosphate solid phase in bone mineral: A radial distribution function study Calcified Tissue International 36 1984 291 302
22. R. Gueta, A. Natan, L. Addadi, S. Weiner, K. Refson, and L. Kronik Local atomic order and infrared spectra of biogenic calcite Angewandte Chemie, International Edition 46 2007 291 294 (Pubitemid 46071720)
23. W.J.E.M. Habraken, J. Tao, L.J. Brylka, H. Friedrich, L. Bertinetti, and A.S. Schenk Ion-association complexes unite classical and non-classical theories for the biomimetic nucleation of calcium phosphate Nature Communications 4 2013 1507
24. G. Herzberg Molecular spectra and molecular structure II. Infrared and Raman spectra of polyatomic molecules 1945 D. Van Nostrand Company, Inc. New York
25. S. Hild, O. Marti, and A. Ziegler Spatial distribution of calcite and amorphous calcium carbonate in the cuticle of the terrestrial crustaceans Porcellio scaber and Armadillidium vulgare Journal of Structural Biology 163 2008 100 108
26. 2) Spectroscopy Letters: An International Journal for Rapid Communication 31 1998 1619 1634 (Pubitemid 128521570)
27. C. Kittel Introduction to solid state physics 7th ed. 1996 John Wiley and Sons New York
28. M. Klähn, G. Mathias, C. Kötting, M. Nonella, J. Schlitter, and K. Gerwert IR spectra of phosphate ions in aqueous solution: Predictions of a DFT/MM approach compared with observations The Journal of Physical Chemistry. A 108 2004 6186 6194
29. S. Koutsopoulos Synthesis and characterization of hydroxyapatite crystals: A review study on the analytical methods Journal of Biomedical Materials Research 62 2002 600 612
30. R.Z. LeGeros Calcium phosphate-based osteoinductive materials Chemical Reviews 108 2008 4742 4753
31. I.R. Lewis, and H.G.M. Edwards Handbook of Raman spectroscopy: From the research laboratory to the process line 2001 Marcel Dekker Inc. New York
32. O.V. Lindqvist, I. Salminen, and P.W. Winston Water content and water activity in the cuticle of terrestrial isopods The Journal of Experimental Biology 56 1972 49 55
33. D.A. Long Raman spectroscopy 1977 McGraw-Hill New York
34. H.A. Lowenstam, and S. Weiner Transformation of amorphous calcium phosphate to crystalline dahllite in the radular teeth of chitons Science 227 1985 51 53 (Pubitemid 17255282)
35. J. Mahamid, A. Sharir, L. Addadi, and S. Weiner Amorphous calcium phosphate is a major component of the forming fin bones of zebrafish: Indications for an amorphous precursor phase Proceedings of the National Academy of Sciences of the United States of America 105 2008 12748 12753
36. S. Mann Molecular recognition in biomineralization Nature 332 1988 119 124 (Pubitemid 18083557)
37. F. Nudelman, K. Pieterse, A. George, P.H. Bomans, H. Friedrich, and L.J. Brylka The role of collagen in bone apatite formation in the presence of hydroxyapatite nucleation inhibitors Nature Materials 9 2010 1004 1009
38. L.C. Palmer, C.J. Newcomb, S.R. Kaltz, E.D. Spoerke, and S.I. Stupp Biomimetic systems for hydroxyapatite mineralization inspired by bone and enamel Chemical Reviews 108 11 2008 4754 4783
39. Y. Politi, T. Arad, E. Klein, S. Weiner, and L. Addadi Sea urchin spine calcite forms via a transient amorphous calcium carbonate phase Science 306 2004 1161 1164 (Pubitemid 39489925)
40. Y. Politi, R.A. Metzler, M. Abrecht, B. Gilbert, F.H. Wilt, and I. Sagi Transformation mechanism of amorphous calcium carbonate into calcite in the sea urchin larval spicule Proceedings of the National Academy of Sciences of the United States of America 105 2008 17362 17366
41. M. Sarikaya Biomimetics: Materials fabrication through biology Proceedings of the National Academy of Sciences of the United States of America 96 25 1999 14183 14185 (Pubitemid 30000617)
42. G.R. Sauer, and R.E. Wuthier Fourier transform infrared characterization of mineral phases formed during induction of mineralization by collagenase-released matrix vesicles in vitro The Journal of Biological Chemistry 263 17 1988 13718 13724
43. P.J. Schuck, A. Weber-Bargioni, P.D. Ashby, D.F. Ogletree, A. Schwartzberg, and S. Cabrini Life beyond diffraction: Opening new routes to materials characterization with next-generation optical near-field approaches Advanced Functional Materials 23 2013 2539 2553
44. A. Sigel, H. Sigel, and R.K.O. Sigel Biomineralization: From nature to application Metal ions in life sciences Vol. 4 2008 Wiley 978-0-470-03525-2
45. C. Su, and D.L. Suarez In situ infrared speciation of adsorbed carbonate on aluminum and iron oxides Clays and Clay Minerals 45 1997 814 825
46. J. Tao, D. Zhou, Z. Zhang, X. Xu, and R. Tang Magnesium-aspartate-based crystallization switch inspired from shell molt of crustacean Proceedings of the National Academy of Sciences of the United States of America 106 52 2009 22096 22101
47. M.G. Taylor, K. Simkiss, S.F. Parker, and P.C.H. Mitchell Inelastic neutron scattering studies of synthetic calcium phosphates Physical Chemistry Chemical Physics 1 1999 3141 3144
48. J.D. Termine, and D.R. Lundy Vibrational spectra of some phosphate salts amorphous to X-ray diffraction Calcified Tissue Research 15 1974 55 70
49. J.D. Termine, and A.S. Posner Infra-red Determination of the percentage of crystallinity in apatitic calcium phosphates Nature 211 1966 268 270
50. N.V. Vagenas, A. Gatsouli, and C.G. Kontoyannis Quantitative analysis of synthetic calcium carbonate polymorphs using FT-IR spectroscopy Talanta 59 2003 831 836
51. A. Veis Mineralization in organic matrix frameworks Reviews in Mineralogy and Geochemistry 54 2003 249 290
52. D. Wang, A.F. Wallace, J.J. De Yoreo, and P.M. Dove Carboxylated molecules regulate magnesium content of amorphous calcium carbonates during calcification Proceedings of the National Academy of Sciences of the United States of America 106 2009 21511 21516
53. A. Weber-Bargioni, A. Schwartzberg, M. Cornaglia, A. Ismach, J.J. Urban, and Y. Pang Hyperspectral nanoscale imaging on dielectric substrates with coaxial optical antenna scan probes Nano Letters 11 2011 1201 1207
54. S. Weiner, and O. Bar-Yosef States of preservation of bones from prehistoric sites in the Near East: A survey Journal of Archaeological Science 17 1990 187 196
55. S. Weiner, and H.A. Lowenstam On biomineralization 1989 Oxford University Press Oxford 0-19-504977-2
56. I.M. Weiss, N. Tuross, L. Addadi, and S. Weiner Mollusc larval shell formation: Amorphous calcium carbonate is a precursor phase for aragonite The Journal of Experimental Zoology 293 2002 478 491 (Pubitemid 35036587)
57. X. Xu, A. Cai, R. Liu, H. Pan, R. Tang, and K. Cho The roles of water and polyelectrolytes in the phase transformation of amorphous calcium carbonate Journal of Crystal Growth 310 2008 3779 3787
58. K. Zhang, A. Geissler, S. Fischer, E. Brendler, and E. Bäucker Solid-state spectroscopic characterization of α-chitins deacetylated in homogeneous solutions The Journal of Physical Chemistry. B 116 2012 4584 4592
59. A. Ziegler, H. Fabritius, and M. Hagedorn Microscopical and functional aspects of calcium-transport and deposition in terrestrial isopods Micron 36 2005 137 153 (Pubitemid 40033984)