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Volumn 13, Issue 6, 2013, Pages 871-880

Interactions between peptidyl tRNA hydrolase homologs and the ribosomal release factor Mrf1 in S. pombe mitochondria

Author keywords

Fission yeast; Mitochondria; Mitochondrial ribosome tagging; Peptidyl tRNA hydrolase; Release factor; Translation

Indexed keywords

MITOCHONDRIAL PROTEIN; MRF1 PROTEIN; PEPTIDYL TRANSFERASE RNA HYDROLASE; PTH3 PROTEIN; PTH4 PROTEIN; UNCLASSIFIED DRUG;

EID: 84887076454     PISSN: 15677249     EISSN: 18728278     Source Type: Journal    
DOI: 10.1016/j.mito.2013.07.115     Document Type: Article
Times cited : (12)

References (51)
  • 2
    • 0029893328 scopus 로고    scopus 로고
    • Cloning by functional complementation, and inactivation, of the Schizosaccharomyces pombe homologue of the Saccharomyces cerevisiae gene ABC1
    • Bonnefoy N., Kermorgant M., Brivet-Chevillotte P., Dujardin G. Cloning by functional complementation, and inactivation, of the Schizosaccharomyces pombe homologue of the Saccharomyces cerevisiae gene ABC1. Mol. Gen. Genet. 1996, 251:204-210.
    • (1996) Mol. Gen. Genet. , vol.251 , pp. 204-210
    • Bonnefoy, N.1    Kermorgant, M.2    Brivet-Chevillotte, P.3    Dujardin, G.4
  • 3
    • 0034095405 scopus 로고    scopus 로고
    • The respiratory gene OXA1 has two fission yeast orthologues which together encode a function essential for cellular viability
    • Bonnefoy N., Kermorgant M., Groudinsky O., Dujardin G. The respiratory gene OXA1 has two fission yeast orthologues which together encode a function essential for cellular viability. Mol. Microbiol. 2000, 35:1135-1145.
    • (2000) Mol. Microbiol. , vol.35 , pp. 1135-1145
    • Bonnefoy, N.1    Kermorgant, M.2    Groudinsky, O.3    Dujardin, G.4
  • 4
    • 0014993591 scopus 로고
    • Peptidyl-tRNA hydrolase: demonstration in various organisms. Enzymatic activity in the presence of ribosomes
    • Brun G., Paulin D., Yot P., Chapeville F. Peptidyl-tRNA hydrolase: demonstration in various organisms. Enzymatic activity in the presence of ribosomes. Biochimie 1971, 53:225-231.
    • (1971) Biochimie , vol.53 , pp. 225-231
    • Brun, G.1    Paulin, D.2    Yot, P.3    Chapeville, F.4
  • 5
    • 0000700986 scopus 로고
    • Lethality of the petite mutation in petite negative yeasts
    • Bulder C.J. Lethality of the petite mutation in petite negative yeasts. Antonie Leeuwenhoek 1964, 30:442-454.
    • (1964) Antonie Leeuwenhoek , vol.30 , pp. 442-454
    • Bulder, C.J.1
  • 6
    • 79955008757 scopus 로고    scopus 로고
    • Escherichia coli YaeJ protein mediates a novel ribosome-rescue pathway distinct from SsrA- and ArfA-mediated pathways
    • Chadani Y., Ono K., Kutsukake K., Abo T. Escherichia coli YaeJ protein mediates a novel ribosome-rescue pathway distinct from SsrA- and ArfA-mediated pathways. Mol. Microbiol. 2011, 80:772-785.
    • (2011) Mol. Microbiol. , vol.80 , pp. 772-785
    • Chadani, Y.1    Ono, K.2    Kutsukake, K.3    Abo, T.4
  • 7
    • 84867044295 scopus 로고    scopus 로고
    • ArfA recruits release factor 2 to rescue stalled ribosomes by peptidyl-tRNA hydrolysis in Escherichia coli
    • Chadani Y., Ito K., Kutsukake K., Abo T. ArfA recruits release factor 2 to rescue stalled ribosomes by peptidyl-tRNA hydrolysis in Escherichia coli. Mol. Microbiol. 2012, 86:37-50.
    • (2012) Mol. Microbiol. , vol.86 , pp. 37-50
    • Chadani, Y.1    Ito, K.2    Kutsukake, K.3    Abo, T.4
  • 8
    • 18844428621 scopus 로고    scopus 로고
    • Mitochondrial translation: elongation factor Tu is essential in fission yeast and depends on an exchange factor conserved in humans but not in budding yeast
    • Chiron S., Suleau A., Bonnefoy N. Mitochondrial translation: elongation factor Tu is essential in fission yeast and depends on an exchange factor conserved in humans but not in budding yeast. Genetics 2005, 169:1891-1901.
    • (2005) Genetics , vol.169 , pp. 1891-1901
    • Chiron, S.1    Suleau, A.2    Bonnefoy, N.3
  • 11
    • 0034122608 scopus 로고    scopus 로고
    • Maintenance and integrity of the mitochondrial genome: a plethora of nuclear genes in the budding yeast
    • Contamine V., Picard M. Maintenance and integrity of the mitochondrial genome: a plethora of nuclear genes in the budding yeast. Microbiol. Mol. Biol. Rev. 2000, 64:281-315.
    • (2000) Microbiol. Mol. Biol. Rev. , vol.64 , pp. 281-315
    • Contamine, V.1    Picard, M.2
  • 12
    • 79953688726 scopus 로고    scopus 로고
    • The highly conserved eukaryotic DRG factors are required for efficient translation in a manner redundant with the putative RNA helicase Slh1
    • Daugeron M.C., Prouteau M., Lacroute F., Seraphin B. The highly conserved eukaryotic DRG factors are required for efficient translation in a manner redundant with the putative RNA helicase Slh1. Nucleic Acids Res. 2011, 39:2221-2233.
    • (2011) Nucleic Acids Res. , vol.39 , pp. 2221-2233
    • Daugeron, M.C.1    Prouteau, M.2    Lacroute, F.3    Seraphin, B.4
  • 13
    • 0020520741 scopus 로고
    • Expression of cloned mitochondrial DNA from the petite negative yeast Schizosaccharomyces pombe in E. coli minicells
    • Del Giudice L., Wolf K., Manna F., Massardo D.R. Expression of cloned mitochondrial DNA from the petite negative yeast Schizosaccharomyces pombe in E. coli minicells. Mol. Gen. Genet. 1983, 191:91-98.
    • (1983) Mol. Gen. Genet. , vol.191 , pp. 91-98
    • Del Giudice, L.1    Wolf, K.2    Manna, F.3    Massardo, D.R.4
  • 14
    • 84864322378 scopus 로고    scopus 로고
    • Mechanism of transcription initiation by the yeast mitochondrial RNA polymerase
    • Deshpande A.P., Patel S.S. Mechanism of transcription initiation by the yeast mitochondrial RNA polymerase. Biochim. Biophys. Acta 2012, 1819:930-938.
    • (2012) Biochim. Biophys. Acta , vol.1819 , pp. 930-938
    • Deshpande, A.P.1    Patel, S.S.2
  • 15
    • 84867817961 scopus 로고    scopus 로고
    • Evolution and diversification of the organellar release factor family
    • Duarte I., Nabuurs S.B., Magno R., Huynen M. Evolution and diversification of the organellar release factor family. Mol. Biol. Evol. 2012, 29:3497-3512.
    • (2012) Mol. Biol. Evol. , vol.29 , pp. 3497-3512
    • Duarte, I.1    Nabuurs, S.B.2    Magno, R.3    Huynen, M.4
  • 16
    • 0242526047 scopus 로고    scopus 로고
    • Common evolutionary origin of mitochondrial and rickettsial respiratory chains
    • Emelyanov V.V. Common evolutionary origin of mitochondrial and rickettsial respiratory chains. Arch. Biochem. Biophys. 2003, 420:130-141.
    • (2003) Arch. Biochem. Biophys. , vol.420 , pp. 130-141
    • Emelyanov, V.V.1
  • 17
    • 33747346787 scopus 로고    scopus 로고
    • The COX18 gene, involved in mitochondrial biogenesis, is functionally conserved and tightly regulated in humans and fission yeast
    • Gaisne M., Bonnefoy N. The COX18 gene, involved in mitochondrial biogenesis, is functionally conserved and tightly regulated in humans and fission yeast. FEMS Yeast Res. 2006, 6:869-882.
    • (2006) FEMS Yeast Res. , vol.6 , pp. 869-882
    • Gaisne, M.1    Bonnefoy, N.2
  • 18
    • 84934443866 scopus 로고    scopus 로고
    • In vivo labeling and analysis of mitochondrial translation products in budding and in fission yeasts
    • Gouget K., Verde F., Barrientos A. In vivo labeling and analysis of mitochondrial translation products in budding and in fission yeasts. Meth. Mol. Biol. 2008, 457:113-124.
    • (2008) Meth. Mol. Biol. , vol.457 , pp. 113-124
    • Gouget, K.1    Verde, F.2    Barrientos, A.3
  • 19
    • 0024215989 scopus 로고
    • Genetic engineering of Schizosaccharomyces pombe: a system for gene disruption and replacement using the ura4 gene as a selectable marker
    • Grimm C., Kohli J., Murray J., Maundrell K. Genetic engineering of Schizosaccharomyces pombe: a system for gene disruption and replacement using the ura4 gene as a selectable marker. Mol. Gen. Genet. 1988, 215:81-86.
    • (1988) Mol. Gen. Genet. , vol.215 , pp. 81-86
    • Grimm, C.1    Kohli, J.2    Murray, J.3    Maundrell, K.4
  • 20
    • 0026652375 scopus 로고
    • Nuclear mutations in the petite-negative yeast Schizosaccharomyces pombe allow growth of cells lacking mitochondrial DNA
    • Haffter P., Fox T.D. Nuclear mutations in the petite-negative yeast Schizosaccharomyces pombe allow growth of cells lacking mitochondrial DNA. Genetics 1992, 131:255-260.
    • (1992) Genetics , vol.131 , pp. 255-260
    • Haffter, P.1    Fox, T.D.2
  • 21
    • 84871819218 scopus 로고    scopus 로고
    • Control of protein synthesis in yeast mitochondria: the concept of translational activators
    • Herrmann J.M., Woellhaf M.W., Bonnefoy N. Control of protein synthesis in yeast mitochondria: the concept of translational activators. Biochim. Biophys. Acta 2013, 1833:286-294.
    • (2013) Biochim. Biophys. Acta , vol.1833 , pp. 286-294
    • Herrmann, J.M.1    Woellhaf, M.W.2    Bonnefoy, N.3
  • 22
    • 0023481280 scopus 로고
    • A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli
    • Hoffman C.S., Winston F. A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli. Gene 1987, 57:267-272.
    • (1987) Gene , vol.57 , pp. 267-272
    • Hoffman, C.S.1    Winston, F.2
  • 23
    • 40849083259 scopus 로고    scopus 로고
    • The 3' ends of mature transcripts are generated by a processosome complex in fission yeast mitochondria
    • Hoffmann B., Nickel J., Speer F., Schafer B. The 3' ends of mature transcripts are generated by a processosome complex in fission yeast mitochondria. J. Mol. Biol. 2008, 377:1024-1037.
    • (2008) J. Mol. Biol. , vol.377 , pp. 1024-1037
    • Hoffmann, B.1    Nickel, J.2    Speer, F.3    Schafer, B.4
  • 26
    • 80054056082 scopus 로고    scopus 로고
    • A genome wide study in fission yeast reveals nine PPR proteins that regulate mitochondrial gene expression
    • Kühl I., Dujeancourt L., Gaisne M., Herbert C.J., Bonnefoy N. A genome wide study in fission yeast reveals nine PPR proteins that regulate mitochondrial gene expression. Nucleic Acids Res. 2011, 39:8029-8041.
    • (2011) Nucleic Acids Res. , vol.39 , pp. 8029-8041
    • Kühl, I.1    Dujeancourt, L.2    Gaisne, M.3    Herbert, C.J.4    Bonnefoy, N.5
  • 28
    • 84934437830 scopus 로고    scopus 로고
    • Preparation of respiratory chain complexes from Saccharomyces cerevisiae wild-type and mutant mitochondria: activity measurement and subunit composition analysis
    • Lemaire C., Dujardin G. Preparation of respiratory chain complexes from Saccharomyces cerevisiae wild-type and mutant mitochondria: activity measurement and subunit composition analysis. Meth. Mol. Biol. 2008, 432:65-81.
    • (2008) Meth. Mol. Biol. , vol.432 , pp. 65-81
    • Lemaire, C.1    Dujardin, G.2
  • 29
    • 10244240475 scopus 로고    scopus 로고
    • PDUAL, a multipurpose, multicopy vector capable of chromosomal integration in fission yeast
    • Matsuyama A., Shirai A., Yashiroda Y., Kamata A., Horinouchi S., Yoshida M. pDUAL, a multipurpose, multicopy vector capable of chromosomal integration in fission yeast. Yeast 2004, 21:1289-1305.
    • (2004) Yeast , vol.21 , pp. 1289-1305
    • Matsuyama, A.1    Shirai, A.2    Yashiroda, Y.3    Kamata, A.4    Horinouchi, S.5    Yoshida, M.6
  • 31
    • 0028305727 scopus 로고
    • A single proteolytic cleavage in release factor 2 stabilizes ribosome binding and abolishes peptidyl-tRNA hydrolysis activity
    • Moffat J.G., Tate W.P. A single proteolytic cleavage in release factor 2 stabilizes ribosome binding and abolishes peptidyl-tRNA hydrolysis activity. J. Biol. Chem. 1994, 269:18899-18903.
    • (1994) J. Biol. Chem. , vol.269 , pp. 18899-18903
    • Moffat, J.G.1    Tate, W.P.2
  • 32
    • 0025123810 scopus 로고
    • High-frequency transformation method and library transducing vectors for cloning mammalian cDNAs by trans-complementation of Schizosaccharomyces pombe
    • Okazaki K., Okazaki N., Kume K., Jinno S., Tanaka K., Okayama H. High-frequency transformation method and library transducing vectors for cloning mammalian cDNAs by trans-complementation of Schizosaccharomyces pombe. Nucleic Acids Res. 1990, 18:6485-6489.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 6485-6489
    • Okazaki, K.1    Okazaki, N.2    Kume, K.3    Jinno, S.4    Tanaka, K.5    Okayama, H.6
  • 33
    • 0026674036 scopus 로고
    • Sequence comparison of new prokaryotic and mitochondrial members of the polypeptide chain release factor family predicts a five-domain model for release factor structure
    • Pel H.J., Rep M., Grivell L.A. Sequence comparison of new prokaryotic and mitochondrial members of the polypeptide chain release factor family predicts a five-domain model for release factor structure. Nucleic Acids Res. 1992, 20:4423-4428.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 4423-4428
    • Pel, H.J.1    Rep, M.2    Grivell, L.A.3
  • 34
    • 0036276995 scopus 로고    scopus 로고
    • PCR-based engineering of yeast genome
    • Petracek M.E., Longtine M.S. PCR-based engineering of yeast genome. Methods Enzymol. 2002, 350:445-469.
    • (2002) Methods Enzymol. , vol.350 , pp. 445-469
    • Petracek, M.E.1    Longtine, M.S.2
  • 36
    • 0028981021 scopus 로고
    • Conservative sorting of F0-ATPase subunit 9: export from matrix requires delta pH across inner membrane and matrix ATP
    • Rojo E.E., Stuart R.A., Neupert W. Conservative sorting of F0-ATPase subunit 9: export from matrix requires delta pH across inner membrane and matrix ATP. EMBO J. 1995, 14:3445-3451.
    • (1995) EMBO J. , vol.14 , pp. 3445-3451
    • Rojo, E.E.1    Stuart, R.A.2    Neupert, W.3
  • 39
    • 11344289875 scopus 로고    scopus 로고
    • A physiological connection between tmRNA and peptidyl-tRNA hydrolase functions in Escherichia coli
    • Singh N.S., Varshney U. A physiological connection between tmRNA and peptidyl-tRNA hydrolase functions in Escherichia coli. Nucleic Acids Res. 2004, 32:6028-6037.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 6028-6037
    • Singh, N.S.1    Varshney, U.2
  • 41
    • 0029904234 scopus 로고    scopus 로고
    • Expression of a recoded nuclear gene inserted into yeast mitochondrial DNA is limited by mRNA-specific translational activation
    • Steele D.F., Butler C.A., Fox T.D. Expression of a recoded nuclear gene inserted into yeast mitochondrial DNA is limited by mRNA-specific translational activation. Proc. Natl. Acad. Sci. U. S. A. 1996, 93:5253-5257.
    • (1996) Proc. Natl. Acad. Sci. U. S. A. , vol.93 , pp. 5253-5257
    • Steele, D.F.1    Butler, C.A.2    Fox, T.D.3
  • 42
    • 0034891950 scopus 로고    scopus 로고
    • High efficiency transformation of Schizosaccharomyces pombe pretreated with thiol compounds by electroporation
    • Suga M., Hatakeyama T. High efficiency transformation of Schizosaccharomyces pombe pretreated with thiol compounds by electroporation. Yeast 2001, 18:1015-1021.
    • (2001) Yeast , vol.18 , pp. 1015-1021
    • Suga, M.1    Hatakeyama, T.2
  • 43
    • 65049085796 scopus 로고    scopus 로고
    • Gene transfer and protein release of fission yeast by application of a high voltage electric pulse
    • Suga M., Hatakeyama T. Gene transfer and protein release of fission yeast by application of a high voltage electric pulse. Anal. Bioanal. Chem. 2009, 394:13-16.
    • (2009) Anal. Bioanal. Chem. , vol.394 , pp. 13-16
    • Suga, M.1    Hatakeyama, T.2
  • 44
    • 0033910374 scopus 로고    scopus 로고
    • Cryopreservation of competent intact yeast cells for efficient electroporation
    • Suga M., Isobe M., Hatakeyama T. Cryopreservation of competent intact yeast cells for efficient electroporation. Yeast 2000, 16:889-896.
    • (2000) Yeast , vol.16 , pp. 889-896
    • Suga, M.1    Isobe, M.2    Hatakeyama, T.3
  • 45
    • 0842288279 scopus 로고    scopus 로고
    • Electroporation of Schizosaccharomyces pombe by hyperosmotic post-pulse incubation
    • Suga M., Kusanagi I., Hatakeyama T. Electroporation of Schizosaccharomyces pombe by hyperosmotic post-pulse incubation. Biotechniques 2004, 36:218-220.
    • (2004) Biotechniques , vol.36 , pp. 218-220
    • Suga, M.1    Kusanagi, I.2    Hatakeyama, T.3
  • 47
    • 0029871347 scopus 로고    scopus 로고
    • PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae
    • Wach A. PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae. Yeast 1996, 12:259-265.
    • (1996) Yeast , vol.12 , pp. 259-265
    • Wach, A.1
  • 48
    • 0028676232 scopus 로고
    • New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae
    • Wach A., Brachat A., Pohlmann R., Philippsen P. New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae. Yeast 1994, 10:1793-1808.
    • (1994) Yeast , vol.10 , pp. 1793-1808
    • Wach, A.1    Brachat, A.2    Pohlmann, R.3    Philippsen, P.4
  • 50
    • 84856284594 scopus 로고    scopus 로고
    • Mechanisms of mitochondrial diseases
    • Ylikallio E., Suomalainen A. Mechanisms of mitochondrial diseases. Ann. Med. 2012, 44:41-59.
    • (2012) Ann. Med. , vol.44 , pp. 41-59
    • Ylikallio, E.1    Suomalainen, A.2
  • 51
    • 53849146066 scopus 로고    scopus 로고
    • Peptide release on the ribosome: mechanism and implications for translational control
    • Youngman E.M., McDonald M.E., Green R. Peptide release on the ribosome: mechanism and implications for translational control. Annu. Rev. Microbiol. 2008, 62:353-373.
    • (2008) Annu. Rev. Microbiol. , vol.62 , pp. 353-373
    • Youngman, E.M.1    McDonald, M.E.2    Green, R.3


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