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Volumn 33, Issue 20, 2013, Pages 3976-3982

Emerging roles of competing endogenous RNAs in cancer: Insights from the regulation of PTEN

Author keywords

[No Author keywords available]

Indexed keywords

COMPETING ENDOGENOUS RNA; MESSENGER RNA; MICRORNA; PHOSPHATIDYLINOSITOL 3,4,5 TRISPHOSPHATE 3 PHOSPHATASE; RNA; UNCLASSIFIED DRUG; UNTRANSLATED RNA;

EID: 84886910303     PISSN: 02707306     EISSN: 10985549     Source Type: Journal    
DOI: 10.1128/MCB.00683-13     Document Type: Short Survey
Times cited : (65)

References (82)
  • 2
    • 34249088350 scopus 로고    scopus 로고
    • Genome-wide transcription and the implications for genomic organization
    • Kapranov P, Willingham AT, Gingeras TR. 2007. Genome-wide transcription and the implications for genomic organization. Nat. Rev. Genet. 8:413-423
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 413-423
    • Kapranov, P.1    Willingham, A.T.2    Gingeras, T.R.3
  • 3
    • 1942435249 scopus 로고    scopus 로고
    • Micromanagers of gene expression: the potentially widespread influence of metazoan microRNAs
    • Bartel DP, Chen C-Z. 2004. Micromanagers of gene expression: the potentially widespread influence of metazoan microRNAs. Nat. Rev. Genet. 5:396-400
    • (2004) Nat. Rev. Genet. , vol.5 , pp. 396-400
    • Bartel, D.P.1    Chen, C.-Z.2
  • 4
    • 58249088751 scopus 로고    scopus 로고
    • MicroRNAs: target recognition and regulatory functions
    • Bartel DP. 2009. MicroRNAs: target recognition and regulatory functions. Cell 136:215-233
    • (2009) Cell , vol.136 , pp. 215-233
    • Bartel, D.P.1
  • 8
    • 77955902024 scopus 로고    scopus 로고
    • The widespread regulation of microRNA biogenesis, function and decay
    • Krol J, Loedige I, Filipowicz W. 2010. The widespread regulation of microRNA biogenesis, function and decay. Nat. Rev. Genet. 11:597-610
    • (2010) Nat. Rev. Genet. , vol.11 , pp. 597-610
    • Krol, J.1    Loedige, I.2    Filipowicz, W.3
  • 9
    • 84876374428 scopus 로고    scopus 로고
    • Deep sequencing of small RNAs identifiescanonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues
    • Castellano L, Stebbing J. 2013. Deep sequencing of small RNAs identifiescanonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues. Nucleic Acids Res. 41:3339-3351
    • (2013) Nucleic Acids Res , vol.41 , pp. 3339-3351
    • Castellano, L.1    Stebbing, J.2
  • 10
    • 77951964981 scopus 로고    scopus 로고
    • Posttranscriptional regulation of microRNA biogenesis in animals
    • Siomi H, Siomi MC. 2010. Posttranscriptional regulation of microRNA biogenesis in animals. Mol. Cell 38:323-332
    • (2010) Mol. Cell , vol.38 , pp. 323-332
    • Siomi, H.1    Siomi, M.C.2
  • 11
    • 84863005508 scopus 로고    scopus 로고
    • Autoregulation of microRNA biogenesis by let-7 and Argonaute
    • Zisoulis DG, Kai ZS, Chang RK, Pasquinelli AE. 2012. Autoregulation of microRNA biogenesis by let-7 and Argonaute. Nature 486:541-544
    • (2012) Nature , vol.486 , pp. 541-544
    • Zisoulis, D.G.1    Kai, Z.S.2    Chang, R.K.3    Pasquinelli, A.E.4
  • 13
    • 0033572284 scopus 로고    scopus 로고
    • The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation
    • Olsen PH, Ambros V. 1999. The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation. Dev. Biol. 216:671-680
    • (1999) Dev. Biol. , vol.216 , pp. 671-680
    • Olsen, P.H.1    Ambros, V.2
  • 16
    • 77955644289 scopus 로고    scopus 로고
    • Mammalian microRNAs predominantly act to decrease target mRNA levels
    • Guo H, Ingolia NT, Weissman JS, Bartel DP. 2010. Mammalian microRNAs predominantly act to decrease target mRNA levels. Nature 466:835-840
    • (2010) Nature , vol.466 , pp. 835-840
    • Guo, H.1    Ingolia, N.T.2    Weissman, J.S.3    Bartel, D.P.4
  • 17
    • 84864453787 scopus 로고    scopus 로고
    • The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments
    • Ingolia NT, Brar GA, Rouskin S, McGeachy AM, Weissman JS. 2012. The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments. Nat. Protoc. 7:1534-1550
    • (2012) Nat. Protoc. , vol.7 , pp. 1534-1550
    • Ingolia, N.T.1    Brar, G.A.2    Rouskin, S.3    McGeachy, A.M.4    Weissman, J.S.5
  • 18
    • 84870527178 scopus 로고    scopus 로고
    • Contributions of mRNA abundance, ribosome loading, and post- or peri-translational effects to temporal repression of C. elegans heterochronic miRNA targets
    • Stadler M, Artiles K, Pak J, Fire A. 2012. Contributions of mRNA abundance, ribosome loading, and post- or peri-translational effects to temporal repression of C. elegans heterochronic miRNA targets. Genome Res. 22:2418-2426
    • (2012) Genome Res , vol.22 , pp. 2418-2426
    • Stadler, M.1    Artiles, K.2    Pak, J.3    Fire, A.4
  • 19
    • 84862778053 scopus 로고    scopus 로고
    • Ribosome profiling shows that miR-430 reduces translation before causing mRNA decay in zebrafish
    • Bazzini AA, Lee MT, Giraldez AJ. 2012. Ribosome profiling shows that miR-430 reduces translation before causing mRNA decay in zebrafish. Science 336:233-237
    • (2012) Science , vol.336 , pp. 233-237
    • Bazzini, A.A.1    Lee, M.T.2    Giraldez, A.J.3
  • 20
    • 77953957633 scopus 로고    scopus 로고
    • A coding-independent function of gene and pseudogene mRNAs regulates tumour biology
    • Poliseno L, Salmena L, Zhang J, Carver B, Haveman WJ, PandolfiPP. 2010. A coding-independent function of gene and pseudogene mRNAs regulates tumour biology. Nature 465:1033-1038
    • (2010) Nature , vol.465 , pp. 1033-1038
    • Poliseno, L.1    Salmena, L.2    Zhang, J.3    Carver, B.4    Haveman, W.J.5    Pandolfi, P.P.6
  • 21
    • 84876367541 scopus 로고    scopus 로고
    • Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stem cell self-renewal
    • Wang Y, Xu Z, Jiang J, Xu C, Kang J, Xiao L, Wu M, Xiong J, Guo X, Liu H. 2013. Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stem cell self-renewal. Dev. Cell 25:69-80
    • (2013) Dev. Cell , vol.25 , pp. 69-80
    • Wang, Y.1    Xu, Z.2    Jiang, J.3    Xu, C.4    Kang, J.5    Xiao, L.6    Wu, M.7    Xiong, J.8    Guo, X.9    Liu, H.10
  • 25
    • 60149099385 scopus 로고    scopus 로고
    • Evolution and functions of long noncoding RNAs
    • Ponting CP, Oliver PL, Reik W. 2009. Evolution and functions of long noncoding RNAs. Cell 136:629-641
    • (2009) Cell , vol.136 , pp. 629-641
    • Ponting, C.P.1    Oliver, P.L.2    Reik, W.3
  • 32
    • 17844396017 scopus 로고    scopus 로고
    • Transcribed processed pseudogenes in the human genome: an intermediate form of expressed retrosequence lacking protein-coding ability
    • Harrison PM, Zheng D, Zhang Z, Carriero N, Gerstein M. 2005. Transcribed processed pseudogenes in the human genome: an intermediate form of expressed retrosequence lacking protein-coding ability. Nucleic Acids Res. 33:2374-2383
    • (2005) Nucleic Acids Res , vol.33 , pp. 2374-2383
    • Harrison, P.M.1    Zheng, D.2    Zhang, Z.3    Carriero, N.4    Gerstein, M.5
  • 33
    • 84863045982 scopus 로고    scopus 로고
    • Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types
    • doi:10.1371/journal.pone.0030733
    • Salzman J, Gawad C, Wang PL, Lacayo N, Brown PO. 2012. Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types. PLoS One 7:e30733. doi:10.1371/journal.pone.0030733
    • (2012) PLoS One , vol.7
    • Salzman, J.1    Gawad, C.2    Wang, P.L.3    Lacayo, N.4    Brown, P.O.5
  • 36
    • 84874833554 scopus 로고    scopus 로고
    • MicroRNAs as a selective channel of communication between competing RNAs: a steady-state theory
    • Figliuzzi M, Marinari E, De Martino A. 2013. MicroRNAs as a selective channel of communication between competing RNAs: a steady-state theory. Biophys. J. 104:1203-1213
    • (2013) Biophys. J. , vol.104 , pp. 1203-1213
    • Figliuzzi, M.1    Marinari, E.2    De Martino, A.3
  • 40
    • 33744973775 scopus 로고    scopus 로고
    • Relief of microRNA-mediated translational repression in human cells subjected to stress
    • Bhattacharyya SN, Habermacher R, Martine U, Closs EI, Filipowicz W. 2006. Relief of microRNA-mediated translational repression in human cells subjected to stress. Cell 125:1111-1124
    • (2006) Cell , vol.125 , pp. 1111-1124
    • Bhattacharyya, S.N.1    Habermacher, R.2    Martine, U.3    Closs, E.I.4    Filipowicz, W.5
  • 41
    • 56949098506 scopus 로고    scopus 로고
    • Molecular titration and ultrasensitivity in regulatory networks
    • Buchler NE, Louis M. 2008. Molecular titration and ultrasensitivity in regulatory networks. J. Mol. Biol. 384:1106-1119
    • (2008) J. Mol. Biol. , vol.384 , pp. 1106-1119
    • Buchler, N.E.1    Louis, M.2
  • 42
    • 56949096652 scopus 로고    scopus 로고
    • Small RNAs establish gene expression thresholds
    • Levine E, Hwa T. 2008. Small RNAs establish gene expression thresholds. Curr. Opin. Microbiol. 11:574-579
    • (2008) Curr. Opin. Microbiol. , vol.11 , pp. 574-579
    • Levine, E.1    Hwa, T.2
  • 44
    • 77951474125 scopus 로고    scopus 로고
    • Target mRNA abundance dilutes microRNA and siRNA activity
    • doi:10.1038/msb.2010.24
    • Arvey A, Larsson E, Sander C, Leslie CS, Marks DS. 2010. Target mRNA abundance dilutes microRNA and siRNA activity. Mol. Syst. Biol. 6:363. doi:10.1038/msb.2010.24
    • (2010) Mol. Syst. Biol. , vol.6 , pp. 363
    • Arvey, A.1    Larsson, E.2    Sander, C.3    Leslie, C.S.4    Marks, D.S.5
  • 48
    • 34247593034 scopus 로고    scopus 로고
    • Impaired microRNA processing enhances cellular transformation and tumorigenesis
    • Kumar MS, Lu J, Mercer KL, Golub TR, Jacks T. 2007. Impaired microRNA processing enhances cellular transformation and tumorigenesis. Nat. Genet. 39:673-677
    • (2007) Nat. Genet. , vol.39 , pp. 673-677
    • Kumar, M.S.1    Lu, J.2    Mercer, K.L.3    Golub, T.R.4    Jacks, T.5
  • 51
    • 68749113985 scopus 로고    scopus 로고
    • Widespread shortening of 3=UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells
    • Mayr C, Bartel DP. 2009. Widespread shortening of 3=UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells. Cell 138:673-684
    • (2009) Cell , vol.138 , pp. 673-684
    • Mayr, C.1    Bartel, D.P.2
  • 52
    • 46249092601 scopus 로고    scopus 로고
    • Proliferating cells express mRNAs with shortened 3= untranslated regions and fewer microRNA target sites
    • Sandberg R, Neilson JR, Sarma A, Sharp PA, Burge CB. 2008. Proliferating cells express mRNAs with shortened 3= untranslated regions and fewer microRNA target sites. Science 320:1643-1647
    • (2008) Science , vol.320 , pp. 1643-1647
    • Sandberg, R.1    Neilson, J.R.2    Sarma, A.3    Sharp, P.A.4    Burge, C.B.5
  • 57
    • 84861889524 scopus 로고    scopus 로고
    • HuR protein attenuates miRNA-mediated repression by promoting miRISC dissociation from the target RNA
    • Kundu P, Fabian MR, Sonenberg N, Bhattacharyya SN, Filipowicz W. 2012. HuR protein attenuates miRNA-mediated repression by promoting miRISC dissociation from the target RNA. Nucleic Acids Res. 40:5088-5100
    • (2012) Nucleic Acids Res , vol.40 , pp. 5088-5100
    • Kundu, P.1    Fabian, M.R.2    Sonenberg, N.3    Bhattacharyya, S.N.4    Filipowicz, W.5
  • 60
    • 80052041185 scopus 로고    scopus 로고
    • MicroRNA regulation by RNA-binding proteins and its implications for cancer
    • Van Kouwenhove M, Kedde M, Agami R. 2011. MicroRNA regulation by RNA-binding proteins and its implications for cancer. Nat. Rev. Cancer 11:644-656
    • (2011) Nat. Rev. Cancer , vol.11 , pp. 644-656
    • Van Kouwenhove, M.1    Kedde, M.2    Agami, R.3
  • 61
    • 33746516731 scopus 로고    scopus 로고
    • hnRNP A1 relocalization to the stress granules reflects a role in the stress response
    • Guil S, Long JC, Cáceres JF. 2006. hnRNP A1 relocalization to the stress granules reflects a role in the stress response. Mol. Cell. Biol. 26:5744-5758
    • (2006) Mol. Cell. Biol. , vol.26 , pp. 5744-5758
    • Guil, S.1    Long, J.C.2    Cáceres, J.F.3
  • 63
    • 34548316982 scopus 로고    scopus 로고
    • MicroRNA sponges: competitive inhibitors of small RNAs in mammalian cells
    • Ebert MS, Neilson JR, Sharp PA. 2007. MicroRNA sponges: competitive inhibitors of small RNAs in mammalian cells. Nat. Methods 4:721-726
    • (2007) Nat. Methods , vol.4 , pp. 721-726
    • Ebert, M.S.1    Neilson, J.R.2    Sharp, P.A.3
  • 64
    • 67651087321 scopus 로고    scopus 로고
    • Exploiting and antagonizing microRNA regulation for therapeutic and experimental applications
    • Brown BD, Naldini L. 2009. Exploiting and antagonizing microRNA regulation for therapeutic and experimental applications. Nat. Rev. Genet. 10:578-585
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 578-585
    • Brown, B.D.1    Naldini, L.2
  • 66
    • 67349123973 scopus 로고    scopus 로고
    • Redefining microRNA targets
    • Seitz H. 2009. Redefining microRNA targets. Curr. Biol. 19:870-873
    • (2009) Curr. Biol. , vol.19 , pp. 870-873
    • Seitz, H.1
  • 68
    • 77957850291 scopus 로고    scopus 로고
    • Emerging roles for natural microRNA sponges
    • doi:10.1016/j.cub.2010.08.052
    • Ebert MS, Sharp PA. 2010. Emerging roles for natural microRNA sponges. Curr. Biol. 20:R858-R861. doi:10.1016/j.cub.2010.08.052
    • (2010) Curr. Biol. , vol.20
    • Ebert, M.S.1    Sharp, P.A.2
  • 72
    • 54549108740 scopus 로고    scopus 로고
    • Comprehensive genomic characterization defines human glioblastoma genes and core pathways
    • Cancer Genome Atlas Research Network
    • Cancer Genome Atlas Research Network. 2008. Comprehensive genomic characterization defines human glioblastoma genes and core pathways. Nature 455:1061-1068
    • (2008) Nature , vol.455 , pp. 1061-1068
  • 73
    • 84876588507 scopus 로고    scopus 로고
    • Gene regulation, modulation, and their applications in gene expression data analysis
    • doi:10.1155/2013/360678
    • Flores M, Hsiao T-H, Chiu Y-C, Chuang EY, Huang Y, Chen Y. 2013. Gene regulation, modulation, and their applications in gene expression data analysis. Adv. Bioinformatics 2013:360678. doi:10.1155/2013/360678
    • (2013) Adv. Bioinformatics , pp. 360678
    • Flores, M.1    Hsiao, T.-H.2    Chiu, Y.-C.3    Chuang, E.Y.4    Huang, Y.5    Chen, Y.6
  • 74
    • 84876167066 scopus 로고    scopus 로고
    • Competing endogenous RNA database
    • Sarver AL, Subramanian S. 2012. Competing endogenous RNA database. Bioinformation 8:731-733
    • (2012) Bioinformation , vol.8 , pp. 731-733
    • Sarver, A.L.1    Subramanian, S.2
  • 75
    • 79955598536 scopus 로고    scopus 로고
    • Expression of CD44 3=-untranslated region regulates endogenous microRNA functions in tumorigenesis and angiogenesis
    • Jeyapalan Z, Deng Z, Shatseva T, Fang L, He C, Yang BB. 2011. Expression of CD44 3=-untranslated region regulates endogenous microRNA functions in tumorigenesis and angiogenesis. Nucleic Acids Res. 39:3026-3041
    • (2011) Nucleic Acids Res , vol.39 , pp. 3026-3041
    • Jeyapalan, Z.1    Deng, Z.2    Shatseva, T.3    Fang, L.4    He, C.5    Yang, B.B.6
  • 77
    • 67749132423 scopus 로고    scopus 로고
    • Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps
    • Chi SW, Zang JB, Mele A, Darnell RB. 2009. Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps. Nature 460:479-486
    • (2009) Nature , vol.460 , pp. 479-486
    • Chi, S.W.1    Zang, J.B.2    Mele, A.3    Darnell, R.B.4
  • 82
    • 54249093368 scopus 로고    scopus 로고
    • MicroRNA-7, a homeobox D10 target, inhibits p21-activated kinase 1 and regulates its functions
    • Reddy SDN, Ohshiro K, Rayala SK, Kumar R. 2008. MicroRNA-7, a homeobox D10 target, inhibits p21-activated kinase 1 and regulates its functions. Cancer Res. 68:8195-8200.
    • (2008) Cancer Res , vol.68 , pp. 8195-8200
    • Reddy, S.D.N.1    Ohshiro, K.2    Rayala, S.K.3    Kumar, R.4


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