-
1
-
-
80051555960
-
Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition
-
Aanes H, Winata CL, Lin CH, Chen JQP, Srinivasan KG, Lee SGP, Lim AYM, Hajan HS, Collas P, Bourque G, Gong ZY, Korzh V, Alestrom P, Mathavan S (2011) Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition. Genome Res 21: 1328-1338.
-
(2011)
Genome Res
, vol.21
, pp. 1328-1338
-
-
Aanes, H.1
Winata, C.L.2
Lin, C.H.3
Chen, J.Q.P.4
Srinivasan, K.G.5
Lee, S.G.P.6
Lim, A.Y.M.7
Hajan, H.S.8
Collas, P.9
Bourque, G.10
Gong, Z.Y.11
Korzh, V.12
Alestrom, P.13
Mathavan, S.14
-
2
-
-
25444458824
-
Large scale real-time PCR analysis of mRNA abundance in rainbow trout eggs in relationship with egg quality and post-ovulatory ageing
-
Aegerter S, Jalabert B, Bobe J (2005) Large scale real-time PCR analysis of mRNA abundance in rainbow trout eggs in relationship with egg quality and post-ovulatory ageing. Mol Reprod Dev 72: 377-385.
-
(2005)
Mol Reprod Dev
, vol.72
, pp. 377-385
-
-
Aegerter, S.1
Jalabert, B.2
Bobe, J.3
-
3
-
-
0003880161
-
-
4th edn., New York: Garland Science, Taylor & Francis Group
-
Alberts B, Johnson A, Lewis J, Raff M, Roberts K, Walter P (2002) Molecular biology of the cell, 4th edn. Garland Science, Taylor & Francis Group, New York.
-
(2002)
Molecular Biology of the Cell
-
-
Alberts, B.1
Johnson, A.2
Lewis, J.3
Raff, M.4
Roberts, K.5
Walter, P.6
-
4
-
-
33745918951
-
TIGAR, a p53-inducible regulator of glycolysis and apoptosis
-
Bensaad K, Tsuruta A, Selak MA, Vidal MNC, Nakano K, Bartrons R, Gottlieb E, Vousden KH (2006) TIGAR, a p53-inducible regulator of glycolysis and apoptosis. Cell 126: 107-120.
-
(2006)
Cell
, vol.126
, pp. 107-120
-
-
Bensaad, K.1
Tsuruta, A.2
Selak, M.A.3
Vidal, M.N.C.4
Nakano, K.5
Bartrons, R.6
Gottlieb, E.7
Vousden, K.H.8
-
5
-
-
73349134655
-
Egg and sperm quality in fish
-
Bobe J, Labbé C (2010) Egg and sperm quality in fish. Gen Comp Endocrinol 165: 535-548.
-
(2010)
Gen Comp Endocrinol
, vol.165
, pp. 535-548
-
-
Bobe, J.1
Labbé, C.2
-
7
-
-
33847628065
-
Microarray-based analysis of fish egg quality after natural or controlled ovulation
-
Bonnet E, Fostier A, Bobe J (2007) Microarray-based analysis of fish egg quality after natural or controlled ovulation. BMC Genomics 8: 55.
-
(2007)
BMC Genomics
, vol.8
, pp. 55
-
-
Bonnet, E.1
Fostier, A.2
Bobe, J.3
-
8
-
-
33645541393
-
Degrade to create: developmental requirements for ubiquitin-mediated proteolysis during early C. elegans embryogenesis
-
Bowerman B, Kurz T (2006) Degrade to create: developmental requirements for ubiquitin-mediated proteolysis during early C. elegans embryogenesis. Development 133: 773-784.
-
(2006)
Development
, vol.133
, pp. 773-784
-
-
Bowerman, B.1
Kurz, T.2
-
10
-
-
79952484921
-
Seminal plasma biochemistry and spermatozoa characteristics of Atlantic cod (Gadus morhua) of wild and cultivated origin
-
Butts IAE, Trippel EA, Ciereszko A, Soler C, Słowińska M, Alavi SMH, Litvak MK, Babiak I (2011) Seminal plasma biochemistry and spermatozoa characteristics of Atlantic cod (Gadus morhua) of wild and cultivated origin. Comp Biochem Physiol A 159: 16-24.
-
(2011)
Comp Biochem Physiol A
, vol.159
, pp. 16-24
-
-
Butts, I.A.E.1
Trippel, E.A.2
Ciereszko, A.3
Soler, C.4
Słowińska, M.5
Alavi, S.M.H.6
Litvak, M.K.7
Babiak, I.8
-
11
-
-
0032918875
-
Yolk formation and degradation during oocyte maturation in seabream Sparus aurata: involvement of two lysosomal proteinases
-
Carnevali O, Carletta R, Cambi A, Vita A, Bromage N (1999) Yolk formation and degradation during oocyte maturation in seabream Sparus aurata: involvement of two lysosomal proteinases. Biol Reprod 60: 140-146.
-
(1999)
Biol Reprod
, vol.60
, pp. 140-146
-
-
Carnevali, O.1
Carletta, R.2
Cambi, A.3
Vita, A.4
Bromage, N.5
-
12
-
-
0035509860
-
Changes of lysosomal enzyme activities in sea bass (Dicentrarchus labrax) eggs and developing embryos
-
Carnevali O, Mosconi G, Cambi A, Ridolfi S, Zanuy S, Polzonetti-Magni AM (2001) Changes of lysosomal enzyme activities in sea bass (Dicentrarchus labrax) eggs and developing embryos. Aquaculture 202: 249-256.
-
(2001)
Aquaculture
, vol.202
, pp. 249-256
-
-
Carnevali, O.1
Mosconi, G.2
Cambi, A.3
Ridolfi, S.4
Zanuy, S.5
Polzonetti-Magni, A.M.6
-
13
-
-
77955579003
-
Tight junction proteins in zebrafish ovarian follicles: stage specific mRNA abundance and response to 17beta-estradiol, human chorionic gonadotropin, and maturation inducing hormone
-
Clelland ES, Kelly SP (2010) Tight junction proteins in zebrafish ovarian follicles: stage specific mRNA abundance and response to 17beta-estradiol, human chorionic gonadotropin, and maturation inducing hormone. Gen Comp Endocrinol 168: 388-400.
-
(2010)
Gen Comp Endocrinol
, vol.168
, pp. 388-400
-
-
Clelland, E.S.1
Kelly, S.P.2
-
14
-
-
84860790588
-
Fast skeletal muscle transcriptome of the gilthead sea bream (Sparus aurata) determined by next generation sequencing
-
Garcia de la Serrana D, Estévez A, Andree K, Johnston IA (2012) Fast skeletal muscle transcriptome of the gilthead sea bream (Sparus aurata) determined by next generation sequencing. BMC Genomics 13: 181.
-
(2012)
BMC Genomics
, vol.13
, pp. 181
-
-
Garcia de la Serrana, D.1
Estévez, A.2
Andree, K.3
Johnston, I.A.4
-
15
-
-
46949104585
-
The interaction network of the chaperonin CCT
-
Dekker C, Stirling PC, McCormack EA, Filmore H, Paul A, Brost RL, Costanzo M, Boone C, Leroux MR, Willison KR (2008) The interaction network of the chaperonin CCT. EMBO J 27: 1827-1839.
-
(2008)
EMBO J
, vol.27
, pp. 1827-1839
-
-
Dekker, C.1
Stirling, P.C.2
McCormack, E.A.3
Filmore, H.4
Paul, A.5
Brost, R.L.6
Costanzo, M.7
Boone, C.8
Leroux, M.R.9
Willison, K.R.10
-
16
-
-
43149123320
-
Ontogenesis of catabolic and energy metabolism capacities during the embryonic development of spotted wolffish (Anarhichas minor)
-
Desrosiers V, Le François NR, Tveiten H, Andreassen I, Blier PU (2008) Ontogenesis of catabolic and energy metabolism capacities during the embryonic development of spotted wolffish (Anarhichas minor). Comp Biochem Physiol B 150: 200-206.
-
(2008)
Comp Biochem Physiol B
, vol.150
, pp. 200-206
-
-
Desrosiers, V.1
Le François, N.R.2
Tveiten, H.3
Andreassen, I.4
Blier, P.U.5
-
17
-
-
84857234393
-
Gene expression profiling of Atlantic cod (Gadus morhua) embryogenesis using microarray
-
Drivenes Ø, Taranger GL, Edvardsen RB (2012) Gene expression profiling of Atlantic cod (Gadus morhua) embryogenesis using microarray. Mar Biotechnol 14: 167-176.
-
(2012)
Mar Biotechnol
, vol.14
, pp. 167-176
-
-
Drivenes, Ø.1
Taranger, G.L.2
Edvardsen, R.B.3
-
18
-
-
50149095793
-
The Genome Sequencer FLXTM System-longer reads, more applications, straight forward bioinformatics and more complete data sets
-
Droege M, Hill B (2008) The Genome Sequencer FLXTM System-longer reads, more applications, straight forward bioinformatics and more complete data sets. J Biotechnol 136: 3-10.
-
(2008)
J Biotechnol
, vol.136
, pp. 3-10
-
-
Droege, M.1
Hill, B.2
-
19
-
-
84858116755
-
Comparison between normalised and unnormalised 454-sequencing libraries for small-scale RNA-Seq studies
-
Ekblom R, Slate J, Horsburgh GJ, Birkhead T, Burke T (2012) Comparison between normalised and unnormalised 454-sequencing libraries for small-scale RNA-Seq studies. Comp Funct Genomics 2012: 1-8.
-
(2012)
Comp Funct Genomics
, vol.2012
, pp. 1-8
-
-
Ekblom, R.1
Slate, J.2
Horsburgh, G.J.3
Birkhead, T.4
Burke, T.5
-
20
-
-
0942265428
-
Ovarian cysteine proteinases in the teleost Fundulus heteroclitus: molecular cloning and gene expression during vitellogenesis and oocyte maturation
-
Fabra M, Cerdà J (2004) Ovarian cysteine proteinases in the teleost Fundulus heteroclitus: molecular cloning and gene expression during vitellogenesis and oocyte maturation. Mol Reprod Dev 67: 282-294.
-
(2004)
Mol Reprod Dev
, vol.67
, pp. 282-294
-
-
Fabra, M.1
Cerdà, J.2
-
21
-
-
45249097595
-
Biochemical composition and quality of captive-spawned cobia Rachycentron canadum eggs
-
Faulk CK, Holt GJ (2008) Biochemical composition and quality of captive-spawned cobia Rachycentron canadum eggs. Aquaculture 279: 70-76.
-
(2008)
Aquaculture
, vol.279
, pp. 70-76
-
-
Faulk, C.K.1
Holt, G.J.2
-
22
-
-
41549134734
-
Selection of suitable reference genes for real-time PCR studies of Atlantic halibut
-
Fernandes JMO, Mommens M, Hagen Ø, Babiak I, Solberg C (2008) Selection of suitable reference genes for real-time PCR studies of Atlantic halibut. Comp Biochem Physiol B 150: 23-32.
-
(2008)
Comp Biochem Physiol B
, vol.150
, pp. 23-32
-
-
Fernandes, J.M.O.1
Mommens, M.2
Hagen, Ø.3
Babiak, I.4
Solberg, C.5
-
23
-
-
0029844610
-
Physiological energetics of developing embryos and yolk-sac larvae of Atlantic cod (Gadus morhua). I. Respiration and nitrogen metabolism
-
Finn RN, Fyhn HJ, Evjen MS (1995) Physiological energetics of developing embryos and yolk-sac larvae of Atlantic cod (Gadus morhua). I. Respiration and nitrogen metabolism. Mar Biol 124: 355-369.
-
(1995)
Mar Biol
, vol.124
, pp. 355-369
-
-
Finn, R.N.1
Fyhn, H.J.2
Evjen, M.S.3
-
24
-
-
0000654109
-
Changes in lipid content, lipid class composition and fatty acid composition of developing eggs and unfed larvae of cod (Gadus morhua)
-
Fraser AJ, Gamble JC, Sargent JR (1988) Changes in lipid content, lipid class composition and fatty acid composition of developing eggs and unfed larvae of cod (Gadus morhua). Mar Biol 99: 307-313.
-
(1988)
Mar Biol
, vol.99
, pp. 307-313
-
-
Fraser, A.J.1
Gamble, J.C.2
Sargent, J.R.3
-
25
-
-
0034924812
-
Folding of newly translated proteins in vivo: the role of molecular chaperones
-
Frydman J (2001) Folding of newly translated proteins in vivo: the role of molecular chaperones. Annu Rev Biochem 70: 603-647.
-
(2001)
Annu Rev Biochem
, vol.70
, pp. 603-647
-
-
Frydman, J.1
-
26
-
-
7044282518
-
Biochemical composition of eggs in relation to egg quality in Japanese eel, Anguilla japonica
-
Furuita H, Ohta H, Unuma T, Tanaka H, Kagawa H, Suzuki N, Yamamoto T (2003) Biochemical composition of eggs in relation to egg quality in Japanese eel, Anguilla japonica. Fish Physiol Biochem 29: 37-46.
-
(2003)
Fish Physiol Biochem
, vol.29
, pp. 37-46
-
-
Furuita, H.1
Ohta, H.2
Unuma, T.3
Tanaka, H.4
Kagawa, H.5
Suzuki, N.6
Yamamoto, T.7
-
27
-
-
45549089420
-
High-throughput functional annotation and data mining with the Blast2GO suite
-
Götz S, García-Gómez JM, Terol J, Williams TD, Nagaraj SH, Nueda MJ, Robles M, Talón M, Dopazo J, Conesa A (2008) High-throughput functional annotation and data mining with the Blast2GO suite. Nucleic Acids Res 36: 3420-3435.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 3420-3435
-
-
Götz, S.1
García-Gómez, J.M.2
Terol, J.3
Williams, T.D.4
Nagaraj, S.H.5
Nueda, M.J.6
Robles, M.7
Talón, M.8
Dopazo, J.9
Conesa, A.10
-
28
-
-
66349087005
-
Next-generation pyrosequencing of gonad transcriptomes in the polyploid lake sturgeon (Acipenser fulvescens): the relative merits of normalization and rarefaction in gene discovery
-
Hale MC, McCormick CR, Jackson JR, DeWoody JA (2009) Next-generation pyrosequencing of gonad transcriptomes in the polyploid lake sturgeon (Acipenser fulvescens): the relative merits of normalization and rarefaction in gene discovery. BMC Genomics 10: 203.
-
(2009)
BMC Genomics
, vol.10
, pp. 203
-
-
Hale, M.C.1
McCormick, C.R.2
Jackson, J.R.3
DeWoody, J.A.4
-
29
-
-
21844456631
-
The zebrafish gene claudinj is essential for normal ear function and important for the formation of the otoliths
-
Hardison AL, Lichten L, Banerjee-Basu S, Becker TS, Burguess SM (2005) The zebrafish gene claudinj is essential for normal ear function and important for the formation of the otoliths. Mech Dev 122: 949-958.
-
(2005)
Mech Dev
, vol.122
, pp. 949-958
-
-
Hardison, A.L.1
Lichten, L.2
Banerjee-Basu, S.3
Becker, T.S.4
Burguess, S.M.5
-
30
-
-
0346801873
-
The gene ontology (GO) database and informatics resource
-
Harris MA, Clark J, Ireland A, Lomax J, Ashburner M, Foulger R, Eilbeck K, Lewis S, Marshall B, Mungall C, Richter J, Rubin GM, Blake JA, Bult C, Dolan M, Drabkin H, Eppig JT, Hill DP, Ni L, Ringwald M, Balakrishnan R, Cherry JM, Christie KR, Costanzo MC, Dwight SS, Engel S, Fisk DG, Hirschman JE, Hong EL, Nash RS, Sethuraman A, Theesfeld CL, Botstein D, Dolinski K, Feierbach B, Berardini T, Mundodi S, Rhee SY, Apweiler R, Barrell D, Camon E, Dimmer E, Lee V, Chisholm R, Gaudet P, Kibbe W, Kishore R, Schwarz EM, Sternberg P, Gwinn M, Hannick L, Wortman J, Berriman M, Wood V, de la Cruz N, Tonellato P, Jaiswal P, Seigfried T, White R (2004) The gene ontology (GO) database and informatics resource. Nucleic Acids Res 32: D258-D261.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Harris, M.A.1
Clark, J.2
Ireland, A.3
Lomax, J.4
Ashburner, M.5
Foulger, R.6
Eilbeck, K.7
Lewis, S.8
Marshall, B.9
Mungall, C.10
Richter, J.11
Rubin, G.M.12
Blake, J.A.13
Bult, C.14
Dolan, M.15
Drabkin, H.16
Eppig, J.T.17
Hill, D.P.18
Ni, L.19
Ringwald, M.20
Balakrishnan, R.21
Cherry, J.M.22
Christie, K.R.23
Costanzo, M.C.24
Dwight, S.S.25
Engel, S.26
Fisk, D.G.27
Hirschman, J.E.28
Hong, E.L.29
Nash, R.S.30
Sethuraman, A.31
Theesfeld, C.L.32
Botstein, D.33
Dolinski, K.34
Feierbach, B.35
Berardini, T.36
Mundodi, S.37
Rhee, S.Y.38
Apweiler, R.39
Barrell, D.40
Camon, E.41
Dimmer, E.42
Lee, V.43
Chisholm, R.44
Gaudet, P.45
Kibbe, W.46
Kishore, R.47
Schwarz, E.M.48
Sternberg, P.49
Gwinn, M.50
Hannick, L.51
Wortman, J.52
Berriman, M.53
Wood, V.54
de la Cruz, N.55
Tonellato, P.56
Jaiswal, P.57
Seigfried, T.58
White, R.59
more..
-
31
-
-
79953114569
-
Mechanisms of glycerophospholipid homeostasis in mammalian cells
-
Hermansson M, Hokynar K, Somerharju P (2011) Mechanisms of glycerophospholipid homeostasis in mammalian cells. Prog Lipid Res 50: 240-257.
-
(2011)
Prog Lipid Res
, vol.50
, pp. 240-257
-
-
Hermansson, M.1
Hokynar, K.2
Somerharju, P.3
-
32
-
-
77955509276
-
Inhibition of Plk1 induces mitotic infidelity and embryonic growth defects in developing zebrafish embryos
-
Jeong K, Jeong JY, Lee HO, Choi E, Lee H (2010) Inhibition of Plk1 induces mitotic infidelity and embryonic growth defects in developing zebrafish embryos. Dev Biol 345: 34-48.
-
(2010)
Dev Biol
, vol.345
, pp. 34-48
-
-
Jeong, K.1
Jeong, J.Y.2
Lee, H.O.3
Choi, E.4
Lee, H.5
-
33
-
-
0347949547
-
Regulation of cell cycle progression by calcium/calmodulin-dependent pathways
-
Kahl CR, Means AR (2003) Regulation of cell cycle progression by calcium/calmodulin-dependent pathways. Endocr Rev 24: 719-736.
-
(2003)
Endocr Rev
, vol.24
, pp. 719-736
-
-
Kahl, C.R.1
Means, A.R.2
-
35
-
-
77955623192
-
A novel kinesin-like protein, Surhe is associated with dorsalization in the zebrafish embryos
-
Kim E-J, Ro H, Huh T-L, Lee CJ, Choi J, Rhee M (2008) A novel kinesin-like protein, Surhe is associated with dorsalization in the zebrafish embryos. Animal Cells Syst 12: 219-230.
-
(2008)
Animal Cells Syst
, vol.12
, pp. 219-230
-
-
Kim, E.-J.1
Ro, H.2
Huh, T.-L.3
Lee, C.J.4
Choi, J.5
Rhee, M.6
-
36
-
-
33745767074
-
Molecular phenotype of zebrafish ovarian follicle by serial analysis of gene expression and proteomic profiling, and comparison with the transcriptomes of other animals
-
Knoll-Gellida A, André M, Gattegno T, Forgue J, Admon A, Babin PJ (2006) Molecular phenotype of zebrafish ovarian follicle by serial analysis of gene expression and proteomic profiling, and comparison with the transcriptomes of other animals. BMC Genomics 7: 46.
-
(2006)
BMC Genomics
, vol.7
, pp. 46
-
-
Knoll-Gellida, A.1
André, M.2
Gattegno, T.3
Forgue, J.4
Admon, A.5
Babin, P.J.6
-
37
-
-
0032488057
-
Activation of the human anaphase-promoting complex by proteins of the CDC20/Fizzy family
-
Kramer ER, Gieffers C, Hölzl G, Hengstschläger M, Peters JM (1998) Activation of the human anaphase-promoting complex by proteins of the CDC20/Fizzy family. Curr Biol 8: 1207-1210.
-
(1998)
Curr Biol
, vol.8
, pp. 1207-1210
-
-
Kramer, E.R.1
Gieffers, C.2
Hölzl, G.3
Hengstschläger, M.4
Peters, J.M.5
-
38
-
-
0035184222
-
Molecular characterization of putative yolk processing enzymes and their expression during oogenesis and embryogenesis in rainbow trout (Oncorhynchus mykiss)
-
Kwon JY, Prat F, Randall C, Tyler CR (2001) Molecular characterization of putative yolk processing enzymes and their expression during oogenesis and embryogenesis in rainbow trout (Oncorhynchus mykiss). Biol Reprod 65: 1701-1709.
-
(2001)
Biol Reprod
, vol.65
, pp. 1701-1709
-
-
Kwon, J.Y.1
Prat, F.2
Randall, C.3
Tyler, C.R.4
-
39
-
-
23444457087
-
Carbohydrate metabolism of eggs of the whitefish, Coregonus spp. during embryogenesis and its relationship with egg quality
-
Lahnsteiner F (2005) Carbohydrate metabolism of eggs of the whitefish, Coregonus spp. during embryogenesis and its relationship with egg quality. Comp Biochem Physiol B 142: 46-55.
-
(2005)
Comp Biochem Physiol B
, vol.142
, pp. 46-55
-
-
Lahnsteiner, F.1
-
40
-
-
0037414604
-
Investigations on the metabolism of viable and nonviable gilthead sea bream (Sparus aurata) eggs
-
Lahnsteiner F, Patarnello P (2003) Investigations on the metabolism of viable and nonviable gilthead sea bream (Sparus aurata) eggs. Aquaculture 223: 159-174.
-
(2003)
Aquaculture
, vol.223
, pp. 159-174
-
-
Lahnsteiner, F.1
Patarnello, P.2
-
41
-
-
0000289673
-
Physiological and biochemical parameters for egg quality determination in lake trout, Salmo trutta lacustris
-
Lahnsteiner F, Weismann T, Patzner RA (1999) Physiological and biochemical parameters for egg quality determination in lake trout, Salmo trutta lacustris. Fish Physiol Biochem 20: 375-388.
-
(1999)
Fish Physiol Biochem
, vol.20
, pp. 375-388
-
-
Lahnsteiner, F.1
Weismann, T.2
Patzner, R.A.3
-
43
-
-
83555172376
-
Biochemical composition and performance of Atlantic cod (Gadus morhua L.) eggs and larvae obtained from farmed and wild broodstocks
-
Lanes CFC, Bizuayehu TT, Bolla S, Martins C, Fernandes JMO, Bianchini A, Kiron V, Babiak I (2012a) Biochemical composition and performance of Atlantic cod (Gadus morhua L.) eggs and larvae obtained from farmed and wild broodstocks. Aquaculture 324-325: 267-275.
-
(2012)
Aquaculture
, vol.324-325
, pp. 267-275
-
-
Lanes, C.F.C.1
Bizuayehu, T.T.2
Bolla, S.3
Martins, C.4
Fernandes, J.M.O.5
Bianchini, A.6
Kiron, V.7
Babiak, I.8
-
44
-
-
84866167048
-
Profiling of key apoptotic, stress, and immune-related transcripts during embryonic and postembryonic development of Atlantic cod (Gadus morhua L.)
-
Lanes CFC, Fernandes JMO, Kiron V, Babiak I (2012b) Profiling of key apoptotic, stress, and immune-related transcripts during embryonic and postembryonic development of Atlantic cod (Gadus morhua L.). Theriogenology 78: 1583-1596.
-
(2012)
Theriogenology
, vol.78
, pp. 1583-1596
-
-
Lanes, C.F.C.1
Fernandes, J.M.O.2
Kiron, V.3
Babiak, I.4
-
46
-
-
30544437719
-
Transcriptome analysis of zebrafish embryogenesis using microarrays
-
Mathavan S, Lee SGP, Mak A, Miller LD, Murthy KRK, Govindarajan KR, Tong Y, Wu YL, Lam SH, Yang H, Ruan Y, Korzh V, Gong Z, Liu ET, Lufkin T (2005) Transcriptome analysis of zebrafish embryogenesis using microarrays. PLoS Genet 1: 260-276.
-
(2005)
PLoS Genet
, vol.1
, pp. 260-276
-
-
Mathavan, S.1
Lee, S.G.P.2
Mak, A.3
Miller, L.D.4
Murthy, K.R.K.5
Govindarajan, K.R.6
Tong, Y.7
Wu, Y.L.8
Lam, S.H.9
Yang, H.10
Ruan, Y.11
Korzh, V.12
Gong, Z.13
Liu, E.T.14
Lufkin, T.15
-
47
-
-
0037327282
-
DNA methylation in animal development
-
Meehan RR (2003) DNA methylation in animal development. Semin Cell Dev Biol 14: 53-65.
-
(2003)
Semin Cell Dev Biol
, vol.14
, pp. 53-65
-
-
Meehan, R.R.1
-
48
-
-
84865422463
-
Exploring the transcriptome of Atlantic salmon (Salmo salar) skin, a major defense organ
-
Micallef G, Bickerdike R, Reiff C, Fernandes JMO, Bowman AS, Martin SAM (2012) Exploring the transcriptome of Atlantic salmon (Salmo salar) skin, a major defense organ. Mar Biotechnol 14: 559-569.
-
(2012)
Mar Biotechnol
, vol.14
, pp. 559-569
-
-
Micallef, G.1
Bickerdike, R.2
Reiff, C.3
Fernandes, J.M.O.4
Bowman, A.S.5
Martin, S.A.M.6
-
49
-
-
77954503905
-
Maternal gene expression in Atlantic halibut (Hippoglossus hippoglossus L.) and its relation to egg quality
-
Mommens M, Fernandes JMO, Bizuayehu TT, Bolla SL, Johnston IA, Babiak I (2010) Maternal gene expression in Atlantic halibut (Hippoglossus hippoglossus L.) and its relation to egg quality. BMC Res Notes 3: 138.
-
(2010)
BMC Res Notes
, vol.3
, pp. 138
-
-
Mommens, M.1
Fernandes, J.M.O.2
Bizuayehu, T.T.3
Bolla, S.L.4
Johnston, I.A.5
Babiak, I.6
-
50
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNA-Seq
-
Mortazavi A, Williams BA, McCue K, Schaeffer L, Wold B (2008) Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat Methods 5: 621-628.
-
(2008)
Nat Methods
, vol.5
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
51
-
-
0242642856
-
Maternal factors in zebrafish development
-
Pelegri F (2003) Maternal factors in zebrafish development. Dev Dyn 228: 535-554.
-
(2003)
Dev Dyn
, vol.228
, pp. 535-554
-
-
Pelegri, F.1
-
52
-
-
33644970016
-
Comparative utility of egg blastomere morphology and lipid biochemistry for prediction of hatching success in Atlantic cod, Gadus morhua L
-
Penney RW, Lush PL, Wade J, Brown JA, Parrish CC, Burton MPM (2006) Comparative utility of egg blastomere morphology and lipid biochemistry for prediction of hatching success in Atlantic cod, Gadus morhua L. Aquacult Res 37: 272-283.
-
(2006)
Aquacult Res
, vol.37
, pp. 272-283
-
-
Penney, R.W.1
Lush, P.L.2
Wade, J.3
Brown, J.A.4
Parrish, C.C.5
Burton, M.P.M.6
-
53
-
-
0037460985
-
TIGR gene indices clustering tools (TGICL): a software system for fast clustering of large EST datasets
-
Pertea G, Huang X, Liang F, Antonescu V, Sultana R, Karamycheva S, Lee Y, White J, Cheung F, Parvizi B, Tsai J, Quackenbush J (2003) TIGR gene indices clustering tools (TGICL): a software system for fast clustering of large EST datasets. Bioinformatics 19: 651-652.
-
(2003)
Bioinformatics
, vol.19
, pp. 651-652
-
-
Pertea, G.1
Huang, X.2
Liang, F.3
Antonescu, V.4
Sultana, R.5
Karamycheva, S.6
Lee, Y.7
White, J.8
Cheung, F.9
Parvizi, B.10
Tsai, J.11
Quackenbush, J.12
-
54
-
-
33749179804
-
Zebra fish Dnmt1 and Suv39h1 regulate organ-specific terminal differentiation during development
-
Rai K, Nadauld LD, Chidester S, Manos EJ, James SR, Karpf AR, Cairns BR, Jones DA (2006) Zebra fish Dnmt1 and Suv39h1 regulate organ-specific terminal differentiation during development. Mol Cell Biol 26: 7077-7085.
-
(2006)
Mol Cell Biol
, vol.26
, pp. 7077-7085
-
-
Rai, K.1
Nadauld, L.D.2
Chidester, S.3
Manos, E.J.4
James, S.R.5
Karpf, A.R.6
Cairns, B.R.7
Jones, D.A.8
-
55
-
-
84857130843
-
An ovary transcriptome for all maturational stages of the striped bass (Morone saxatilis), a highly advanced perciform fish
-
Reading BJ, Chapman RW, Schaff JE, Scholl EH, Opperman CH, Sullivan CV (2012) An ovary transcriptome for all maturational stages of the striped bass (Morone saxatilis), a highly advanced perciform fish. BMC Res Notes 5: 111.
-
(2012)
BMC Res Notes
, vol.5
, pp. 111
-
-
Reading, B.J.1
Chapman, R.W.2
Schaff, J.E.3
Scholl, E.H.4
Opperman, C.H.5
Sullivan, C.V.6
-
56
-
-
0034048515
-
The human polo-like kinase, PLK, regulates cdc2/cyclin B through phosphorylation and activation of the cdc25C phosphate
-
Roshak AK, Capper EA, Imburgia C, Fornwald J, Scott G, Marshall LA (2000) The human polo-like kinase, PLK, regulates cdc2/cyclin B through phosphorylation and activation of the cdc25C phosphate. Cell Signal 12: 405-411.
-
(2000)
Cell Signal
, vol.12
, pp. 405-411
-
-
Roshak, A.K.1
Capper, E.A.2
Imburgia, C.3
Fornwald, J.4
Scott, G.5
Marshall, L.A.6
-
57
-
-
28144462915
-
Egg quality determinants in cod (Gadus morhua L.): egg performance and lipids in eggs from farmed and wild broodstock
-
Salze G, Tocher DR, Roy WJ, Robertson DA (2005) Egg quality determinants in cod (Gadus morhua L.): egg performance and lipids in eggs from farmed and wild broodstock. Aquac Res 36: 1488-1499.
-
(2005)
Aquac Res
, vol.36
, pp. 1488-1499
-
-
Salze, G.1
Tocher, D.R.2
Roy, W.J.3
Robertson, D.A.4
-
58
-
-
84858150876
-
Generation of a reference transcriptome for evaluating rainbow trout responses to various stressors
-
Sánchez CC, Weber GM, Gao G, Cleveland BM, Yao J, Rexroad CE (2011) Generation of a reference transcriptome for evaluating rainbow trout responses to various stressors. BMC Genomics 12: 626.
-
(2011)
BMC Genomics
, vol.12
, pp. 626
-
-
Sánchez, C.C.1
Weber, G.M.2
Gao, G.3
Cleveland, B.M.4
Yao, J.5
Rexroad, C.E.6
-
59
-
-
0013354422
-
The lipids
-
In: Halver JE, Hardy RW (eds), Academic, San Diego
-
Sargent JR, Tocher DR, Bell JG (2002) The lipids. In: Halver JE, Hardy RW (eds) Fish nutrition. Academic, San Diego.
-
(2002)
Fish nutrition
-
-
Sargent, J.R.1
Tocher, D.R.2
Bell, J.G.3
-
60
-
-
51049117528
-
The impact of dietary supplementation with astaxanthin on egg quality in Atlantic cod broodstock
-
Sawanboonchun J, Roy WJ, Robertson DA, Bell JG (2008) The impact of dietary supplementation with astaxanthin on egg quality in Atlantic cod broodstock. Aquaculture 283: 97-101.
-
(2008)
Aquaculture
, vol.283
, pp. 97-101
-
-
Sawanboonchun, J.1
Roy, W.J.2
Robertson, D.A.3
Bell, J.G.4
-
61
-
-
0032197092
-
The cell cycle: a review
-
Schafer KA (1998) The cell cycle: a review. Vet Pathol 35: 461-478.
-
(1998)
Vet Pathol
, vol.35
, pp. 461-478
-
-
Schafer, K.A.1
-
62
-
-
77952869546
-
Composition and regulation of maternal and zygotic transcriptomes reflects species-specific reproductive mode
-
Shen-Orr SS, Pilpel Y, Hunter CP (2010) Composition and regulation of maternal and zygotic transcriptomes reflects species-specific reproductive mode. Genome Biol 11: R58.
-
(2010)
Genome Biol
, vol.11
-
-
Shen-Orr, S.S.1
Pilpel, Y.2
Hunter, C.P.3
-
63
-
-
77951936055
-
The tight junction component claudin E is required for zebrafish epiboly
-
Siddiqui M, Sheikh H, Tran C, Bruce AEE (2010) The tight junction component claudin E is required for zebrafish epiboly. Dev Dyn 239: 715-722.
-
(2010)
Dev Dyn
, vol.239
, pp. 715-722
-
-
Siddiqui, M.1
Sheikh, H.2
Tran, C.3
Bruce, A.E.E.4
-
64
-
-
68249099141
-
The epithelial cell adhesion molecule EpCAM is required for epithelial morphogenesis and integrity during zebrafish epiboly and skin development
-
Slanchev K, Carney TJ, Stemmler MP, Koschorz B, Amsterdam A, Schwarz H, Hammerschmidt M (2009) The epithelial cell adhesion molecule EpCAM is required for epithelial morphogenesis and integrity during zebrafish epiboly and skin development. PLoS Genet 5: e1000563.
-
(2009)
PLoS Genet
, vol.5
-
-
Slanchev, K.1
Carney, T.J.2
Stemmler, M.P.3
Koschorz, B.4
Amsterdam, A.5
Schwarz, H.6
Hammerschmidt, M.7
-
65
-
-
0022978289
-
Differential accumulation of ribonucleotide reductase subunits in clam oocytes: the large subunit is stored as a polypeptide, the small subunit as unstranslated mRNA
-
Standart N, Hunt T, Ruderman JV (1986) Differential accumulation of ribonucleotide reductase subunits in clam oocytes: the large subunit is stored as a polypeptide, the small subunit as unstranslated mRNA. J Cell Biol 103: 2129-2136.
-
(1986)
J Cell Biol
, vol.103
, pp. 2129-2136
-
-
Standart, N.1
Hunt, T.2
Ruderman, J.V.3
-
66
-
-
42949099877
-
EpCAM in morphogenesis
-
Trzpis M, Bremer E, McLaughlin PM, de Leij LF, Harmsen MC (2008) EpCAM in morphogenesis. Front Biosci 13: 5050-5055.
-
(2008)
Front Biosci
, vol.13
, pp. 5050-5055
-
-
Trzpis, M.1
Bremer, E.2
McLaughlin, P.M.3
de Leij, L.F.4
Harmsen, M.C.5
-
67
-
-
0036773738
-
Claudin-based barrier in simple and stratified cellular sheets
-
Tsukita S, Furuse M (2002) Claudin-based barrier in simple and stratified cellular sheets. Curr Opin Cell Biol 14: 531-536.
-
(2002)
Curr Opin Cell Biol
, vol.14
, pp. 531-536
-
-
Tsukita, S.1
Furuse, M.2
-
68
-
-
77955843730
-
Distinct functions of human MVB12A and MVB12B in the ESCRIT-I dependent on their posttranslational modifications
-
Tsunematsu T, Yamauchi E, Shibata H, Maki M, Ohta T, Konishi H (2010) Distinct functions of human MVB12A and MVB12B in the ESCRIT-I dependent on their posttranslational modifications. Biochem Biophys Res Commun 399: 232-237.
-
(2010)
Biochem Biophys Res Commun
, vol.399
, pp. 232-237
-
-
Tsunematsu, T.1
Yamauchi, E.2
Shibata, H.3
Maki, M.4
Ohta, T.5
Konishi, H.6
-
69
-
-
79956290756
-
The zebrafish transcriptome during early development
-
Vesterlund L, Jiao H, Unneberg P, Hovatta O, Kere J (2011) The zebrafish transcriptome during early development. BMC Dev Biol 11: 30.
-
(2011)
BMC Dev Biol
, vol.11
, pp. 30
-
-
Vesterlund, L.1
Jiao, H.2
Unneberg, P.3
Hovatta, O.4
Kere, J.5
-
70
-
-
33646871272
-
Control of cell migration in the zebrafish lateral line: implication of the gene "tumour-associated calcium signal transducer," tacstd
-
Villablanca EJ, Renucci A, Sapède D, Lec V, Soubiran F, Sandoval PC, Dambly-Chaudière C, Ghysen A, Allende ML (2006) Control of cell migration in the zebrafish lateral line: implication of the gene "tumour-associated calcium signal transducer," tacstd. Dev Dyn 235: 1578-1588.
-
(2006)
Dev Dyn
, vol.235
, pp. 1578-1588
-
-
Villablanca, E.J.1
Renucci, A.2
Sapède, D.3
Lec, V.4
Soubiran, F.5
Sandoval, P.C.6
Dambly-Chaudière, C.7
Ghysen, A.8
Allende, M.L.9
-
71
-
-
69449099392
-
Comparison of next generation sequencing technologies for transcriptome characterization
-
Wall PK, Leebens-Mack J, Chanderbali AS, Barakat A, Wolcott E, Liang H, Landherr L, Tomsho LP, Hu Y, Carlson JE, Ma H, Schuster SC, Soltis DE, Soltis PS, Altman N, dePamphilis CW (2009) Comparison of next generation sequencing technologies for transcriptome characterization. BMC Genomics 10: 347.
-
(2009)
BMC Genomics
, vol.10
, pp. 347
-
-
Wall, P.K.1
Leebens-Mack, J.2
Chanderbali, A.S.3
Barakat, A.4
Wolcott, E.5
Liang, H.6
Landherr, L.7
Tomsho, L.P.8
Hu, Y.9
Carlson, J.E.10
Ma, H.11
Schuster, S.C.12
Soltis, D.E.13
Soltis, P.S.14
Altman, N.15
dePamphilis, C.W.16
-
72
-
-
84885960982
-
Fbos, a novel oocyte-specific protein, interacts with proteins important for oocyte development in rainbow trout (Oncorhynchus mykiss)
-
Wang L, Tripurani S, Wanna W, Rexroad CE, Yao J (2010) Fbos, a novel oocyte-specific protein, interacts with proteins important for oocyte development in rainbow trout (Oncorhynchus mykiss). Biol Reprod 83: 410.
-
(2010)
Biol Reprod
, vol.83
, pp. 410
-
-
Wang, L.1
Tripurani, S.2
Wanna, W.3
Rexroad, C.E.4
Yao, J.5
-
73
-
-
77955487334
-
Deep sequencing-based transcriptome profiling analysis of bacteria-challenged Lateolabrax japonicus reveals insight into the immune-relevant genes in marine fish
-
Xiang L, He D, Dong W, Zhang Y, Shao J (2010) Deep sequencing-based transcriptome profiling analysis of bacteria-challenged Lateolabrax japonicus reveals insight into the immune-relevant genes in marine fish. BMC Genomics 11: 472.
-
(2010)
BMC Genomics
, vol.11
, pp. 472
-
-
Xiang, L.1
He, D.2
Dong, W.3
Zhang, Y.4
Shao, J.5
-
74
-
-
78149493435
-
Mining the bitter melon (Momordica charantia L.) seed transcriptome by 454 analysis of non-normalized and normalized cDNA populations for conjugated fatty acid metabolism-related genes
-
Yang P, Li X, Shipp MJ, Shockey JM, Cahoon EB (2010) Mining the bitter melon (Momordica charantia L.) seed transcriptome by 454 analysis of non-normalized and normalized cDNA populations for conjugated fatty acid metabolism-related genes. BMC Plant Biol 10: 250.
-
(2010)
BMC Plant Biol
, vol.10
, pp. 250
-
-
Yang, P.1
Li, X.2
Shipp, M.J.3
Shockey, J.M.4
Cahoon, E.B.5
-
75
-
-
0037191929
-
Cooperative phosphorylation including the activity of polo-like kinase 1 regulates the subcellular localization of cyclin B1
-
Yuan J, Eckerdt F, Bereiter-Hahn J, Kurunci-Csacsko E, Kaufmann M, Strebhardt K (2002) Cooperative phosphorylation including the activity of polo-like kinase 1 regulates the subcellular localization of cyclin B1. Oncogene 21: 8282-8292.
-
(2002)
Oncogene
, vol.21
, pp. 8282-8292
-
-
Yuan, J.1
Eckerdt, F.2
Bereiter-Hahn, J.3
Kurunci-Csacsko, E.4
Kaufmann, M.5
Strebhardt, K.6
-
76
-
-
84862495884
-
Transcriptomic characterization of the larval stage in gilthead seabream (Sparus aurata) by 454 pyrosequencing
-
Yúfera M, Halm S, Beltran S, Fusté B, Planas JV, Martínez-Rodríguez G (2012) Transcriptomic characterization of the larval stage in gilthead seabream (Sparus aurata) by 454 pyrosequencing. Mar Biotechnol 14: 423-435.
-
(2012)
Mar Biotechnol
, vol.14
, pp. 423-435
-
-
Yúfera, M.1
Halm, S.2
Beltran, S.3
Fusté, B.4
Planas, J.V.5
Martínez-Rodríguez, G.6
|