The PmNAC1 gene is induced by auxin and expressed in differentiating vascular cells in callus cultures of Passiflora

Plant Cell, Tissue and Organ Culture

Volumn 115, Issue 2, 2013, Pages 275-283

  Rosa, Yara Brito Chaim Jardim ^a   Aizza, Lílian Cristina Baldon ^b   Bello, Carolina Cassano Monte ^b   Dornelas, Marcelo Carnier ^b  

^a UNIVERSIDADE FEDERAL DA GRANDE DOURADOS   (Brazil)

^b UNIVERSITY OF CAMPINAS   (Brazil)

Author keywords

Auxin; Callus; Differential gene expression; In vitro culture; Wild passionfruit; Xylem vessel differentiation

Indexed keywords

AUXIN; CALLUS; DIFFERENTIAL GENE EXPRESSIONS; IN-VITRO; WILD PASSIONFRUIT; XYLEM VESSELS;

GENE ENCODING; TRANSCRIPTION; TRANSCRIPTION FACTORS;

PLANTS (BOTANY);

PASSIFLORA; PASSIFLORA MORIFOLIA; PASSIFLORA SUBEROSA;

EID: 84885947910     PISSN: 01676857     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11240-013-0360-9     Document Type: Article

References (36)

1. Aida M, Ishida T, Fukaki H, Fujisawa H, Tasaka M (1997) Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant. Plant Cell 9: 841-857.
2. Aida M, Ishida T, Tasaka M (1999) Shoot apical meristem and cotyledon formation during Arabidopsis embryogenesis: interaction among the CUP-SHAPED COTYLEDON and SHOOT MERISTEMLESS genes. Development 126: 1563-1570.
3. Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
4. Cary AJ, Che P, Howell SH (2002) Developmental events and shoot apical meristem gene expression patterns during shoot development in Arabidopsis thaliana. Plant J 32: 867-877.
5. Cutri L, Dornelas MC (2012) PASSIOMA: exploring expressed sequence tags during flower development in Passiflora spp. Comp Funct Genomics 2012: 510549.
6. Demura T, Fukuda H (2007) Transcriptional regulation in wood formation. Trends Plant Sci 12: 64-70.
7. Dornelas MC, Vieira MLC (1994) Tissue culture of species of Passiflora. Plant Cell Tiss Organ Cult 36: 211-217.
8. Dornelas MC, van Lammeren AA, Kreis M (2000) Arabidopsis thaliana SHAGGY-related protein kinases (AtSK11 and 12) function in perianth and gynoecium development. Plant J 21: 419-429.
9. Dornelas MC, Tsai SM, Rodriguez APM (2006) Expressed sequence tags of genes involved in the flowering process of Passiflora spp. In: da Silva JAT (ed) Floriculture ornamental and plant biotechnology. Global Science Books, London, pp 483-488.
10. Finn RD, Mistry J, Tate J, Coggill P, Heger A, Pollington JE, Gavin OL, Gunasekaran P, Ceric G, Forslund K, Holm L, Sonnhammer EL, Eddy SR, Bateman A (2010) The Pfam protein families database. Nucleic Acids Res 38(Database issue): D211-D222.
11. Fukuda H (1997) Tracheary element differentiation. Plant Cell 9: 1147-1156.
12. Gao F, Xiong A, Peng R, Jin Z, Xu J, Zhu B, Chen J, Yao Q (2010) OsNAC52, a rice NAC transcription factor, potentially responds to ABA and confers drought tolerance in transgenic plants. Plant Cell Tiss Organ Cult 100: 255-262.
13. Gordon SP, Heisler MG, Venugopala-Reddy G, Ohno C, Das P, Meyerowitz EM (2007) Pattern formation during de novo assembly of the Arabidopsis shoot meristem. Development 134: 3539-3548.
14. Grant EH, Fujino T, Beers EP, Brunner AM (2010) Characterization of NAC domain transcription factors implicated in control of vascular cell differentiation in Arabidopsis and Populus. Planta 232: 337-352.
15. Huang X, Madan A (1999) CAP3: a DNA sequence assembly program. Genome Res 9: 868-877.
16. Ishida T, Aida M, Takada S, Tasaka M (2000) Involvement of CUP-SHAPED COTYLEDON genes in gynoecium and ovule development in Arabidopsis thaliana. Plant Cell Physiol 41: 60-67.
17. Jensen MK, Kjaersgaard T, Nielsen M, Galberg P, Petersen K, O'Shea C, Skriver K (2010) The Arabidopsis thaliana NAC transcription factor family: structure-function relationships and determinants of ANAC019 stress signaling. Biochem J 426: 183-196.
18. Ko J-H, Yang SH, Park AH, Lerouxel O, Han K-H (2007) ANAC012, a member of the plant-specific NAC transcription factor family, negatively regulates xylary fiber development in Arabidopsis thaliana. Plant J 50: 1035-1048.
19. Kubo M, Udagawa M, Nishikubo N, Horiguchi G, Yamaguchi M, Ito J, Mimura T, Fukuda H, Demura T (2005) Transcription switches for protoxylem and metaxylem vessel formation. Genes Dev 16: 1855-1860.
20. McCarthy RL, Zhong R, Ye Z-H (2011) Secondary wall NAC binding element (SSNBE), a key cis-acting element required for target gene activation by secondary wall NAC master witches. Plant Signal Behav 6: 1282-11285.
21. Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol Plant 15: 473-497.
22. Ooka H, Satoh K, Doi K, Nagata T, Otomo Y, Murakami K, Matsubara K, Osato N, Kawai J, Carninci P, Hayashizaki Y, Suzuki K, Kojima K, Takahara Y, Yamamoto K, Kikuchi S (2003) Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana. DNA Res 10: 239-247.
23. Page RDM (1996) Treeview: an application to display phylogenetic trees on personal computers. Comp Appl Biosci 12: 357-358.
24. Prashant S, Sunita MSL, Sirisha VL, Bhaskar VV, Rao AM, Narasu ML, Kishor PBK (2012) Isolation of cinnamoyl CoA reductase and cinnamyl alcohol dehydrogenase gene promoters from Leucaena leucocephala, a leguminous tree species, and characterization of tissue-specific activity in transgenic tobacco. Plant Cell Tiss Organ Cult 108: 421-436.
25. Rechsteiner M, Rogers SW (1996) PEST sequences and regulation by proteolysis. Trends Biochem Sci 21: 267-271.
26. Roberts K, McCann MC (2000) Xylogenesis: the birth of a corpse. Curr Opin Plant Biol 3: 517-522.
27. Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
28. Souer E, von Houwelingen A, Kloos D, Mol J, Koes R (1996) The No Apical Meristem gene of Petunia is required for pattern formation in embryos and flowers and is expressed at meristem and primordia boundaries. Cell 85: 159-170.
29. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
30. Xie Q, Frugis G, Colgan D, Chua NH (2000) Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development. Gene Dev 14: 3024-3036.
31. Yamaguchi M, Demura T (2010) Transcriptional regulation of secondary wall formation controlled by NAC domain proteins. Plant Biotechnol 27: 237-242.
32. Yamaguchi M, Kubo M, Fukuda H, Demura T (2008) Vascular-related NAC-DOMAIN7 is involved in the differentiation of all types of xylem vessels in Arabidopsis roots and shoots. Plant J 55: 652-664.
33. Yamaguchi M, Ohtani M, Mitsuda N, Kubo M, Ohme-Takagi M, Fukuda H, Demura T (2010) VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis. Plant Cell 22: 1249-1263.
34. Zhao P, Wang W, Sun M (2011) Characterization and expression pattern analysis of DcNAC gene in somatic embryos of Dendrobium candidum Wall Ex Lindl. Plant Cell Tiss Organ Cult 107: 151-159.
35. Zhong R, Lee C, Ye Z-H (2010) Evolutionary conservation of the transcriptional network regulating secondary cell wall biosynthesis. Trends Plant Sci 15: 625-632.
36. Zhu T, Nevo E, Sun D, Peng J (2012) Phylogenetic analyses unravel the evolutionary history of NAC proteins in plants. Evolution 66: 1833-1848.