메뉴 건너뛰기




Volumn 66, Issue 6, 2012, Pages 1833-1848

Phylogenetic analyses unravel the evolutionary history of nac proteins in plants

Author keywords

Angiosperm; NAC; Phylogenetic analysis; Transcription factors

Indexed keywords

TRANSCRIPTION FACTOR; VEGETABLE PROTEIN;

EID: 84861670540     PISSN: 00143820     EISSN: 15585646     Source Type: Journal    
DOI: 10.1111/j.1558-5646.2011.01553.x     Document Type: Article
Times cited : (92)

References (108)
  • 1
    • 18744382506 scopus 로고    scopus 로고
    • ProtTest: selection of best-fit models of protein evolution
    • Abascal, F., R. Zardoya, and D. Posada 2005. ProtTest: selection of best-fit models of protein evolution. Bioinformatics 21:2104-2105.
    • (2005) Bioinformatics , vol.21 , pp. 2104-2105
    • Abascal, F.1    Zardoya, R.2    Posada, D.3
  • 2
    • 0031153960 scopus 로고    scopus 로고
    • Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant
    • Aida, M., T. Ishida, H. Fukaki, H. Fujisawa, and M. Tasaka 1997. Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant. Plant Cell 9:841-857.
    • (1997) Plant Cell , vol.9 , pp. 841-857
    • Aida, M.1    Ishida, T.2    Fukaki, H.3    Fujisawa, H.4    Tasaka, M.5
  • 3
    • 26444441397 scopus 로고    scopus 로고
    • Dating phylogenetically basal eudicots using rbcL sequences and multiple fossil reference points
    • Anderson, C. L., K. Bremer, and E. M. Friis 2005. Dating phylogenetically basal eudicots using rbcL sequences and multiple fossil reference points. Am. J. Bot. 92:1737-1748.
    • (2005) Am. J. Bot. , vol.92 , pp. 1737-1748
    • Anderson, C.L.1    Bremer, K.2    Friis, E.M.3
  • 4
    • 0028685490 scopus 로고
    • Fitting a mixture model by expectation maximization to discover motifs in biopolymers
    • Bailey, T. L., and C. Elkan 1994. Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc. Int. Conf. Intell. Syst. Mol. Biol. 2:28-36.
    • (1994) Proc. Int. Conf. Intell. Syst. Mol. Biol. , vol.2 , pp. 28-36
    • Bailey, T.L.1    Elkan, C.2
  • 6
    • 54149092976 scopus 로고    scopus 로고
    • Multiple paleopolyploidizations during the evolution of the compositae reveal parallel patterns of duplicate gene retention after millions of years
    • Barker, M. S., N. C. Kane, M. Matvienko, A. Kozik, R. W. Michelmore, S. J. Knapp, and L. H. Rieseberg 2008. Multiple paleopolyploidizations during the evolution of the compositae reveal parallel patterns of duplicate gene retention after millions of years. Mol. Biol. Evol. 25:2445-2455.
    • (2008) Mol. Biol. Evol. , vol.25 , pp. 2445-2455
    • Barker, M.S.1    Kane, N.C.2    Matvienko, M.3    Kozik, A.4    Michelmore, R.W.5    Knapp, S.J.6    Rieseberg, L.H.7
  • 8
    • 46749097571 scopus 로고    scopus 로고
    • Role of the Arabidopsis thaliana NAC transcription factors ANAC019 and ANAC055 in regulating jasmonic acid-signaled defense responses
    • Bu, Q., H. Jiang, C. B. Li, Q. Zhai, J. Zhang, X. Wu, J. Sun, Q. Xie, and C. Li 2008. Role of the Arabidopsis thaliana NAC transcription factors ANAC019 and ANAC055 in regulating jasmonic acid-signaled defense responses. Cell Res. 18:756-767.
    • (2008) Cell Res. , vol.18 , pp. 756-767
    • Bu, Q.1    Jiang, H.2    Li, C.B.3    Zhai, Q.4    Zhang, J.5    Wu, X.6    Sun, J.7    Xie, Q.8    Li, C.9
  • 9
    • 2942620598 scopus 로고    scopus 로고
    • The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana
    • Cannon, S. B., A. Mitra, A. Baumgarten, N. D. Young, and G. May 2004. The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana. BMC Plant Biol. 4:10.
    • (2004) BMC Plant Biol. , vol.4 , pp. 10
    • Cannon, S.B.1    Mitra, A.2    Baumgarten, A.3    Young, N.D.4    May, G.5
  • 11
    • 65249102713 scopus 로고    scopus 로고
    • The low-oxygen-induced NAC domain transcription factor ANAC102 affects viability of Arabidopsis seeds following low-oxygen treatment
    • Christianson, J. A., I. W. Wilson, D. J. Llewellyn, and E. S. Dennis 2009. The low-oxygen-induced NAC domain transcription factor ANAC102 affects viability of Arabidopsis seeds following low-oxygen treatment. Plant Physiol. 149:1724-1738.
    • (2009) Plant Physiol. , vol.149 , pp. 1724-1738
    • Christianson, J.A.1    Wilson, I.W.2    Llewellyn, D.J.3    Dennis, E.S.4
  • 12
    • 0037446946 scopus 로고    scopus 로고
    • Structure of the GCM domain-DNA complex: a DNA-binding domain with a novel fold and mode of target site recognition
    • Cohen, S. X., M. Moulin, S. Hashemolhosseini, K. Kilian, M. Wegner, and C. W. Müller 2003. Structure of the GCM domain-DNA complex: a DNA-binding domain with a novel fold and mode of target site recognition. EMBO J. 22:1835-1845.
    • (2003) EMBO J. , vol.22 , pp. 1835-1845
    • Cohen, S.X.1    Moulin, M.2    Hashemolhosseini, S.3    Kilian, K.4    Wegner, M.5    Müller, C.W.6
  • 13
    • 0034903865 scopus 로고    scopus 로고
    • Differential induction of two potato genes, Stprx2 and StNAC, in response to infection by Phytophthora infestans and to wounding
    • Collinge, M., and T. Boller 2001. Differential induction of two potato genes, Stprx2 and StNAC, in response to infection by Phytophthora infestans and to wounding. Plant Mol. Biol. 46:521-529.
    • (2001) Plant Mol. Biol , vol.46 , pp. 521-529
    • Collinge, M.1    Boller, T.2
  • 15
  • 16
    • 33846934729 scopus 로고    scopus 로고
    • Transcriptional regulation in wood formation
    • Demura, T., and H. Fukuda 2007. Transcriptional regulation in wood formation. Trends Plant Sci. 12:64-70.
    • (2007) Trends Plant Sci. , vol.12 , pp. 64-70
    • Demura, T.1    Fukuda, H.2
  • 17
    • 0036720107 scopus 로고    scopus 로고
    • Molecular characterization of AtNAM: a member of the Arabidopsis NAC domain superfamily
    • Duval, M., T. Hsieh, S. Y. Kim, and T. L. Thomas 2002. Molecular characterization of AtNAM: a member of the Arabidopsis NAC domain superfamily. Plant Mol. Biol. 50:237-248.
    • (2002) Plant Mol. Biol. , vol.50 , pp. 237-248
    • Duval, M.1    Hsieh, T.2    Kim, S.Y.3    Thomas, T.L.4
  • 18
    • 0031743421 scopus 로고    scopus 로고
    • Profile hidden Markov models
    • Eddy, S. R. 1998. Profile hidden Markov models. Bioinformatics 14:755-763.
    • (1998) Bioinformatics , vol.14 , pp. 755-763
    • Eddy, S.R.1
  • 19
    • 4544294517 scopus 로고    scopus 로고
    • Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
    • Ernst, H. A., A. N. Olsen, K. Skriver, S. Larsen, and L. L. Leggio 2004. Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors. EMBO Rep. 5:297-303.
    • (2004) EMBO Rep. , vol.5 , pp. 297-303
    • Ernst, H.A.1    Olsen, A.N.2    Skriver, K.3    Larsen, S.4    Leggio, L.L.5
  • 21
    • 56449090054 scopus 로고    scopus 로고
    • Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice
    • Fang, Y., J. You, K. Xie, W. Xie, and L. Xiong 2008. Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice. Mol. Genet. Genomics. 280:547-563.
    • (2008) Mol. Genet. Genomics. , vol.280 , pp. 547-563
    • Fang, Y.1    You, J.2    Xie, K.3    Xie, W.4    Xiong, L.5
  • 22
    • 0000122573 scopus 로고
    • PHYLIP-Phylogeny Inference Package (version 3.6.9).
    • Felsenstein, J. 1989. PHYLIP-Phylogeny Inference Package (version 3.6.9). Cladistics 5:164-166.
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 25
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon, S., and O. Gascuel 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52:696-704.
    • (2003) Syst. Biol. , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 27
    • 4444301196 scopus 로고    scopus 로고
    • Phylogenetic profiling of the Arabidopsis thaliana proteome: what proteins distinguish plants from other organisms?
    • Gutierrez, R. A., P. J. Green, K. Keegstra, and J. B. Ohlrogge 2004. Phylogenetic profiling of the Arabidopsis thaliana proteome: what proteins distinguish plants from other organisms? Genome Biol. 5:R53.
    • (2004) Genome Biol , vol.5
    • Gutierrez, R.A.1    Green, P.J.2    Keegstra, K.3    Ohlrogge, J.B.4
  • 28
    • 32344446535 scopus 로고    scopus 로고
    • AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development
    • He, X. J., R. L. Mu, W. H. Cao, Z. G. Zhang, J. S. Zhang, and S. Y. Chen 2005. AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development. Plant J. 44:903-916.
    • (2005) Plant J. , vol.44 , pp. 903-916
    • He, X.J.1    Mu, R.L.2    Cao, W.H.3    Zhang, Z.G.4    Zhang, J.S.5    Chen, S.Y.6
  • 29
    • 0347930304 scopus 로고    scopus 로고
    • Molecular characterization of Brassica napus NAC domain transcriptional activators induced in response to biotic and abiotic stress
    • Hegedus, D., M. Yu, D. Baldwin, M. Gruber, A. Sharpe, I. Parkin, S. Whitwill, and D. Lydiate 2003. Molecular characterization of Brassica napus NAC domain transcriptional activators induced in response to biotic and abiotic stress. Plant Mol. Biol. 53:383-397.
    • (2003) Plant Mol. Biol. , vol.53 , pp. 383-397
    • Hegedus, D.1    Yu, M.2    Baldwin, D.3    Gruber, M.4    Sharpe, A.5    Parkin, I.6    Whitwill, S.7    Lydiate, D.8
  • 30
    • 33748364557 scopus 로고    scopus 로고
    • Over expressing a NAM, ATAF, and CUC (NAC) transcription factor enhances drought resistance and salt tolerance in rice
    • Hu, H., M. Dai, J. Yao, B. Xiao, X. Li, Q. Zhang, and L. Xiong 2006. Over expressing a NAM, ATAF, and CUC (NAC) transcription factor enhances drought resistance and salt tolerance in rice. Proc. Natl. Acad. Sci. USA 103:12987-12992.
    • (2006) Proc. Natl. Acad. Sci. USA , vol.103 , pp. 12987-12992
    • Hu, H.1    Dai, M.2    Yao, J.3    Xiao, B.4    Li, X.5    Zhang, Q.6    Xiong, L.7
  • 31
    • 42149099961 scopus 로고    scopus 로고
    • Characterization of transcription factor gene SNAC2 conferring cold and salt tolerance in rice
    • Hu, H., J. You, Y. Fang, X. Zhu, Z. Qi, and L. Xiong 2008. Characterization of transcription factor gene SNAC2 conferring cold and salt tolerance in rice. Plant Mol. Biol. 67:169-181.
    • (2008) Plant Mol. Biol. , vol.67 , pp. 169-181
    • Hu, H.1    You, J.2    Fang, Y.3    Zhu, X.4    Qi, Z.5    Xiong, L.6
  • 32
    • 79959917570 scopus 로고    scopus 로고
    • Comprehensive analysis of NAC domain transcription factor gene family in Populus trichocarpa
    • Hu, R., G. Qi, Y. Kong, Q. Gao, and G. Zhou 2010. Comprehensive analysis of NAC domain transcription factor gene family in Populus trichocarpa. BMC Plant Biol. 10:145.
    • (2010) BMC Plant Biol. , vol.10 , pp. 145
    • Hu, R.1    Qi, G.2    Kong, Y.3    Gao, Q.4    Zhou, G.5
  • 34
    • 77951992284 scopus 로고    scopus 로고
    • Root-specific expression of OsNAC10 improves drought tolerance and grain yield in rice under field drought conditions
    • Jeong, J. S., Y. S. Kim, K. H. Baek, H. Jung, S. H. Ha, Y. Do Choi, M. Kim, C. Reuzeau, and J. K. Kim 2010. Root-specific expression of OsNAC10 improves drought tolerance and grain yield in rice under field drought conditions. Plant Physiol. 153:185-197.
    • (2010) Plant Physiol. , vol.153 , pp. 185-197
    • Jeong, J.S.1    Kim, Y.S.2    Baek, K.H.3    Jung, H.4    Ha, S.H.5    Do Choi, Y.6    Kim, M.7    Reuzeau, C.8    Kim, J.K.9
  • 36
    • 37849021330 scopus 로고    scopus 로고
    • Genome-wide analysis of Aux/IAA and ARF gene families in Populus trichocarpa
    • Kalluri, U. C., S. P. Difazio, A. M. Brunner, and G. A. Tuskan 2007. Genome-wide analysis of Aux/IAA and ARF gene families in Populus trichocarpa. BMC Plant Biol. 7:59.
    • (2007) BMC Plant Biol. , vol.7 , pp. 59
    • Kalluri, U.C.1    Difazio, S.P.2    Brunner, A.M.3    Tuskan, G.A.4
  • 37
    • 65449150859 scopus 로고    scopus 로고
    • The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death
    • Kaneda, T., Y. Taga, R. Takai, M. Iwano, H. Matsui, S. Takayama, A. Isogai, and F. S. Che 2009. The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death. EMBO J. 28:926-936.
    • (2009) EMBO J , vol.28 , pp. 926-936
    • Kaneda, T.1    Taga, Y.2    Takai, R.3    Iwano, M.4    Matsui, H.5    Takayama, S.6    Isogai, A.7    Che, F.S.8
  • 38
    • 77949654292 scopus 로고    scopus 로고
    • Over expression of the NAC transcription factor family gene ANAC036 results in a dwarf phenotype in Arabidopsis thaliana
    • Kato, H., T. Motomura, Y. Komeda, T. Saito, and A. Kato 2010. Over expression of the NAC transcription factor family gene ANAC036 results in a dwarf phenotype in Arabidopsis thaliana. J. Plant Physiol. 167:571-577.
    • (2010) J. Plant Physiol. , vol.167 , pp. 571-577
    • Kato, H.1    Motomura, T.2    Komeda, Y.3    Saito, T.4    Kato, A.5
  • 39
    • 0030885968 scopus 로고    scopus 로고
    • The origin and early evolution of plants on land
    • Kenrick, P., and P. Crane 1997. The origin and early evolution of plants on land. Nature 389:33-39.
    • (1997) Nature , vol.389 , pp. 33-39
    • Kenrick, P.1    Crane, P.2
  • 41
    • 33845785970 scopus 로고    scopus 로고
    • A membrane-bound NAC transcription factor regulates cell division in Arabidopsis
    • Kim, Y. S., S. G. Kim, J. E. Park, H. Y. Park, M. H. Lim, N. H. Chua, and C. M. Park 2006. A membrane-bound NAC transcription factor regulates cell division in Arabidopsis. Plant Cell. 18:3132-3144.
    • (2006) Plant Cell. , vol.18 , pp. 3132-3144
    • Kim, Y.S.1    Kim, S.G.2    Park, J.E.3    Park, H.Y.4    Lim, M.H.5    Chua, N.H.6    Park, C.M.7
  • 43
    • 34447117526 scopus 로고    scopus 로고
    • A membrane-associated NAC transcription factor regulates salt-responsive flowering via FLOWERING LOCUS T in Arabidopsis
    • Kim, S. G., S. Y. Kim, and C. M. Park 2007. A membrane-associated NAC transcription factor regulates salt-responsive flowering via FLOWERING LOCUS T in Arabidopsis. Planta 226:647-654.
    • (2007) Planta , vol.226 , pp. 647-654
    • Kim, S.G.1    Kim, S.Y.2    Park, C.M.3
  • 44
    • 33846673070 scopus 로고    scopus 로고
    • Exploring membrane-associated NAC transcription factors in Arabidopsis: implications for membrane biology in genome regulation
    • Kim, S. Y., S. G. Kim, Y. S. Kim, P. J. Seo, M. Bae, H. K. Yoon, and C. M. Park 2007. Exploring membrane-associated NAC transcription factors in Arabidopsis: implications for membrane biology in genome regulation. Nucleic Acids Res. 35:203-213.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 203-213
    • Kim, S.Y.1    Kim, S.G.2    Kim, Y.S.3    Seo, P.J.4    Bae, M.5    Yoon, H.K.6    Park, C.M.7
  • 45
    • 47249152410 scopus 로고    scopus 로고
    • A membrane-bound NAC transcription factor NTL8 regulates gibberellic acid-mediated salt signaling in Arabidopsis seed germination
    • Kim, S. G., A. K. Lee, H. K. Yoon, and C. M. Park 2008. A membrane-bound NAC transcription factor NTL8 regulates gibberellic acid-mediated salt signaling in Arabidopsis seed germination. Plant J. 55:77-88.
    • (2008) Plant J. , vol.55 , pp. 77-88
    • Kim, S.G.1    Lee, A.K.2    Yoon, H.K.3    Park, C.M.4
  • 46
    • 72049122661 scopus 로고    scopus 로고
    • Genome-scale screening and molecular characterization of membrane-bound transcription factors in Arabidopsis and rice
    • Kim, S. G., S. Lee, P. J. Seo, S. K. Kim, J. K. Kim, and C. M. Park 2010. Genome-scale screening and molecular characterization of membrane-bound transcription factors in Arabidopsis and rice. Genomics 95:56-65.
    • (2010) Genomics , vol.95 , pp. 56-65
    • Kim, S.G.1    Lee, S.2    Seo, P.J.3    Kim, S.K.4    Kim, J.K.5    Park, C.M.6
  • 47
    • 34249774567 scopus 로고    scopus 로고
    • Patterns of gene duplication in the plant SKP1 gene family in angiosperms: evidence for multiple mechanisms of rapid gene birth
    • Kong, H., L. L. Landherr, M. W. Frohlich, J. Leebens-Mack, H. Ma, and C. W. dePamphilis 2007. Patterns of gene duplication in the plant SKP1 gene family in angiosperms: evidence for multiple mechanisms of rapid gene birth. Plant J. 50:873-885.
    • (2007) Plant J. , vol.50 , pp. 873-885
    • Kong, H.1    Landherr, L.L.2    Frohlich, M.W.3    Leebens-Mack, J.4    Ma, H.5    dePamphilis, C.W.6
  • 50
    • 67649093017 scopus 로고    scopus 로고
    • Expression pattern divergence of duplicated genes in rice
    • SUPPL.
    • Li, Z., H. Zhang, S. Ge, X. Gu, G. Gao, and J. Luo 2009. Expression pattern divergence of duplicated genes in rice. BMC Bioinform. 10(SUPPL. 6): S8.
    • (2009) BMC Bioinform. , vol.10 , Issue.6
    • Li, Z.1    Zhang, H.2    Ge, S.3    Gu, X.4    Gao, G.5    Luo, J.6
  • 51
    • 33846065315 scopus 로고    scopus 로고
    • A novel drought-inducible gene, ATAF1, encodes a NAC family protein that negatively regulates the expression of stress-responsive genes in Arabidopsis
    • Lu, P. L., N. Z. Chen, R. An, Z. Su, B. S. Qi, F. Ren, J. Chen, and X. C. Wang 2007. A novel drought-inducible gene, ATAF1, encodes a NAC family protein that negatively regulates the expression of stress-responsive genes in Arabidopsis. Plant Mol. Biol. 63:289-305.
    • (2007) Plant Mol. Biol. , vol.63 , pp. 289-305
    • Lu, P.L.1    Chen, N.Z.2    An, R.3    Su, Z.4    Qi, B.S.5    Ren, F.6    Chen, J.7    Wang, X.C.8
  • 52
    • 17244368487 scopus 로고    scopus 로고
    • Modeling gene and genome duplications in eukaryotes. Proc. Natl. Acad. Sci. USA.
    • Maere, S., S. De Bodt, J. Raes, T. Casneuf, M. Van Montagu, M. Kuiper, and Y. Van de Peer 2005. Modeling gene and genome duplications in eukaryotes. Proc. Natl. Acad. Sci. USA. 102: 5454-5459.
    • (2005) , vol.102 , pp. 5454-5459
    • Maere, S.1    De Bodt, S.2    Raes, J.3    Casneuf, T.4    Montagu, M.V.5    Kuiper, M.6    Peer, Y.V.d.7
  • 53
    • 2942697259 scopus 로고    scopus 로고
    • MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs
    • Mallory, A. C., D. V. Dugas, D. P. Bartel, and B. Bartel 2004. MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs. Curr. Biol. 14:1035-1046.
    • (2004) Curr. Biol. , vol.14 , pp. 1035-1046
    • Mallory, A.C.1    Dugas, D.V.2    Bartel, D.P.3    Bartel, B.4
  • 54
    • 34748890557 scopus 로고    scopus 로고
    • Over expression of a NAC-domain protein promotes shoot branching in rice
    • Mao, C., W. Ding, Y. Wu, J. Yu, X. He, H. Shou, and P. Wu 2007. Over expression of a NAC-domain protein promotes shoot branching in rice. New Phytol. 176:288-298.
    • (2007) New Phytol. , vol.176 , pp. 288-298
    • Mao, C.1    Ding, W.2    Wu, Y.3    Yu, J.4    He, X.5    Shou, H.6    Wu, P.7
  • 57
    • 33645050152 scopus 로고    scopus 로고
    • The NAC transcription factors NST1 and NST2 of Arabidopsis regulate secondary wall thickenings and are required for anther dehiscence
    • Mitsuda, N., M. Seki, K. Shinozaki, and M. Ohme-Takagia 2005. The NAC transcription factors NST1 and NST2 of Arabidopsis regulate secondary wall thickenings and are required for anther dehiscence. Plant Cell. 17:2993-3006.
    • (2005) Plant Cell. , vol.17 , pp. 2993-3006
    • Mitsuda, N.1    Seki, M.2    Shinozaki, K.3    Ohme-Takagia, M.4
  • 58
    • 34247350741 scopus 로고    scopus 로고
    • NAC transcription factors, NST1 and NST3, are key regulators of the formation of secondary walls in woody tissues of Arabidopsis
    • Mitsuda, N., A. Iwase, H. Yamamoto, M. Yoshida, M. Seki, K. Shinozaki, and M. Ohme-Takagi 2007. NAC transcription factors, NST1 and NST3, are key regulators of the formation of secondary walls in woody tissues of Arabidopsis. Plant Cell. 19:270-280.
    • (2007) Plant Cell. , vol.19 , pp. 270-280
    • Mitsuda, N.1    Iwase, A.2    Yamamoto, H.3    Yoshida, M.4    Seki, M.5    Shinozaki, K.6    Ohme-Takagi, M.7
  • 62
    • 3042602321 scopus 로고    scopus 로고
    • A weed for wood? Arabidopsis as a genetic model for xylem development
    • Nieminen, K. M., L. Kauppinen, and Y. Helariutta 2004. A weed for wood? Arabidopsis as a genetic model for xylem development. Plant Physiol. 135:653-659.
    • (2004) Plant Physiol. , vol.135 , pp. 653-659
    • Nieminen, K.M.1    Kauppinen, L.2    Helariutta, Y.3
  • 64
    • 13744249762 scopus 로고    scopus 로고
    • NAC transcription factors: structurally distinct, functionally diverse
    • Olsen, A. N., H. A. Ernst, L. L. Leggio, and K. Skriver 2005. NAC transcription factors: structurally distinct, functionally diverse. Trends Plant Sci. 10:79-87.
    • (2005) Trends Plant Sci. , vol.10 , pp. 79-87
    • Olsen, A.N.1    Ernst, H.A.2    Leggio, L.L.3    Skriver, K.4
  • 66
    • 34250689932 scopus 로고    scopus 로고
    • The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Proc. Natl. Acad. Sci. USA
    • Palenik, B., J. Grimwood, A. Aerts, P. Rouzé, A. Salamov, N. Putnam, C. Dupont, R. Jorgensen, E. Derelle, S. Rombauts, et al. 2007. The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Proc. Natl. Acad. Sci. USA 104:7705-7710.
    • (2007) , vol.104 , pp. 7705-7710
    • Palenik, B.1    Grimwood, J.2    Aerts, A.3    Rouzé, P.4    Salamov, A.5    Putnam, N.6    Dupont, C.7    Jorgensen, R.8    Derelle, E.9    Rombauts, S.10
  • 68
    • 70349904253 scopus 로고    scopus 로고
    • A NAC transcription factor gene of chickpea (Cicer arietinum), CarNAC3, is involved in drought stress response and various developmental processes
    • Peng, H., H. Y. Cheng, C. Chen, X. W. Yu, J. N. Yang, W. R. Gao, Q. H. Shi, H. Zhang, J. G. Li, and H. Ma 2009. A NAC transcription factor gene of chickpea (Cicer arietinum), CarNAC3, is involved in drought stress response and various developmental processes. J. Plant Physiol. 166:1934-1945.
    • (2009) J. Plant Physiol. , vol.166 , pp. 1934-1945
    • Peng, H.1    Cheng, H.Y.2    Chen, C.3    Yu, X.W.4    Yang, J.N.5    Gao, W.R.6    Shi, Q.H.7    Zhang, H.8    Li, J.G.9    Ma, H.10
  • 69
    • 77952222149 scopus 로고    scopus 로고
    • Origin and diversification of basic-helix-loop-helix proteins in plants
    • Pires, N., and L. Dolan 2010. Origin and diversification of basic-helix-loop-helix proteins in plants. Mol. Biol. Evol. 27:862-874.
    • (2010) Mol. Biol. Evol. , vol.27 , pp. 862-874
    • Pires, N.1    Dolan, L.2
  • 70
    • 0033764841 scopus 로고    scopus 로고
    • HRT gene function requires interaction between a NAC protein and viral capsid protein to confer resistance to turnip crinkle virus
    • Ren, T., F. Qu, and T. J. Morris 2000. HRT gene function requires interaction between a NAC protein and viral capsid protein to confer resistance to turnip crinkle virus. Plant Cell. 12:1917-1925.
    • (2000) Plant Cell. , vol.12 , pp. 1917-1925
    • Ren, T.1    Qu, F.2    Morris, T.J.3
  • 73
    • 0344972659 scopus 로고    scopus 로고
    • Phloem long-distance transport of CmNACP mRNA: implications for supracellular regulation in plants
    • Ruiz-Medrano, R., B. Xoconostle-Cazares, and W. J. Lucas 1999. Phloem long-distance transport of CmNACP mRNA: implications for supracellular regulation in plants. Development 126:4405-4419.
    • (1999) Development , vol.126 , pp. 4405-4419
    • Ruiz-Medrano, R.1    Xoconostle-Cazares, B.2    Lucas, W.J.3
  • 74
    • 0032498232 scopus 로고    scopus 로고
    • A homolog of NO APICAL MERISTEM is an immediate target of the floral homeotic genes APETALA3/PISTILLATA
    • Sablowski, R. W. and M. E. M. Meyerowitz 1998. A homolog of NO APICAL MERISTEM is an immediate target of the floral homeotic genes APETALA3/PISTILLATA. Cell 92:93-103.
    • (1998) Cell , vol.92 , pp. 93-103
    • Sablowski, R.W.1    Meyerowitz, M.E.M.2
  • 75
    • 76449118882 scopus 로고    scopus 로고
    • Cold activation of a plasma membrane-tethered NAC transcription factor induces a pathogen resistance response in Arabidopsis
    • Seo, P. J., M. J. Kim, J. Y. Park, S. Y. Kim, J. Jeon, Y. H. Lee, J. Kim, and C. M. Park 2010. Cold activation of a plasma membrane-tethered NAC transcription factor induces a pathogen resistance response in Arabidopsis. Plant J. 61:661-671.
    • (2010) Plant J. , vol.61 , pp. 661-671
    • Seo, P.J.1    Kim, M.J.2    Park, J.Y.3    Kim, S.Y.4    Jeon, J.5    Lee, Y.H.6    Kim, J.7    Park, C.M.8
  • 76
    • 4444363053 scopus 로고    scopus 로고
    • Genome duplication led to highly selective expansion of the Arabidopsis thaliana proteome
    • Seoighe, C., and C. Gehring 2004. Genome duplication led to highly selective expansion of the Arabidopsis thaliana proteome. Trends Genet. 20:461-464.
    • (2004) Trends Genet. , vol.20 , pp. 461-464
    • Seoighe, C.1    Gehring, C.2
  • 77
    • 34249712966 scopus 로고    scopus 로고
    • Patterns of gene duplication and functional diversification during the evolution of the AP1/SQUA subfamily of plant MADS-box genes
    • Shan, H., N. Zhang, C. Liu, G. Xu, J. Zhang, Z. Chen, and H. Kong 2007. Patterns of gene duplication and functional diversification during the evolution of the AP1/SQUA subfamily of plant MADS-box genes. Mol Phylogenet Evol. 44:26-41.
    • (2007) Mol Phylogenet Evol , vol.44 , pp. 26-41
    • Shan, H.1    Zhang, N.2    Liu, C.3    Xu, G.4    Zhang, J.5    Chen, Z.6    Kong, H.7
  • 79
    • 0029960982 scopus 로고    scopus 로고
    • The no apical meristem gene of petunia is required for pattern formation in embryos and flowers and is expressed at meristem and primordia boundaries
    • Souer, E., A. van Houwelingen, D. Kloos, J. Mol, and R. Koes 1996. The no apical meristem gene of petunia is required for pattern formation in embryos and flowers and is expressed at meristem and primordia boundaries. Cell 85:159-170.
    • (1996) Cell , vol.85 , pp. 159-170
    • Souer, E.1    van Houwelingen, A.2    Kloos, D.3    Mol, J.4    Koes, R.5
  • 80
    • 73949115857 scopus 로고    scopus 로고
    • Identification of up-regulated genes in flag leaves during rice grain filling and characterization of OsNAC5, a new ABA-dependent transcription factor
    • Sperotto, R. A., F. K. Ricachenevsky, G. L. Duarte, T. Boff, K. L. Lopes, E. R. Sperb, M. A. Grusak, and J. P. Fett 2009. Identification of up-regulated genes in flag leaves during rice grain filling and characterization of OsNAC5, a new ABA-dependent transcription factor. Planta 230:985-1002.
    • (2009) Planta , vol.230 , pp. 985-1002
    • Sperotto, R.A.1    Ricachenevsky, F.K.2    Duarte, G.L.3    Boff, T.4    Lopes, K.L.5    Sperb, E.R.6    Grusak, M.A.7    Fett, J.P.8
  • 82
    • 0032769862 scopus 로고    scopus 로고
    • Slow and prolonged activation of the p47 protein kinase during hypersensitive cell death in a culture of tobacco cells
    • Suzuki, K., A. Yano, and H. Shinshi 1999. Slow and prolonged activation of the p47 protein kinase during hypersensitive cell death in a culture of tobacco cells. Plant Physiol. 119:1465-1472.
    • (1999) Plant Physiol , vol.119 , pp. 1465-1472
    • Suzuki, K.1    Yano, A.2    Shinshi, H.3
  • 83
    • 0035032744 scopus 로고    scopus 로고
    • The CUP-SHAPED COTYLEDON1 gene of Arabidopsis regulates shoot apical meristem formation
    • Takada, S., K. Hibara, T. Ishida, and M. Tasaka 2001. The CUP-SHAPED COTYLEDON1 gene of Arabidopsis regulates shoot apical meristem formation. Development 128:1127-1135.
    • (2001) Development , vol.128 , pp. 1127-1135
    • Takada, S.1    Hibara, K.2    Ishida, T.3    Tasaka, M.4
  • 84
    • 76249106402 scopus 로고    scopus 로고
    • Angiosperm genome comparisons reveal early polyploidy in the monocot lineage
    • Tang, H., J. E. Bowers, X. Wang, and A. H. Patersona 2009. Angiosperm genome comparisons reveal early polyploidy in the monocot lineage. Proc. Natl. Acad. Sci. USA 107:472-477.
    • (2009) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 472-477
    • Tang, H.1    Bowers, J.E.2    Wang, X.3    Patersona, A.H.4
  • 86
    • 33751567544 scopus 로고    scopus 로고
    • A NAC gene regulating senescence improves grain protein, zinc, and iron content in wheat
    • Uauy, C., A. Distelfeld, T. Fahima, A. Blechl, and J. Dubcovsky 2006. A NAC gene regulating senescence improves grain protein, zinc, and iron content in wheat. Science 314:1298-1301.
    • (2006) Science , vol.314 , pp. 1298-1301
    • Uauy, C.1    Distelfeld, A.2    Fahima, T.3    Blechl, A.4    Dubcovsky, J.5
  • 87
    • 0038381027 scopus 로고    scopus 로고
    • The CUP-SHAPED COTYLEDON3 gene is required for boundary and shoot meristem formation in Arabidopsis
    • Vroemen, C. W., A. P. Mordhorst, C. Albrecht, M. A. C. J. Kwaaitaal, and S. C. de Vries 2003. The CUP-SHAPED COTYLEDON3 gene is required for boundary and shoot meristem formation in Arabidopsis. Plant Cell. 15:1563-1577.
    • (2003) Plant Cell. , vol.15 , pp. 1563-1577
    • Vroemen, C.W.1    Mordhorst, A.P.2    Albrecht, C.3    Kwaaitaal, M.A.C.J.4    de Vries, S.C.5
  • 88
    • 60249102826 scopus 로고    scopus 로고
    • Expansion and diversification of the Populus R2R3-MYB family of transcription factors
    • Wilkins, O., H. Nahal, J. Foong, N. J. Provart, and M. M. Campbell 2009. Expansion and diversification of the Populus R2R3-MYB family of transcription factors. Plant Physiol. 149:981-993.
    • (2009) Plant Physiol. , vol.149 , pp. 981-993
    • Wilkins, O.1    Nahal, H.2    Foong, J.3    Provart, N.J.4    Campbell, M.M.5
  • 89
    • 57049134685 scopus 로고    scopus 로고
    • The NAC domain transcription factors FEZ and SOMBRERO control the orientation of cell division plane in Arabidopsis root stem cells
    • Willemsen, V., M. Bauch, T. Bennett, A. Campilho, H. Wolkenfelt, J. Xu, J. Haseloff, and B. Scheres 2008. The NAC domain transcription factors FEZ and SOMBRERO control the orientation of cell division plane in Arabidopsis root stem cells. Dev. Cell 15:913-922.
    • (2008) Dev. Cell , vol.15 , pp. 913-922
    • Willemsen, V.1    Bauch, M.2    Bennett, T.3    Campilho, A.4    Wolkenfelt, H.5    Xu, J.6    Haseloff, J.7    Scheres, B.8
  • 90
    • 78149466527 scopus 로고    scopus 로고
    • Characterization of a novel wheat NAC transcription factor gene involved in defense response against stripe rust pathogen infection and abiotic stresses
    • Xia, N., G. Zhang, X. Y. Liu, L. Deng, G. L. Cai, Y. Zhang, X. J. Wang, J. Zhao, L. L. Huang, and Z. S. Kang 2010. Characterization of a novel wheat NAC transcription factor gene involved in defense response against stripe rust pathogen infection and abiotic stresses. Mol. Biol. Rep. 37:3703-3712.
    • (2010) Mol. Biol. Rep. , vol.37 , pp. 3703-3712
    • Xia, N.1    Zhang, G.2    Liu, X.Y.3    Deng, L.4    Cai, G.L.5    Zhang, Y.6    Wang, X.J.7    Zhao, J.8    Huang, L.L.9    Kang, Z.S.10
  • 91
    • 0033103635 scopus 로고    scopus 로고
    • GRAB proteins, novel members of the NAC domain family, isolated by their interaction with a geminivirus protein
    • Xie, Q., A. P. Sanz-Burgos, H. Guo, J. A. Garcia, and C. Gutierrez 1999. GRAB proteins, novel members of the NAC domain family, isolated by their interaction with a geminivirus protein. Plant Mol. Biol. 39:647-656.
    • (1999) Plant Mol. Biol. , vol.39 , pp. 647-656
    • Xie, Q.1    Sanz-Burgos, A.P.2    Guo, H.3    Garcia, J.A.4    Gutierrez, C.5
  • 92
    • 0033635955 scopus 로고    scopus 로고
    • Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development
    • Xie, Q., G. Frugis, D. Colgan, and N. H. Chua 2000. Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development. Genes Dev. 14:3024-3036.
    • (2000) Genes Dev. , vol.14 , pp. 3024-3036
    • Xie, Q.1    Frugis, G.2    Colgan, D.3    Chua, N.H.4
  • 93
    • 0037068470 scopus 로고    scopus 로고
    • SINAT5 promotes ubiquitin-related degradation of NAC1 to attenuate auxin signals
    • Xie, Q., H. S. Guo, G. Dallman, S. Fang, A. M. Weissman, and N. H. Chua 2002. SINAT5 promotes ubiquitin-related degradation of NAC1 to attenuate auxin signals. Nature 419:167-170.
    • (2002) Nature , vol.419 , pp. 167-170
    • Xie, Q.1    Guo, H.S.2    Dallman, G.3    Fang, S.4    Weissman, A.M.5    Chua, N.H.6
  • 94
    • 26444578198 scopus 로고    scopus 로고
    • Transcription factors in rice: a genome-wide comparative analysis between monocots and eudicots
    • Xiong, Y., T. Liu, C. Tian, S. Sun, J. Li, and M. Chen 2005. Transcription factors in rice: a genome-wide comparative analysis between monocots and eudicots. Plant Mol. Biol. 59:191-203.
    • (2005) Plant Mol. Biol. , vol.59 , pp. 191-203
    • Xiong, Y.1    Liu, T.2    Tian, C.3    Sun, S.4    Li, J.5    Chen, M.6
  • 95
    • 58849132032 scopus 로고    scopus 로고
    • Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification
    • Xu, G., H. Ma, M. Nei, and H. Kong 2009. Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification. Proc. Natl. Acad. Sci. USA. 106:835-840.
    • (2009) Proc. Natl. Acad. Sci. USA. , vol.106 , pp. 835-840
    • Xu, G.1    Ma, H.2    Nei, M.3    Kong, H.4
  • 96
    • 49249121142 scopus 로고    scopus 로고
    • VASCULAR-RELATED NAC-DOMAIN7 is involved in the differentiation of all types of xylem vessels in Arabidopsis roots and shoots
    • Yamaguchi, M., M. Kubo, H. Fukuda, and T. Demura 2008. VASCULAR-RELATED NAC-DOMAIN7 is involved in the differentiation of all types of xylem vessels in Arabidopsis roots and shoots. Plant J. 55:652-664.
    • (2008) Plant J. , vol.55 , pp. 652-664
    • Yamaguchi, M.1    Kubo, M.2    Fukuda, H.3    Demura, T.4
  • 97
    • 77953212311 scopus 로고    scopus 로고
    • VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis
    • Yamaguchi, M., M. Ohtani, N. Mitsuda, M. Kubo, M. Ohme-Takagi, H. Fukuda, and T. Demura 2010. VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis. Plant Cell. 22:1249-1263.
    • (2010) Plant Cell. , vol.22 , pp. 1249-1263
    • Yamaguchi, M.1    Ohtani, M.2    Mitsuda, N.3    Kubo, M.4    Ohme-Takagi, M.5    Fukuda, H.6    Demura, T.7
  • 98
    • 63349095487 scopus 로고    scopus 로고
    • Tolerance to various environmental stresses conferred by the salt-responsive rice gene ONAC063 in transgenic Arabidopsis
    • Yokotani, N., T. Ichikawa, Y. Kondou, M. Matsui, H. Hirochika, M. Iwabuchi, and K. Oda 2009. Tolerance to various environmental stresses conferred by the salt-responsive rice gene ONAC063 in transgenic Arabidopsis. Planta 229:1065-1075.
    • (2009) Planta , vol.229 , pp. 1065-1075
    • Yokotani, N.1    Ichikawa, T.2    Kondou, Y.3    Matsui, M.4    Hirochika, H.5    Iwabuchi, M.6    Oda, K.7
  • 99
    • 39849096564 scopus 로고    scopus 로고
    • Control of flowering time and cold response by a NAC-domain protein in Arabidopsis
    • Yoo, S. Y., Y. Kim, S. Y. Kim, J. S. Lee, and J. H. Ahn 2007. Control of flowering time and cold response by a NAC-domain protein in Arabidopsis. PLoS One 2:e642.
    • (2007) PLoS One , vol.2
    • Yoo, S.Y.1    Kim, Y.2    Kim, S.Y.3    Lee, J.S.4    Ahn, J.H.5
  • 100
    • 77950103601 scopus 로고    scopus 로고
    • The NAC transcription factor RIM1 of rice is a new regulator of jasmonate signaling
    • Yoshii, M., M. Yamazaki, R. Rakwal, M. Kishi-Kaboshi, A. Miyao, and H. Hirochika 2010. The NAC transcription factor RIM1 of rice is a new regulator of jasmonate signaling. Plant J. 61:804-815.
    • (2010) Plant J , vol.61 , pp. 804-815
    • Yoshii, M.1    Yamazaki, M.2    Rakwal, R.3    Kishi-Kaboshi, M.4    Miyao, A.5    Hirochika, H.6
  • 101
    • 15944373717 scopus 로고    scopus 로고
    • Theevolution of the SEPALLATA subfamily of MADS-box genes: a preangiosperm origin with multiple duplications throughout angiosperm history
    • Zahn, L. M., H. Kong, J. H. Leebens-Mack, S. Kim, P. S. Soltis, L. L. Landherr, D. E. Soltis, C. W. Depamphilis, and H. Ma 2005. Theevolution of the SEPALLATA subfamily of MADS-box genes: a preangiosperm origin with multiple duplications throughout angiosperm history. Genetics 169:2209-2223.
    • (2005) Genetics , vol.169 , pp. 2209-2223
    • Zahn, L.M.1    Kong, H.2    Leebens-Mack, J.H.3    Kim, S.4    Soltis, P.S.5    Landherr, L.L.6    Soltis, D.E.7    Depamphilis, C.W.8    Ma, H.9
  • 102
    • 0037500141 scopus 로고    scopus 로고
    • Evolution by gene duplication: an update
    • Zhang, J. 2003. Evolution by gene duplication: an update. Trends Ecol. Evol. 18:292-298.
    • (2003) Trends Ecol. Evol. , vol.18 , pp. 292-298
    • Zhang, J.1
  • 103
    • 0035980032 scopus 로고    scopus 로고
    • Gene duplication and evolution
    • Zhang, L., B. S. Gaut, and T. J. Vision 2001. Gene duplication and evolution. Science 293:1551.
    • (2001) Science , vol.293 , pp. 1551
    • Zhang, L.1    Gaut, B.S.2    Vision, T.J.3
  • 104
    • 38649119496 scopus 로고    scopus 로고
    • XND1, a member of the NAC domain family in Arabidopsis thaliana, negatively regulates lignocellulose synthesis and programmed cell death in xylem
    • Zhao, C., U. Avci, E. H. Grant, C. H. Haigler, and E. P. Beers 2008. XND1, a member of the NAC domain family in Arabidopsis thaliana, negatively regulates lignocellulose synthesis and programmed cell death in xylem. Plant J. 53:425-436.
    • (2008) Plant J. , vol.53 , pp. 425-436
    • Zhao, C.1    Avci, U.2    Grant, E.H.3    Haigler, C.H.4    Beers, E.P.5
  • 105
    • 58949093371 scopus 로고    scopus 로고
    • Overexpression of a NAC transcription factor enhances rice drought and salt tolerance
    • Zheng, X., B. Chen, G. Lu, and B. Han 2009. Overexpression of a NAC transcription factor enhances rice drought and salt tolerance. Biochem. Biophys. Res. Commun. 379:985-989.
    • (2009) Biochem. Biophys. Res. Commun. , vol.379 , pp. 985-989
    • Zheng, X.1    Chen, B.2    Lu, G.3    Han, B.4
  • 106
    • 34247388464 scopus 로고    scopus 로고
    • Two NAC domain transcription factors, SND1 and NST1, function redundantly in regulation of secondary wall synthesis in fibers of Arabidopsis
    • Zhong, R., E. A. Richardson, and Z. H. Ye 2007. Two NAC domain transcription factors, SND1 and NST1, function redundantly in regulation of secondary wall synthesis in fibers of Arabidopsis. Planta 225:1603-1611.
    • (2007) Planta , vol.225 , pp. 1603-1611
    • Zhong, R.1    Richardson, E.A.2    Ye, Z.H.3
  • 107
    • 75949130469 scopus 로고    scopus 로고
    • Functional characterization of poplar wood-associated NAC domain transcription factors
    • Zhong, R., C. Lee, and Z. H. Ye 2010. Functional characterization of poplar wood-associated NAC domain transcription factors. Plant Physiol. 152:1044-1055.
    • (2010) Plant Physiol. , vol.152 , pp. 1044-1055
    • Zhong, R.1    Lee, C.2    Ye, Z.H.3
  • 108
    • 77956631441 scopus 로고    scopus 로고
    • Origin and diversification of land plant CC-type glutaredoxins
    • Ziemann, M., M. Bhave, and S. Zachgo 2009. Origin and diversification of land plant CC-type glutaredoxins. Genome Biol. Evol. 1:265-277.
    • (2009) Genome Biol. Evol. , vol.1 , pp. 265-277
    • Ziemann, M.1    Bhave, M.2    Zachgo, S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.