Sub-millisecond time-resolved SAXS using a continuous-flow mixer and X-ray microbeam

Journal of Synchrotron Radiation

Volumn 20, Issue 6, 2013, Pages 820-825

  Graceffa, Rita ^a,c   Nobrega, R Paul ^b   Barrea, Raul A ^a,d   Kathuria, Sagar V ^b   Chakravarthy, Srinivas ^a   Bilsel, Osman ^b   Irving, Thomas C ^a  

^a ILLINOIS INSTITUTE OF TECHNOLOGY   (United States)

^b UNIVERSITY OF MASSACHUSETTS MEDICAL SCHOOL   (United States)

^c UNIVERSITY OF GÖTTINGEN   (Germany)

^d DEPAUL UNIVERSITY   (United States)

Author keywords

micro SAXS; protein folding; time resolved

Indexed keywords

ADVANCED PHOTON SOURCE; ARGONNE NATIONAL LABORATORY; MICRO-SAXS; MICROMACHINING TECHNIQUES; PHYSIOLOGICAL ENVIRONMENT; SMALL ANGLE X-RAY SCATTERING; TIME-RESOLVED; WELL-ESTABLISHED TECHNIQUES;

DATA ACQUISITION; MIXERS (MACHINERY); PHYSIOLOGICAL MODELS; PROBES; PROTEIN FOLDING; REACTION KINETICS;

X RAYS;

PROTEIN; RNA;

ARTICLE; CHEMISTRY; MICRO-SAXS; PROTEIN FOLDING; SMALL ANGLE SCATTERING; TIME-RESOLVED; X RAY DIFFRACTION;

MICRO-SAXS; PROTEIN FOLDING; TIME-RESOLVED;

PROTEINS; RNA; SCATTERING, SMALL ANGLE; X-RAY DIFFRACTION;

EID: 84885586093     PISSN: 09090495     EISSN: 16005775     Source Type: Journal    
DOI: 10.1107/S0909049513021833     Document Type: Article

References (31)

1. Akiyama, S., Takahashi, S., Kimura, T., Ishimori, K., Morishima, I., Nishikawa, Y. & Fujisawa, T. (2002). Proc. Natl Acad. Sci. USA, 99, 1329-1334.
2. Arai, M., Kondrashkina, E., Kayatekin, C., Matthews, C. R., Iwakura, M. & Bilsel, O. (2007). J. Mol. Biol. 368, 219-229.
3. Barrea, R. A., Gore, D., Kondrashkina, E., Weng, T., Heurich, R., Vukonich, M., Orgel, J., Davidson, M., Collingwood, J. F., Mikhaylova, A. & Irving, T. C. (2006). Proceedings of the 8th International Conference on X-ray Microscopy, IPAP Conference Series 7, pp. 230-232, Institute of Pure and Applied Physics, Japan.
4. Barrea, R. A., Gore, D., Kujala, N., Karanfil, C., Kozyrenko, S., Heurich, R., Vukonich, M., Huang, R., Paunesku, T., Woloschak, G. & Irving, T. C. (2010). J. Synchrotron Rad. 17, 522-529.
5. Bilsel, O., Kayatekin, C., Wallace, L. A. & Matthews, C. R. (2005). Rev. Sci. Instrum. 76, 014302.
6. Chan, C. K., Hu, Y., Takahashi, S., Rousseau, D. L., Eaton, W. A. & Hofrichter, J. (1997). Proc. Natl Acad. Sci. USA, 94, 1779-1784.
7. Chattopadhyay, K., Saffarian, S., Elson, E. L. & Frieden, C. (2002). Proc. Natl Acad. Sci. USA, 99, 14171-14176.
8. Doyle, S. M., Bilsel, O. & Teschke, C. M. (2004). J. Mol. Biol. 341, 199-214.
9. Eliezer, D., Jennings, P. A., Wright, P. E., Doniach, S., Hodgson, K. O. & Tsuruta, H. (1995). Science, 270, 487-488.
10. Eng, P. J., Newville, M., Rivers, M. & Sutton, S. R. (1998). Proc. SPIE, 3449, 145-156.
11. Fischetti, R., Stepanov, S., Rosenbaum, G., Barrea, R., Black, E., Gore, D., Heurich, R., Kondrashkina, E., Kropf, A. J., Wang, S., Zhang, K., Irving, T. C. & Bunker, G. B. (2004). J. Synchrotron Rad. 11, 399-405.
12. Guida, V. (2010). Adv. Colloid Interface Sci. 161, 77-88.
13. Henry, E. R. & Hofrichter, J. (1992). Methods Enzymol. 210, 129-192.
14. Johnson, B. K. & Prud'homme, R. K. (2003). Phys. Rev. Lett. 91, 118302.
15. Kathuria, S. V., Guo, L., Graceffa, R., Barrea, R., Nobrega, R. P., Matthews, C. R., Irving, T. C. & Bilsel, O. (2011). Biopolymers, 95, 550-558.
16. Lipman, E. A., Schuler, B., Bakajin, O. & Eaton, W. A. (2003). Science, 301, 1233-1235.
17. Regenfuss, P., Clegg, R. M., Fulwyler, M. J., Barrantes, F. J. & Jovin, T. M. (1985). Rev. Sci. Instrum. 56, 283.
18. Roder, H., Maki, K., Cheng, H. & Shastry, M. C. (2004). Methods, 34, 15-27.
19. Roder, H. & Shastry, M. R. (1999). Curr. Opin. Struct. Biol. 9, 620-626.
20. Roh, J. H., Guo, L., Kilburn, J. D., Briber, R. M., Irving, T. & Woodson, S. A. (2010). J. Am. Chem. Soc. 132, 10148-10154.
21. Schuler, B. & Eaton, W. A. (2008). Curr. Opin. Struct. Biol. 18, 16-26.
22. Shastry, M. C. & Roder, H. (1998). Nat. Struct. Biol. 5, 385-392.
23. Sosnick, T. R. & Barrick, D. (2011). Curr. Opin. Struct. Biol. 21, 12-24.
24. Srajer, V. & Royer, W. E. (2008). Methods Enzymol. 437, 379-395.
25. Svergun, D. I. & Koch, M. H. J. (2003). Rep. Prog. Phys. 66, 1735-1782.
26. Thirumalai, D., Lee, N., Woodson, S. A. & Klimov, D. (2001). Annu. Rev. Phys. Chem. 52, 751-762.
27. Wee, L. M., Flores-Jasso, C. F., Salomon, W. E. & Zamore, P. D. (2012). Cell, 151, 1055-1067.
28. Weiss, T. M., Narayanan, T., Wolf, C., Gradzielski, M., Panine, P., Finet, S. & Helsby, W. I. (2005). Phys. Rev. Lett. 94, 038303.
29. Werner, J. H., Joggerst, R., Dyer, R. B. & Goodwin, P. M. (2006). Proc. Natl Acad. Sci. USA, 103, 11130-11135.
30. Woodson, S. A. (2010). Annu. Rev. Biophys. 39, 61-77.
31. Wu, Y., Kondrashkina, E., Kayatekin, C., Matthews, C. R. & Bilsel, O. (2008). Proc. Natl Acad. Sci. USA, 105, 13367-13372.