-
1
-
-
1542351607
-
Targeting transgene expression in research, agricultural, and environmental applications: promoters used in plant transformation
-
Potenza C, Aleman L, Sengupta-Gopalan C. Targeting transgene expression in research, agricultural, and environmental applications: promoters used in plant transformation. In Vitro Cell Dev Biol - Plant 2004, 40:1-22.
-
(2004)
In Vitro Cell Dev Biol - Plant
, vol.40
, pp. 1-22
-
-
Potenza, C.1
Aleman, L.2
Sengupta-Gopalan, C.3
-
2
-
-
0035999364
-
Synthetic plant promoters containing defined regulatory elements provide novel insights into pathogen- and wound-induced signaling
-
10.1105/tpc.010412, 150679, 11971132
-
Rushton PJ, Reinstädler A, Lipka V, Lippok B, Somssich IE. Synthetic plant promoters containing defined regulatory elements provide novel insights into pathogen- and wound-induced signaling. Plant Cell 2002, 14:749-762. 10.1105/tpc.010412, 150679, 11971132.
-
(2002)
Plant Cell
, vol.14
, pp. 749-762
-
-
Rushton, P.J.1
Reinstädler, A.2
Lipka, V.3
Lippok, B.4
Somssich, I.E.5
-
3
-
-
33847624994
-
Synthetic promoters: genetic control through cis engineering
-
10.1016/j.tplants.2007.01.002, 17292658
-
Venter M. Synthetic promoters: genetic control through cis engineering. Trends Plant Sci 2007, 12:118-124. 10.1016/j.tplants.2007.01.002, 17292658.
-
(2007)
Trends Plant Sci
, vol.12
, pp. 118-124
-
-
Venter, M.1
-
4
-
-
84855167999
-
Transcriptomic analysis reveals calcium regulation of specific promoter motifs in Arabidopsis
-
10.1105/tpc.111.090480, 3246331, 22086087
-
Whalley HJ, Sargeant AW, Steele JFC, Lacoere T, Lamb R, Saunders NJ, Knight H, Knight MR. Transcriptomic analysis reveals calcium regulation of specific promoter motifs in Arabidopsis. Plant Cell 2011, 23:4079-4095. 10.1105/tpc.111.090480, 3246331, 22086087.
-
(2011)
Plant Cell
, vol.23
, pp. 4079-4095
-
-
Whalley, H.J.1
Sargeant, A.W.2
Steele, J.F.C.3
Lacoere, T.4
Lamb, R.5
Saunders, N.J.6
Knight, H.7
Knight, M.R.8
-
5
-
-
19444380294
-
Engineering plants with increased disease resistance: how are we going to express it?
-
10.1016/j.tibtech.2005.04.009, 15922080
-
Gurr SJ, Rushton PJ. Engineering plants with increased disease resistance: how are we going to express it?. Trends Biotechnol 2005, 23:283-290. 10.1016/j.tibtech.2005.04.009, 15922080.
-
(2005)
Trends Biotechnol
, vol.23
, pp. 283-290
-
-
Gurr, S.J.1
Rushton, P.J.2
-
6
-
-
0037019811
-
Generation of a synthetic mammalian promoter library by modification of sequences spacing transcription factor binding sites
-
10.1016/S0378-1119(02)00878-8, 12384282
-
Tornøe J, Kusk P, Johansen TE, Jensen PR. Generation of a synthetic mammalian promoter library by modification of sequences spacing transcription factor binding sites. Gene 2002, 297:21-32. 10.1016/S0378-1119(02)00878-8, 12384282.
-
(2002)
Gene
, vol.297
, pp. 21-32
-
-
Tornøe, J.1
Kusk, P.2
Johansen, T.E.3
Jensen, P.R.4
-
7
-
-
35348955882
-
A universal framework for regulatory element discovery across all genomes and data types
-
10.1016/j.molcel.2007.09.027, 2900317, 17964271
-
Elemento O, Slonim N, Tavazoie S. A universal framework for regulatory element discovery across all genomes and data types. Mol Cell 2007, 28:337-350. 10.1016/j.molcel.2007.09.027, 2900317, 17964271.
-
(2007)
Mol Cell
, vol.28
, pp. 337-350
-
-
Elemento, O.1
Slonim, N.2
Tavazoie, S.3
-
8
-
-
77951266764
-
Finding regulatory DNA motifs using alignment-free evolutionary conservation information
-
10.1093/nar/gkp1166, 2847231, 20047961
-
Gordan R, Narlikar L, Hartemink AJ. Finding regulatory DNA motifs using alignment-free evolutionary conservation information. Nucleic Acids Res 2010, 38:e90. 10.1093/nar/gkp1166, 2847231, 20047961.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Gordan, R.1
Narlikar, L.2
Hartemink, A.J.3
-
9
-
-
84863890567
-
Genomic approaches towards finding cis-regulatory modules in animals
-
10.1038/nrg3242, 3541939, 22705667
-
Hardison RC, Taylor J. Genomic approaches towards finding cis-regulatory modules in animals. Nature Rev Genet 2012, 13:469-483. 10.1038/nrg3242, 3541939, 22705667.
-
(2012)
Nature Rev Genet
, vol.13
, pp. 469-483
-
-
Hardison, R.C.1
Taylor, J.2
-
10
-
-
77349120278
-
Genome-wide prediction of transcription factor binding sites using an integrated model
-
10.1186/gb-2010-11-1-r7, 2847719, 20096096
-
Won K-J, Ren B, Wang W. Genome-wide prediction of transcription factor binding sites using an integrated model. Genome Biol 2010, 11:R7. 10.1186/gb-2010-11-1-r7, 2847719, 20096096.
-
(2010)
Genome Biol
, vol.11
-
-
Won, K.-J.1
Ren, B.2
Wang, W.3
-
11
-
-
84865859719
-
Integration of bioinformatics and synthetic promoters leads to the discovery of novel elicitor-responsive cis-regulatory sequences in Arabidopsis
-
10.1104/pp.112.198259, 3440196, 22744985
-
Koschmann J, Machens F, Becker M, Niemeyer J, Schulze J, Bülow L, Stahl DJ, Hehl R. Integration of bioinformatics and synthetic promoters leads to the discovery of novel elicitor-responsive cis-regulatory sequences in Arabidopsis. Plant Physiol 2012, 160:178-191. 10.1104/pp.112.198259, 3440196, 22744985.
-
(2012)
Plant Physiol
, vol.160
, pp. 178-191
-
-
Koschmann, J.1
Machens, F.2
Becker, M.3
Niemeyer, J.4
Schulze, J.5
Bülow, L.6
Stahl, D.J.7
Hehl, R.8
-
12
-
-
80052576152
-
Cis-regulatory code of stress-responsive transcription in Arabidopsis thaliana
-
10.1073/pnas.1103202108, 3169165, 21849619
-
Zou C, Sun K, Mackaluso JD, Seddon AE, Jin R, Thomashow MF, Shiu S-H. Cis-regulatory code of stress-responsive transcription in Arabidopsis thaliana. Proc Natl Acad Sci U S A 2011, 108:14992-14997. 10.1073/pnas.1103202108, 3169165, 21849619.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 14992-14997
-
-
Zou, C.1
Sun, K.2
Mackaluso, J.D.3
Seddon, A.E.4
Jin, R.5
Thomashow, M.F.6
Shiu, S.-H.7
-
13
-
-
0034724286
-
Synthetic promoter elements obtained by nucleotide sequence variation and selection for activity
-
10.1073/pnas.97.7.3038, 16188, 10725347
-
Edelman GM, Meech R, Owens GC, Jones FS. Synthetic promoter elements obtained by nucleotide sequence variation and selection for activity. Proc Natl Acad Sci U S A 2000, 97:3038-3043. 10.1073/pnas.97.7.3038, 16188, 10725347.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 3038-3043
-
-
Edelman, G.M.1
Meech, R.2
Owens, G.C.3
Jones, F.S.4
-
14
-
-
77249137749
-
Synthetic design of strong promoters
-
10.1073/pnas.0914803107, 2823900, 20133776
-
Schlabach MR, Hu JK, Li M, Elledge SJ. Synthetic design of strong promoters. Proc Natl Acad Sci U S A 2010, 107:2538-2543. 10.1073/pnas.0914803107, 2823900, 20133776.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 2538-2543
-
-
Schlabach, M.R.1
Hu, J.K.2
Li, M.3
Elledge, S.J.4
-
15
-
-
3042530074
-
The transcriptional innate immune response to flg22. Interplay and overlap with avr gene-dependent defense responses and bacterial pathogenesis
-
10.1104/pp.103.036749, 514144, 15181213
-
Navarro L, Zipfel C, Rowland O, Keller I, Robatzek S, Boller T, Jones JDG. The transcriptional innate immune response to flg22. Interplay and overlap with avr gene-dependent defense responses and bacterial pathogenesis. Plant Physiol 2004, 135:1113-1128. 10.1104/pp.103.036749, 514144, 15181213.
-
(2004)
Plant Physiol
, vol.135
, pp. 1113-1128
-
-
Navarro, L.1
Zipfel, C.2
Rowland, O.3
Keller, I.4
Robatzek, S.5
Boller, T.6
Jones, J.D.G.7
-
16
-
-
0001598258
-
Differential early activation of defense-related genes in elicitor-treated parsley cells
-
10.1007/BF00020507, 24272801
-
Somssich IE, Bollmann J, Hahlbrock K, Kombrink E, Schulz W. Differential early activation of defense-related genes in elicitor-treated parsley cells. Plant Mol Biol 1989, 12:227-234. 10.1007/BF00020507, 24272801.
-
(1989)
Plant Mol Biol
, vol.12
, pp. 227-234
-
-
Somssich, I.E.1
Bollmann, J.2
Hahlbrock, K.3
Kombrink, E.4
Schulz, W.5
-
17
-
-
0027344303
-
Isolation of putative defense-related genes from Arabidopsis thaliana and expression in fungal elicitor-treated cells
-
10.1007/BF00019954, 8425063
-
Trezzini GF, Horrichs A, Somssich I,E. Isolation of putative defense-related genes from Arabidopsis thaliana and expression in fungal elicitor-treated cells. Plant Mol Biol 1993, 21:385-389. 10.1007/BF00019954, 8425063.
-
(1993)
Plant Mol Biol
, vol.21
, pp. 385-389
-
-
Trezzini, G.F.1
Horrichs, A.2
Somssich, I.E.3
-
18
-
-
0345492328
-
Non-self recognition, transcriptional reprogramming, and secondary metabolite accumulation during plant/pathogen interactions
-
10.1073/pnas.0831246100, 304120, 12704242
-
Hahlbrock K, Bednarek P, Ciolkowski I, Hamberger B, Heise A, Liedgens H, Logemann E, Nürnberger T, Schmelzer E, Somssich IE, et al. Non-self recognition, transcriptional reprogramming, and secondary metabolite accumulation during plant/pathogen interactions. Proc Natl Acad Sci USA 2003, 100:14569-14576. 10.1073/pnas.0831246100, 304120, 12704242.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 14569-14576
-
-
Hahlbrock, K.1
Bednarek, P.2
Ciolkowski, I.3
Hamberger, B.4
Heise, A.5
Liedgens, H.6
Logemann, E.7
Nürnberger, T.8
Schmelzer, E.9
Somssich, I.E.10
-
19
-
-
77957786100
-
Gene-specific RNA polymerase II phosphorylation and the CTD code
-
10.1038/nsmb.1913, 3048030, 20835241
-
Kim H, Erickson B, Luo W, Seward D, Graber JH, Pollock DD, Megee PC, Bentley DL. Gene-specific RNA polymerase II phosphorylation and the CTD code. Nat Struct Mol Biol 2010, 17:1279-1286. 10.1038/nsmb.1913, 3048030, 20835241.
-
(2010)
Nat Struct Mol Biol
, vol.17
, pp. 1279-1286
-
-
Kim, H.1
Erickson, B.2
Luo, W.3
Seward, D.4
Graber, J.H.5
Pollock, D.D.6
Megee, P.C.7
Bentley, D.L.8
-
20
-
-
0037381011
-
In vivo characterization of regulatory polymorphisms by allele-specific quantification of RNA polymerase loading
-
10.1038/ng1124, 12627232
-
Knight JC, Keating BJ, Rockett KA, Kwiatkowski DP. In vivo characterization of regulatory polymorphisms by allele-specific quantification of RNA polymerase loading. Nat Genet 2003, 33:469-475. 10.1038/ng1124, 12627232.
-
(2003)
Nat Genet
, vol.33
, pp. 469-475
-
-
Knight, J.C.1
Keating, B.J.2
Rockett, K.A.3
Kwiatkowski, D.P.4
-
21
-
-
0034307008
-
Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription
-
10.1101/gad.824700, 316976, 11018013
-
Komarnitsky P, Cho E-J, Buratowski S. Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription. Genes Dev 2000, 14:2452-2460. 10.1101/gad.824700, 316976, 11018013.
-
(2000)
Genes Dev
, vol.14
, pp. 2452-2460
-
-
Komarnitsky, P.1
Cho, E.-J.2
Buratowski, S.3
-
22
-
-
77951920690
-
C-Myc regulates transcriptional pause release
-
10.1016/j.cell.2010.03.030, 2864022, 20434984
-
Rahl PB, Lin CY, Seila AC, Flynn RA, McCuine S, Burge CB, Sharp PA, Young RA. c-Myc regulates transcriptional pause release. Cell 2010, 141:432-445. 10.1016/j.cell.2010.03.030, 2864022, 20434984.
-
(2010)
Cell
, vol.141
, pp. 432-445
-
-
Rahl, P.B.1
Lin, C.Y.2
Seila, A.C.3
Flynn, R.A.4
McCuine, S.5
Burge, C.B.6
Sharp, P.A.7
Young, R.A.8
-
23
-
-
70449641057
-
Progression through the RNA polymerase II CTD cycle
-
10.1016/j.molcel.2009.10.019, 3232742, 19941815
-
Buratowski S. Progression through the RNA polymerase II CTD cycle. Mol Cell 2009, 36:541-546. 10.1016/j.molcel.2009.10.019, 3232742, 19941815.
-
(2009)
Mol Cell
, vol.36
, pp. 541-546
-
-
Buratowski, S.1
-
24
-
-
79952291949
-
Two distinct roles of ARABIDOPSIS HOMOLOG OF TRITHORAX1 (ATX1) at promoters and within transcribed regions of ATX1-regulated genes
-
10.1105/tpc.110.080150, 3051232, 21266657
-
Ding Y, Avramova Z, Fromm M. Two distinct roles of ARABIDOPSIS HOMOLOG OF TRITHORAX1 (ATX1) at promoters and within transcribed regions of ATX1-regulated genes. Plant Cell 2011, 23:350-363. 10.1105/tpc.110.080150, 3051232, 21266657.
-
(2011)
Plant Cell
, vol.23
, pp. 350-363
-
-
Ding, Y.1
Avramova, Z.2
Fromm, M.3
-
25
-
-
84867160564
-
The RNA polymerase II CTD coordinates transcription and RNA processing
-
10.1101/gad.200303.112, 3465734, 23028141
-
Hsin J-P, Manley JL. The RNA polymerase II CTD coordinates transcription and RNA processing. Genes Dev 2012, 26:2119-2137. 10.1101/gad.200303.112, 3465734, 23028141.
-
(2012)
Genes Dev
, vol.26
, pp. 2119-2137
-
-
Hsin, J.-P.1
Manley, J.L.2
-
26
-
-
0027967403
-
High affinity binding of a fungal oligopeptide elicitor to parsley plasma membranes triggers multiple defense responses
-
10.1016/0092-8674(94)90423-5, 8062387
-
Nürnberger T, Nennstiel D, Jabs T, Sacks W, Hahlbrock K, Scheel D. High affinity binding of a fungal oligopeptide elicitor to parsley plasma membranes triggers multiple defense responses. Cell 1994, 78:449-460. 10.1016/0092-8674(94)90423-5, 8062387.
-
(1994)
Cell
, vol.78
, pp. 449-460
-
-
Nürnberger, T.1
Nennstiel, D.2
Jabs, T.3
Sacks, W.4
Hahlbrock, K.5
Scheel, D.6
-
27
-
-
0033066691
-
Synthetic muscle promoters: activities exceeding naturally occurring regulatory sequences
-
10.1038/6981, 10096290
-
Li X, Eastman EM, Schwartz RJ, Draghia-Akli R. Synthetic muscle promoters: activities exceeding naturally occurring regulatory sequences. Nat Biotechnol 1999, 17:241-246. 10.1038/6981, 10096290.
-
(1999)
Nat Biotechnol
, vol.17
, pp. 241-246
-
-
Li, X.1
Eastman, E.M.2
Schwartz, R.J.3
Draghia-Akli, R.4
-
28
-
-
34248562390
-
Monitoring circadian rhythms in Arabidopsis thaliana using luciferase reporter genes
-
Totowa, NJ: Humana Press, Rosato E, 362
-
Hall A, Brown P. Monitoring circadian rhythms in Arabidopsis thaliana using luciferase reporter genes. Circadian rhythms: methods and protocols 2007, 143-152. Totowa, NJ: Humana Press, Rosato E, 362.
-
(2007)
Circadian rhythms: methods and protocols
, pp. 143-152
-
-
Hall, A.1
Brown, P.2
-
29
-
-
5144224201
-
Arabidopsis C-terminal domain phosphatase-like 1 and 2 are essential Ser-5-specific C-terminal domain phosphatases
-
10.1073/pnas.0403174101, 521950, 15388846
-
Koiwa H, Hausmann S, Bang WY, Ueda A, Kondo N, Hiraguri A, Fukuhara T, Bahk JD, Yun D-J, Bressan RA, et al. Arabidopsis C-terminal domain phosphatase-like 1 and 2 are essential Ser-5-specific C-terminal domain phosphatases. Proc Natl Acad Sci USA 2004, 101:14539-14544. 10.1073/pnas.0403174101, 521950, 15388846.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 14539-14544
-
-
Koiwa, H.1
Hausmann, S.2
Bang, W.Y.3
Ueda, A.4
Kondo, N.5
Hiraguri, A.6
Fukuhara, T.7
Bahk, J.D.8
Yun, D.-J.9
Bressan, R.A.10
-
30
-
-
0029615513
-
Gene activation by UV light, fungal elicitor or fungal infection in petroselinum crispum is correlated with repression of cell cycle-related genes
-
10.1046/j.1365-313X.1995.8060865.x, 8580959
-
Logemann E, Wu S-C, Schröder J, Schmelzer E, Somssich IE, Hahlbrock K. Gene activation by UV light, fungal elicitor or fungal infection in petroselinum crispum is correlated with repression of cell cycle-related genes. Plant J 1995, 8:865-876. 10.1046/j.1365-313X.1995.8060865.x, 8580959.
-
(1995)
Plant J
, vol.8
, pp. 865-876
-
-
Logemann, E.1
Wu, S.-C.2
Schröder, J.3
Schmelzer, E.4
Somssich, I.E.5
Hahlbrock, K.6
-
31
-
-
0032031346
-
Pathogen defence in plants - a paradigm of biological complexity
-
Somssich IE, Hahlbrock K. Pathogen defence in plants - a paradigm of biological complexity. Trends Plant Sci 1998, 3:86-90.
-
(1998)
Trends Plant Sci
, vol.3
, pp. 86-90
-
-
Somssich, I.E.1
Hahlbrock, K.2
-
32
-
-
67650074197
-
Efficient frequency-based de novo short-read clustering for error trimming in next-generation sequencing
-
10.1101/gr.089151.108, 2704438, 19439514
-
Qu W, Hashimoto S-I, Morishita S. Efficient frequency-based de novo short-read clustering for error trimming in next-generation sequencing. Genome Res 2009, 19:1309-1315. 10.1101/gr.089151.108, 2704438, 19439514.
-
(2009)
Genome Res
, vol.19
, pp. 1309-1315
-
-
Qu, W.1
Hashimoto, S.-I.2
Morishita, S.3
-
33
-
-
33747823564
-
MEME: discovering and analyzing DNA and protein sequence motifs
-
10.1093/nar/gkl198, 1538909, 16845028
-
Bailey TL, Williams N, Misleh C, Li WW. MEME: discovering and analyzing DNA and protein sequence motifs. Nucleic Acids Res 2006, 34:W369-W373. 10.1093/nar/gkl198, 1538909, 16845028.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Bailey, T.L.1
Williams, N.2
Misleh, C.3
Li, W.W.4
-
34
-
-
0032918558
-
Plant cis-acting regulatory DNA elements (PLACE) database
-
10.1093/nar/27.1.297, 148163, 9847208
-
Higo K, Ugawa Y, Iwamoto M, Korenaga T. Plant cis-acting regulatory DNA elements (PLACE) database. Nucleic Acids Res 1999, 27:297-300. 10.1093/nar/27.1.297, 148163, 9847208.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 297-300
-
-
Higo, K.1
Ugawa, Y.2
Iwamoto, M.3
Korenaga, T.4
-
35
-
-
84865060938
-
Discovery of stress responsive DNA regulatory motifs in Arabidopsis
-
10.1371/journal.pone.0043198, 3418279, 22912824
-
Ma S, Bachan S, Porto M, Bohnert HJ, Snyder M, Dinesh-Kumar SP. Discovery of stress responsive DNA regulatory motifs in Arabidopsis. PLoS One 2012, 7:e43198. 10.1371/journal.pone.0043198, 3418279, 22912824.
-
(2012)
PLoS One
, vol.7
-
-
Ma, S.1
Bachan, S.2
Porto, M.3
Bohnert, H.J.4
Snyder, M.5
Dinesh-Kumar, S.P.6
-
36
-
-
84888866089
-
Pathogen-responsive cis-elements
-
London New York: Springer Dordrecht Heidelberg, Mérillon JM, Ramawat KG, Progress in Biological Control Vol. 12
-
Yuan T, Wang S. Pathogen-responsive cis-elements. Plant Defence: Biological Control 2012, 363-378. London New York: Springer Dordrecht Heidelberg, Mérillon JM, Ramawat KG, Progress in Biological Control Vol. 12.
-
(2012)
Plant Defence: Biological Control
, pp. 363-378
-
-
Yuan, T.1
Wang, S.2
-
37
-
-
84863229330
-
Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay
-
10.1038/nbt.2137, 3297981, 22371084
-
Melnikov A, Murugan A, Zhang X, Tesileanu T, Wang L, Rogov P, Feizi S, Gnirke A, Callan CG, Kinney JB, et al. Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay. Nat Biotechnol 2012, 30:271-277. 10.1038/nbt.2137, 3297981, 22371084.
-
(2012)
Nat Biotechnol
, vol.30
, pp. 271-277
-
-
Melnikov, A.1
Murugan, A.2
Zhang, X.3
Tesileanu, T.4
Wang, L.5
Rogov, P.6
Feizi, S.7
Gnirke, A.8
Callan, C.G.9
Kinney, J.B.10
-
38
-
-
84863230316
-
Massively parallel functional dissection of mammalian enhancers in vivo
-
10.1038/nbt.2136, 3402344, 22371081
-
Patwardhan RP, Hiatt JB, Witten DM, Kim MJ, Smith RP, May D, Lee C, Andrie JM, Lee S-I, Cooper GM, et al. Massively parallel functional dissection of mammalian enhancers in vivo. Nat Biotechnol 2012, 30:265-270. 10.1038/nbt.2136, 3402344, 22371081.
-
(2012)
Nat Biotechnol
, vol.30
, pp. 265-270
-
-
Patwardhan, R.P.1
Hiatt, J.B.2
Witten, D.M.3
Kim, M.J.4
Smith, R.P.5
May, D.6
Lee, C.7
Andrie, J.M.8
Lee, S.-I.9
Cooper, G.M.10
-
39
-
-
77956431323
-
Biotic stress globally downregulates photosynthesis genes
-
10.1111/j.1365-3040.2010.02167.x, 20444224
-
Bilgin DD, Zavala JA, Zhu JIN, Clough SJ, Ort DR, DeLucia EH. Biotic stress globally downregulates photosynthesis genes. Plant Cell Environ 2010, 33:1597-1613. 10.1111/j.1365-3040.2010.02167.x, 20444224.
-
(2010)
Plant Cell Environ
, vol.33
, pp. 1597-1613
-
-
Bilgin, D.D.1
Zavala, J.A.2
Zhu, J.I.N.3
Clough, S.J.4
Ort, D.R.5
DeLucia, E.H.6
-
40
-
-
0037133178
-
Crosstalk among stress responses in plants: pathogen defense overrides UV protection through an inversely regulated ACE/ACE type of light-responsive gene promoter unit
-
10.1073/pnas.042692199, 122381, 11842215
-
Logemann E, Hahlbrock K. Crosstalk among stress responses in plants: pathogen defense overrides UV protection through an inversely regulated ACE/ACE type of light-responsive gene promoter unit. Proc Natl Acad Sci USA 2002, 99:2428-2432. 10.1073/pnas.042692199, 122381, 11842215.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 2428-2432
-
-
Logemann, E.1
Hahlbrock, K.2
-
41
-
-
70350786920
-
Receptor quality control in the endoplasmic reticulum for plant innate immunity
-
10.1038/emboj.2009.263, 2776098, 19763087
-
Saijo Y, Tintor N, Lu X, Rauf P, Pajerowska-Mukhtar K, Haweker H, Dong X, Robatzek S, Schulze-Lefert P. Receptor quality control in the endoplasmic reticulum for plant innate immunity. EMBO J 2009, 28:3439-3449. 10.1038/emboj.2009.263, 2776098, 19763087.
-
(2009)
EMBO J
, vol.28
, pp. 3439-3449
-
-
Saijo, Y.1
Tintor, N.2
Lu, X.3
Rauf, P.4
Pajerowska-Mukhtar, K.5
Haweker, H.6
Dong, X.7
Robatzek, S.8
Schulze-Lefert, P.9
-
42
-
-
80053635199
-
Crosstalk between abiotic ultraviolet-B stress and biotic (flg22) stress signalling in Arabidopsis prevents flavonol accumulation in favor of pathogen defence compound production
-
10.1111/j.1365-3040.2011.02381.x, 21707654
-
Schenke D, Bottcher C, Scheel D. Crosstalk between abiotic ultraviolet-B stress and biotic (flg22) stress signalling in Arabidopsis prevents flavonol accumulation in favor of pathogen defence compound production. Plant Cell Environ 2011, 34:1849-1864. 10.1111/j.1365-3040.2011.02381.x, 21707654.
-
(2011)
Plant Cell Environ
, vol.34
, pp. 1849-1864
-
-
Schenke, D.1
Bottcher, C.2
Scheel, D.3
-
43
-
-
84871699564
-
Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans
-
10.1038/nrg3293, 3552498, 22986266
-
Adelman K, Lis JT. Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans. Nat Rev Genet 2012, 13:720-731. 10.1038/nrg3293, 3552498, 22986266.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 720-731
-
-
Adelman, K.1
Lis, J.T.2
-
44
-
-
0030975671
-
Constitutive transcriptional activation by a β-catenin-Tcf complex in APC-/-colon carcinoma
-
10.1126/science.275.5307.1784, 9065401
-
Korinek V, Barker N, Morin PJ, van Wichen D, de Weger R, Kinzler KW, Vogelstein B, Clevers H. Constitutive transcriptional activation by a β-catenin-Tcf complex in APC-/-colon carcinoma. Science 1997, 275:1784-1787. 10.1126/science.275.5307.1784, 9065401.
-
(1997)
Science
, vol.275
, pp. 1784-1787
-
-
Korinek, V.1
Barker, N.2
Morin, P.J.3
van Wichen, D.4
de Weger, R.5
Kinzler, K.W.6
Vogelstein, B.7
Clevers, H.8
-
45
-
-
84862002321
-
Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters
-
10.1038/nbt.2205, 3374032, 22609971
-
Sharon E, Kalma Y, Sharp A, Raveh-Sadka T, Levo M, Zeevi D, Keren L, Yakhini Z, Weinberger A, Segal E. Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters. Nat Biotechnol 2012, 30:521-530. 10.1038/nbt.2205, 3374032, 22609971.
-
(2012)
Nat Biotechnol
, vol.30
, pp. 521-530
-
-
Sharon, E.1
Kalma, Y.2
Sharp, A.3
Raveh-Sadka, T.4
Levo, M.5
Zeevi, D.6
Keren, L.7
Yakhini, Z.8
Weinberger, A.9
Segal, E.10
-
46
-
-
0033136465
-
Plants have a sensitive perception system for the most conserved domain of bacterial flagellin
-
10.1046/j.1365-313X.1999.00265.x, 10377992
-
Felix G, Duran JD, Volko S, Boller T. Plants have a sensitive perception system for the most conserved domain of bacterial flagellin. Plant J 1999, 18:265-276. 10.1046/j.1365-313X.1999.00265.x, 10377992.
-
(1999)
Plant J
, vol.18
, pp. 265-276
-
-
Felix, G.1
Duran, J.D.2
Volko, S.3
Boller, T.4
-
47
-
-
0022479114
-
Cloning of random-sequence Oligodeoxynucleotides
-
10.1016/0378-1119(86)90180-0, 3023181
-
Oliphant AR, Nussbaum AL, Struhl K. Cloning of random-sequence Oligodeoxynucleotides. Gene 1986, 44:177-183. 10.1016/0378-1119(86)90180-0, 3023181.
-
(1986)
Gene
, vol.44
, pp. 177-183
-
-
Oliphant, A.R.1
Nussbaum, A.L.2
Struhl, K.3
-
48
-
-
0032821353
-
A 69 bp fragment in the pyrroline-5-carboxylate Reductase promoter of Arabidopsis thaliana activates minimal CaMV 35S promoter in a tissue-specific manner
-
10.1016/S0014-5793(99)01110-2, 10481064
-
Hua X, van de Cotte B, Van Montagu M, Verbruggen N. A 69 bp fragment in the pyrroline-5-carboxylate Reductase promoter of Arabidopsis thaliana activates minimal CaMV 35S promoter in a tissue-specific manner. FEBS Lett 1999, 458:193-196. 10.1016/S0014-5793(99)01110-2, 10481064.
-
(1999)
FEBS Lett
, vol.458
, pp. 193-196
-
-
Hua, X.1
van de Cotte, B.2
Van Montagu, M.3
Verbruggen, N.4
-
49
-
-
0001331495
-
Parsley protoplasts retain differential responsiveness to UV light and fungal elicitor
-
553673, 16453792
-
Dangl JL, Hauffe K-D, Lipphardt S, Hahlbrock K, Scheel D. Parsley protoplasts retain differential responsiveness to UV light and fungal elicitor. EMBO J 1987, 6:2551-2556. 553673, 16453792.
-
(1987)
EMBO J
, vol.6
, pp. 2551-2556
-
-
Dangl, J.L.1
Hauffe, K.-D.2
Lipphardt, S.3
Hahlbrock, K.4
Scheel, D.5
-
50
-
-
0032447801
-
Floral dip: a simplified method for agrobacterium-mediated transformation of Arabidopsis thaliana
-
10.1046/j.1365-313x.1998.00343.x, 10069079
-
Clough SJ, Bent AF. Floral dip: a simplified method for agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 1998, 16:735-743. 10.1046/j.1365-313x.1998.00343.x, 10069079.
-
(1998)
Plant J
, vol.16
, pp. 735-743
-
-
Clough, S.J.1
Bent, A.F.2
-
51
-
-
79958296340
-
Chromatin immunoprecipitation to identify global targets of WRKY transcription factor family members involved in plant immunity
-
New York: Humana Press, McDowell JM, 712
-
Roccaro M, Somssich IE. Chromatin immunoprecipitation to identify global targets of WRKY transcription factor family members involved in plant immunity. Plant immunity - methods and protocols 2011, 45-58. New York: Humana Press, McDowell JM, 712.
-
(2011)
Plant immunity - methods and protocols
, pp. 45-58
-
-
Roccaro, M.1
Somssich, I.E.2
-
52
-
-
0025831356
-
SIGNAL SCAN: a computer program that scans DNA sequences for eukaryotic transcriptional elements
-
Prestridge DS. SIGNAL SCAN: a computer program that scans DNA sequences for eukaryotic transcriptional elements. Comput Appl Biosci 1991, 7:203-206.
-
(1991)
Comput Appl Biosci
, vol.7
, pp. 203-206
-
-
Prestridge, D.S.1
|