-
1
-
-
0037080769
-
Shy1p is necessary for full expression of mitochondrial COX1 in the yeast model of Leigh's syndrome
-
Barrientos A, Korr D, Tzagoloff A. 2002. Shy1p is necessary for full expression of mitochondrial COX1 in the yeast model of Leigh's syndrome. EMBO J 21:43-52.
-
(2002)
EMBO J
, vol.21
, pp. 43-52
-
-
Barrientos, A.1
Korr, D.2
Tzagoloff, A.3
-
2
-
-
75749093396
-
Evaluation of the mitochondrial respiratory chain and oxidative phosphorylation system using polarography and spectrophotometric enzyme assays
-
Barrientos A, Fontanesi F, Díaz F. 2009. Evaluation of the mitochondrial respiratory chain and oxidative phosphorylation system using polarography and spectrophotometric enzyme assays. Curr Protoc Hum Genet 19:19.3.
-
(2009)
Curr Protoc Hum Genet
, vol.19
, pp. 193
-
-
Barrientos, A.1
Fontanesi, F.2
Díaz, F.3
-
3
-
-
0025785410
-
A family of low and high copy replicative, integrative and single-stranded S. cerevisiae/E. coli shuttle vectors
-
Bonneaud N, Ozier-Kalogeropoulos O, Li GY, Labouesse M, Minvielle-Sebastia L, Lacroute F. 1991. A family of low and high copy replicative, integrative and single-stranded S. cerevisiae/E. coli shuttle vectors. Yeast 7:609-615.
-
(1991)
Yeast
, vol.7
, pp. 609-615
-
-
Bonneaud, N.1
Ozier-Kalogeropoulos, O.2
Li, G.Y.3
Labouesse, M.4
Minvielle-Sebastia, L.5
Lacroute, F.6
-
4
-
-
9644275464
-
Clinical and molecular findings in children with complex I deficiency
-
Bugiani M, Invernizzi F, Alberio S, Briem E, Lamantea E, Carrara F, Moroni I, Farina L, Spada M, Donati MA, Uziel G, Zeviani M. 2004. Clinical and molecular findings in children with complex I deficiency. Biochim Biophys Acta 1659:136-147.
-
(2004)
Biochim Biophys Acta
, vol.1659
, pp. 136-147
-
-
Bugiani, M.1
Invernizzi, F.2
Alberio, S.3
Briem, E.4
Lamantea, E.5
Carrara, F.6
Moroni, I.7
Farina, L.8
Spada, M.9
Donati, M.A.10
Uziel, G.11
Zeviani, M.12
-
5
-
-
0032561194
-
MTO1 codes for a mitochondrial protein required for respiration in paromomycin-resistant mutants of Saccharomyces cerevisiae
-
Colby G, Wu M, Tzagoloff A. 1998. MTO1 codes for a mitochondrial protein required for respiration in paromomycin-resistant mutants of Saccharomyces cerevisiae. J Biol Chem 273:27945-27952.
-
(1998)
J Biol Chem
, vol.273
, pp. 27945-27952
-
-
Colby, G.1
Wu, M.2
Tzagoloff, A.3
-
7
-
-
40549085695
-
Transcriptional activators HAP/NF-Y rescue a cytochrome c oxidase defect in yeast and human cells
-
Fontanesi F, Jin C, Tzagoloff A, Barrientos A. 2008. Transcriptional activators HAP/NF-Y rescue a cytochrome c oxidase defect in yeast and human cells. Hum Mol Genet 17:775-788.
-
(2008)
Hum Mol Genet
, vol.17
, pp. 775-788
-
-
Fontanesi, F.1
Jin, C.2
Tzagoloff, A.3
Barrientos, A.4
-
8
-
-
84862129211
-
Mutations of the mitochondrial-tRNA modifier MTO1 cause hypertrophic cardiomyopathy and lactic acidosis
-
Ghezzi D, Baruffini E, Haack TB, Invernizzi F, Melchionda L, Dallabona C, Strom TM, Parini R, Burlina AB, Meitinger T, Prokisch H, Ferrero I, Zeviani M. 2012. Mutations of the mitochondrial-tRNA modifier MTO1 cause hypertrophic cardiomyopathy and lactic acidosis. Am J Hum Genet 90:1079-1087.
-
(2012)
Am J Hum Genet
, vol.90
, pp. 1079-1087
-
-
Ghezzi, D.1
Baruffini, E.2
Haack, T.B.3
Invernizzi, F.4
Melchionda, L.5
Dallabona, C.6
Strom, T.M.7
Parini, R.8
Burlina, A.B.9
Meitinger, T.10
Prokisch, H.11
Ferrero, I.12
Zeviani, M.13
-
9
-
-
0036270543
-
Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol method
-
Gietz RD, Woods RA. 2002. Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol method. Methods Enzymol 350:87-96.
-
(2002)
Methods Enzymol
, vol.350
, pp. 87-96
-
-
Gietz, R.D.1
Woods, R.A.2
-
10
-
-
65449185779
-
Functional study in a yeast model of a novel succinate dehydrogenase subunit B gene germline missense mutation (C191Y) diagnosed in a patient affected by a glomus tumor
-
Goffrini P, Ercolino T, Panizza E, Giachè V, Cavone L, Chiarugi A, Dima V, Ferrero I, Mannelli M. 2009. Functional study in a yeast model of a novel succinate dehydrogenase subunit B gene germline missense mutation (C191Y) diagnosed in a patient affected by a glomus tumor. Hum Mol Genet 18:1860-1868.
-
(2009)
Hum Mol Genet
, vol.18
, pp. 1860-1868
-
-
Goffrini, P.1
Ercolino, T.2
Panizza, E.3
Giachè, V.4
Cavone, L.5
Chiarugi, A.6
Dima, V.7
Ferrero, I.8
Mannelli, M.9
-
11
-
-
0024520745
-
Site-directed mutagenesis by overlap extension using the polymerase chain reaction
-
Ho SN, Hunt HD, Horton RM, Pullen JK, Pease LR. 1989. Site-directed mutagenesis by overlap extension using the polymerase chain reaction. Gene 77:51-59.
-
(1989)
Gene
, vol.77
, pp. 51-59
-
-
Ho, S.N.1
Hunt, H.D.2
Horton, R.M.3
Pullen, J.K.4
Pease, L.R.5
-
12
-
-
84858004724
-
Microscale oxygraphy reveals OXPHOS impairment in MRC mutant cells
-
Invernizzi F, D'Amato I, Jensen PB, Ravaglia S, Zeviani M, Tiranti V. 2012. Microscale oxygraphy reveals OXPHOS impairment in MRC mutant cells. Mitochondrion 12:328-335.
-
(2012)
Mitochondrion
, vol.12
, pp. 328-335
-
-
Invernizzi, F.1
D'Amato, I.2
Jensen, P.B.3
Ravaglia, S.4
Zeviani, M.5
Tiranti, V.6
-
13
-
-
0041490850
-
Aminoacylation of hypomodified tRNAGlu in vivo
-
Krüger MK, Sørensen MA. 1998. Aminoacylation of hypomodified tRNAGlu in vivo. J Mol Biol 284:609-620.
-
(1998)
J Mol Biol
, vol.284
, pp. 609-620
-
-
Krüger, M.K.1
Sørensen, M.A.2
-
14
-
-
67349139921
-
Biochemical consequences in yeast of the human mitochondrial DNA 8993T>C mutation in the ATPase6 gene found in NARP/MILS patients
-
Kucharczyk R, Rak M, Di Rago JP. 2009. Biochemical consequences in yeast of the human mitochondrial DNA 8993T>C mutation in the ATPase6 gene found in NARP/MILS patients. Biochim Biophys Acta 1793:817-824.
-
(2009)
Biochim Biophys Acta
, vol.1793
, pp. 817-824
-
-
Kucharczyk, R.1
Rak, M.2
Di Rago, J.P.3
-
15
-
-
48349090037
-
Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U.G wobble pairing during decoding
-
Kurata S, Weixlbaumer A, Ohtsuki T, Shimazaki T, Wada T, Kirino Y, Takai K, Watanabe K, Ramakrishnan V, Suzuki T. 2008. Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U.G wobble pairing during decoding. J Biol Chem 283:18801-18811.
-
(2008)
J Biol Chem
, vol.283
, pp. 18801-18811
-
-
Kurata, S.1
Weixlbaumer, A.2
Ohtsuki, T.3
Shimazaki, T.4
Wada, T.5
Kirino, Y.6
Takai, K.7
Watanabe, K.8
Ramakrishnan, V.9
Suzuki, T.10
-
16
-
-
44949138270
-
Crystal structures of the conserved tRNA-modifying enzyme GidA: implications for its interaction with MnmE and substrate
-
Meyer S, Scrima A, Versées W, Wittinghofer A. 2008. Crystal structures of the conserved tRNA-modifying enzyme GidA: implications for its interaction with MnmE and substrate. J Mol Biol 380:532-547.
-
(2008)
J Mol Biol
, vol.380
, pp. 532-547
-
-
Meyer, S.1
Scrima, A.2
Versées, W.3
Wittinghofer, A.4
-
18
-
-
0032932638
-
Function, mechanism and regulation of bacterial ribonucleases
-
Nicholson AW. 1999. Function, mechanism and regulation of bacterial ribonucleases. FEMS Microbiol Rev 23:371-390.
-
(1999)
FEMS Microbiol Rev
, vol.23
, pp. 371-390
-
-
Nicholson, A.W.1
-
19
-
-
65149088650
-
Conserved cysteine residues of GidA are essential for biogenesis of 5-carboxymethylaminomethyluridine at tRNA anticodon
-
Osawa T, Ito K, Inanaga H, Nureki O, Tomita K, Numata T. 2009. Conserved cysteine residues of GidA are essential for biogenesis of 5-carboxymethylaminomethyluridine at tRNA anticodon. Structure 17:713-724.
-
(2009)
Structure
, vol.17
, pp. 713-724
-
-
Osawa, T.1
Ito, K.2
Inanaga, H.3
Nureki, O.4
Tomita, K.5
Numata, T.6
-
20
-
-
44349146074
-
Sequence-structure-function analysis of the bifunctional enzyme MnmC that catalyses the last two steps in the biosynthesis of hypermodified nucleoside mnm5s2U in tRNA
-
Roovers M, Oudjama Y, Kaminska KH, Purta E, Caillet J, Droogmans L, Bujnicki JM. 2008. Sequence-structure-function analysis of the bifunctional enzyme MnmC that catalyses the last two steps in the biosynthesis of hypermodified nucleoside mnm5s2U in tRNA. Proteins 71:2076-2085.
-
(2008)
Proteins
, vol.71
, pp. 2076-2085
-
-
Roovers, M.1
Oudjama, Y.2
Kaminska, K.H.3
Purta, E.4
Caillet, J.5
Droogmans, L.6
Bujnicki, J.M.7
-
21
-
-
79960555933
-
Human diseases with impaired mitochondrial protein synthesis
-
Rötig A. 2011. Human diseases with impaired mitochondrial protein synthesis. Biochim Biophys Acta 1807:1198-1205.
-
(2011)
Biochim Biophys Acta
, vol.1807
, pp. 1198-1205
-
-
Rötig, A.1
-
22
-
-
81255169321
-
The 2-thiouridylase function of the human MTU1 (TRMU) enzyme is dispensable for mitochondrial translation
-
Sasarman F, Antonicka H, Horvath R, Shoubridge EA. 2011. The 2-thiouridylase function of the human MTU1 (TRMU) enzyme is dispensable for mitochondrial translation. Hum Mol Genet 20:4634-4643.
-
(2011)
Hum Mol Genet
, vol.20
, pp. 4634-4643
-
-
Sasarman, F.1
Antonicka, H.2
Horvath, R.3
Shoubridge, E.A.4
-
23
-
-
72449211907
-
Structure-function analysis of Escherichia coli MnmG (GidA), a highly conserved tRNA-modifying enzyme
-
Shi R, Villarroya M, Ruiz-Partida R, Li Y, Proteau A, Prado S, Moukadiri I, Benítez-Páez A, Lomas R, Wagner J, Matte A, Velázquez-Campoy A, et al. 2009. Structure-function analysis of Escherichia coli MnmG (GidA), a highly conserved tRNA-modifying enzyme. J Bacteriol 191:7614-7619.
-
(2009)
J Bacteriol
, vol.191
, pp. 7614-7619
-
-
Shi, R.1
Villarroya, M.2
Ruiz-Partida, R.3
Li, Y.4
Proteau, A.5
Prado, S.6
Moukadiri, I.7
Benítez-Páez, A.8
Lomas, R.9
Wagner, J.10
Matte, A.11
Velázquez-Campoy, A.12
-
24
-
-
71749086467
-
Synthesis of cytochrome c oxidase subunit 1 is translationally downregulated in the absence of functional F1F0-ATP synthase
-
Soto IC, Fontanesi F, Valledor M, Horn D, Singh R, Barrientos A. 2009. Synthesis of cytochrome c oxidase subunit 1 is translationally downregulated in the absence of functional F1F0-ATP synthase. Biochim Biophys Acta 1793:1776-1786.
-
(2009)
Biochim Biophys Acta
, vol.1793
, pp. 1776-1786
-
-
Soto, I.C.1
Fontanesi, F.2
Valledor, M.3
Horn, D.4
Singh, R.5
Barrientos, A.6
-
25
-
-
80755169463
-
Human mitochondrial tRNAs: biogenesis, function, structural aspects, and diseases
-
Suzuki T, Nagao A, Suzuki T. 2011. Human mitochondrial tRNAs: biogenesis, function, structural aspects, and diseases. Annu Rev Genet 45:299-329.
-
(2011)
Annu Rev Genet
, vol.45
, pp. 299-329
-
-
Suzuki, T.1
Nagao, A.2
Suzuki, T.3
-
26
-
-
0027273985
-
A 2-thiouridine derivative in tRNAGlu is a positive determinant for aminoacylation by Escherichia coli glutamyl-tRNA synthetase
-
Sylvers LA, Rogers KC, Shimizu M, Ohtsuka E, Söll D. 1993. A 2-thiouridine derivative in tRNAGlu is a positive determinant for aminoacylation by Escherichia coli glutamyl-tRNA synthetase. Biochemistry 32:3836-3841.
-
(1993)
Biochemistry
, vol.32
, pp. 3836-3841
-
-
Sylvers, L.A.1
Rogers, K.C.2
Shimizu, M.3
Ohtsuka, E.4
Söll, D.5
-
27
-
-
39049176454
-
Possible conformations of 5-aminomethyluridine derivatives recognizing a G at the third position of the codon
-
Takai K. 2005. Possible conformations of 5-aminomethyluridine derivatives recognizing a G at the third position of the codon. Nucleic Acids Symp Ser (Oxf) 49:317-318.
-
(2005)
Nucleic Acids Symp Ser (Oxf)
, vol.49
, pp. 317-318
-
-
Takai, K.1
-
28
-
-
12544259245
-
Mitochondria-specific RNA-modifying enzymes responsible for the biosynthesis of the wobble base in mitochondrial tRNAs. Implications for the molecular pathogenesis of human mitochondrial diseases
-
Umeda N, Suzuki T, Yukawa M, Ohya Y, Shindo H, Watanabe K, Suzuki T. 2005. Mitochondria-specific RNA-modifying enzymes responsible for the biosynthesis of the wobble base in mitochondrial tRNAs. Implications for the molecular pathogenesis of human mitochondrial diseases. J Biol Chem 280:1613-1624.
-
(2005)
J Biol Chem
, vol.280
, pp. 1613-1624
-
-
Umeda, N.1
Suzuki, T.2
Yukawa, M.3
Ohya, Y.4
Shindo, H.5
Watanabe, K.6
Suzuki, T.7
-
29
-
-
0035801515
-
Improvement of reading frame maintenance is a common function for several tRNA modifications
-
Urbonavicius J, Qian Q, Durand JM, Hagervall TG, Björk GR. 2001. Improvement of reading frame maintenance is a common function for several tRNA modifications. EMBO J 20:4863-4873.
-
(2001)
EMBO J
, vol.20
, pp. 4863-4873
-
-
Urbonavicius, J.1
Qian, Q.2
Durand, J.M.3
Hagervall, T.G.4
Björk, G.R.5
-
30
-
-
84867031832
-
Next-generation sequencing for mitochondrial diseases: a wide diagnostic spectrum
-
Vasta V, Merritt JL 2nd, Saneto RP, Hahn SH. 2012. Next-generation sequencing for mitochondrial diseases: a wide diagnostic spectrum. Pediatr Int 54:585-601.
-
(2012)
Pediatr Int
, vol.54
, pp. 585-601
-
-
Vasta, V.1
Merritt 2nd, J.L.2
Saneto, R.P.3
Hahn, S.H.4
-
31
-
-
73649147996
-
Combination of the loss of cmnm5U34 with the lack of s2U34 modifications of tRNALys, tRNAGlu, and tRNAGln altered mitochondrial biogenesis and respiration
-
Wang X, Yan Q, Guan MX. 2010. Combination of the loss of cmnm5U34 with the lack of s2U34 modifications of tRNALys, tRNAGlu, and tRNAGln altered mitochondrial biogenesis and respiration. J Mol Biol 395:1038-1048.
-
(2010)
J Mol Biol
, vol.395
, pp. 1038-1048
-
-
Wang, X.1
Yan, Q.2
Guan, M.X.3
-
32
-
-
23844437940
-
Mutations in MTO2 related to tRNA modification impair mitochondrial gene expression and protein synthesis in the presence of a paromomycin resistance mutation in mitochondrial 15 S rRNA
-
Yan Q, Li X, Faye G, Guan MX. 2005. Mutations in MTO2 related to tRNA modification impair mitochondrial gene expression and protein synthesis in the presence of a paromomycin resistance mutation in mitochondrial 15 S rRNA. J Biol Chem 280:29151-29157.
-
(2005)
J Biol Chem
, vol.280
, pp. 29151-29157
-
-
Yan, Q.1
Li, X.2
Faye, G.3
Guan, M.X.4
-
33
-
-
0034619490
-
Modified nucleoside dependent Watson-Crick and wobble codon binding by tRNALysUUU species
-
Yarian C, Marszalek M, Sochacka E, Malkiewicz A, Guenther R, Miskiewicz A, Agris PF. 2000. Modified nucleoside dependent Watson-Crick and wobble codon binding by tRNALysUUU species. Biochemistry 39:13390-13395.
-
(2000)
Biochemistry
, vol.39
, pp. 13390-13395
-
-
Yarian, C.1
Marszalek, M.2
Sochacka, E.3
Malkiewicz, A.4
Guenther, R.5
Miskiewicz, A.6
Agris, P.F.7
-
34
-
-
0037053384
-
Accurate translation of the genetic code depends on tRNA modified nucleosides
-
Yarian C, Townsend H, Czestkowski W, Sochacka E, Malkiewicz AJ, Guenther R, Miskiewicz A, Agris PF. 2002. Accurate translation of the genetic code depends on tRNA modified nucleosides. J Biol Chem 277:16391-16395.
-
(2002)
J Biol Chem
, vol.277
, pp. 16391-16395
-
-
Yarian, C.1
Townsend, H.2
Czestkowski, W.3
Sochacka, E.4
Malkiewicz, A.J.5
Guenther, R.6
Miskiewicz, A.7
Agris, P.F.8
-
35
-
-
0035801225
-
Wobble modification defect in tRNA disturbs codon-anticodon interaction in a mitochondrial disease
-
Yasukawa T, Suzuki T, Ishii N, Ohta S, Watanabe K. 2001. Wobble modification defect in tRNA disturbs codon-anticodon interaction in a mitochondrial disease. EMBO J 20:4794-4802.
-
(2001)
EMBO J
, vol.20
, pp. 4794-4802
-
-
Yasukawa, T.1
Suzuki, T.2
Ishii, N.3
Ohta, S.4
Watanabe, K.5
-
36
-
-
67650682434
-
Down-regulation of CXCR4 expression by SDF-KDEL in CD34(+) hematopoietic stem cells: an antihuman immunodeficiency virus strategy
-
Zhang JC, Sun L, Nie QH, Huang CX, Jia ZS, Wang JP, Lian JQ, Li XH, Wang PZ, Zhang Y, Zhuang Y, Sun YT, Bai X. 2009. Down-regulation of CXCR4 expression by SDF-KDEL in CD34(+) hematopoietic stem cells: an antihuman immunodeficiency virus strategy. J Virol Methods 16:30-37.
-
(2009)
J Virol Methods
, vol.16
, pp. 30-37
-
-
Zhang, J.C.1
Sun, L.2
Nie, Q.H.3
Huang, C.X.4
Jia, Z.S.5
Wang, J.P.6
Lian, J.Q.7
Li, X.H.8
Wang, P.Z.9
Zhang, Y.10
Zhuang, Y.11
Sun, Y.T.12
Bai, X.13
|