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Volumn 8, Issue 10, 2013, Pages 1101-1113

Initial characterization of histone H3 serine 10 O-acetylation

Author keywords

Chromatin; Epigenetics; Histone; Mass spectrometry; Post translational modifications; Proteomics; Quantitative; Stem cells

Indexed keywords

HISTONE H3; IMMUNOGLOBULIN G; KRUPPEL LIKE FACTOR 4; MYC PROTEIN; OCTAMER TRANSCRIPTION FACTOR 4; SERINE; TRANSCRIPTION FACTOR SOX2;

EID: 84884954743     PISSN: 15592294     EISSN: 15592308     Source Type: Journal    
DOI: 10.4161/epi.26025     Document Type: Article
Times cited : (23)

References (70)
  • 1
    • 73349092441 scopus 로고    scopus 로고
    • Histones: Annotating chromatin
    • PMID: 19886812
    • Campos EI, Reinberg D. Histones: annotating chromatin. Annu Rev Genet 2009; 43: 559-99; PMID: 19886812; http://dx. doi. org/10. 1146/annurev. genet. 032608. 103928
    • (2009) Annu Rev Genet , vol.43 , pp. 559-599
    • Campos, E.I.1    Reinberg, D.2
  • 2
    • 0035839136 scopus 로고    scopus 로고
    • Translating the histone code
    • PMID: 11498575
    • Jenuwein T, Allis CD. Translating the histone code. Science 2001; 293: 1074-80; PMID: 11498575; http://dx. doi. org/10. 1126/science. 1063127
    • (2001) Science , vol.293 , pp. 1074-1080
    • Jenuwein, T.1    Allis, C.D.2
  • 3
    • 77649246145 scopus 로고    scopus 로고
    • Histone modification levels are predictive for gene expression
    • PMID: 20133639
    • Karlić R, Chung HR, Lasserre J, Vlahovicek K, Vingron M. Histone modification levels are predictive for gene expression. Proc Natl Acad Sci U S A 2010; 107: 2926-31; PMID: 20133639; http://dx. doi. org/10. 1073/pnas. 0909344107
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 2926-2931
    • Karlić, R.1    Chung, H.R.2    Lasserre, J.3    Vlahovicek, K.4    Vingron, M.5
  • 4
    • 33747773708 scopus 로고    scopus 로고
    • Histone H3 acetylation and H3 K4 methylation define distinct chromatin regions permissive for transgene expression
    • PMID: 16914722
    • Yan C, Boyd DD. Histone H3 acetylation and H3 K4 methylation define distinct chromatin regions permissive for transgene expression. Mol Cell Biol 2006; 26: 6357-71; PMID: 16914722; http://dx. doi. org/10. 1128/MCB. 00311-06
    • (2006) Mol Cell Biol , vol.26 , pp. 6357-6371
    • Yan, C.1    Boyd, D.D.2
  • 5
    • 70149112313 scopus 로고    scopus 로고
    • Histone crosstalk between H3S10ph and H4K16ac generates a histone code that mediates transcription elongation
    • PMID: 19766566
    • Zippo A, Serafini R, Rocchigiani M, Pennacchini S, Krepelova A, Oliviero S. Histone crosstalk between H3S10ph and H4K16ac generates a histone code that mediates transcription elongation. Cell 2009; 138: 1122-36; PMID: 19766566; http://dx. doi. org/10. 1016/j. cell. 2009. 07. 031
    • (2009) Cell , vol.138 , pp. 1122-1136
    • Zippo, A.1    Serafini, R.2    Rocchigiani, M.3    Pennacchini, S.4    Krepelova, A.5    Oliviero, S.6
  • 6
    • 33646070846 scopus 로고    scopus 로고
    • A bivalent chromatin structure marks key developmental genes in embryonic stem cells
    • PMID: 16630819
    • Bernstein BE, Mikkelsen TS, Xie X, Kamal M, Huebert DJ, Cuff J, Fry B, Meissner A, Wernig M, Plath K, et al. A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell 2006; 125: 315-26; PMID: 16630819; http://dx. doi. org/10. 1016/j. cell. 2006. 02. 041
    • (2006) Cell , vol.125 , pp. 315-326
    • Bernstein, B.E.1    Mikkelsen, T.S.2    Xie, X.3    Kamal, M.4    Huebert, D.J.5    Cuff, J.6    Fry, B.7    Meissner, A.8    Wernig, M.9    Plath, K.10
  • 7
    • 17244368913 scopus 로고    scopus 로고
    • Genomic characterization reveals a simple histone H4 acetylation code
    • PMID: 15795371
    • Dion MF, Altschuler SJ, Wu LF, Rando OJ. Genomic characterization reveals a simple histone H4 acetylation code. Proc Natl Acad Sci U S A 2005; 102: 5501-6; PMID: 15795371; http://dx. doi. org/10. 1073/pnas. 0500136102
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 5501-5506
    • Dion, M.F.1    Altschuler, S.J.2    Wu, L.F.3    Rando, O.J.4
  • 8
    • 32444434989 scopus 로고    scopus 로고
    • Histone H4-K16 acetylation controls chromatin structure and protein interactions
    • PMID: 16469925
    • Shogren-Knaak M, Ishii H, Sun JM, Pazin MJ, Davie JR, Peterson CL. Histone H4-K16 acetylation controls chromatin structure and protein interactions. Science 2006; 311: 844-7; PMID: 16469925; http://dx. doi. org/10. 1126/science. 1124000
    • (2006) Science , vol.311 , pp. 844-847
    • Shogren-Knaak, M.1    Ishii, H.2    Sun, J.M.3    Pazin, M.J.4    Davie, J.R.5    Peterson, C.L.6
  • 9
    • 80054774747 scopus 로고    scopus 로고
    • Breaking the histone code with quantitative mass spectrometry
    • PMID: 21999833
    • Britton LM, Gonzales-Cope M, Zee BM, Garcia BA. Breaking the histone code with quantitative mass spectrometry. Expert Rev Proteomics 2011; 8: 631-43; PMID: 21999833; http://dx. doi. org/10. 1586/epr. 11. 47
    • (2011) Expert Rev Proteomics , vol.8 , pp. 631-643
    • Britton, L.M.1    Gonzales-Cope, M.2    Zee, B.M.3    Garcia, B.A.4
  • 10
    • 78650447665 scopus 로고    scopus 로고
    • Beta-N-acetylglucosamine (O-GlcNAc) is part of the histone code
    • PMID: 21045127
    • Sakabe K, Wang Z, Hart GW. Beta-N-acetylglucosamine (O-GlcNAc) is part of the histone code. Proc Natl Acad Sci U S A 2010; 107: 19915-20; PMID: 21045127; http://dx. doi. org/10. 1073/pnas. 1009023107
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 19915-19920
    • Sakabe, K.1    Wang, Z.2    Hart, G.W.3
  • 11
    • 80052942443 scopus 로고    scopus 로고
    • Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification
    • PMID: 21925322
    • Tan M, Luo H, Lee S, Jin F, Yang JS, Montellier E, Buchou T, Cheng Z, Rousseaux S, Rajagopal N, et al. Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification. Cell 2011; 146: 1016-28; PMID: 21925322; http://dx. doi. org/10. 1016/j. cell. 2011. 08. 008
    • (2011) Cell , vol.146 , pp. 1016-1028
    • Tan, M.1    Luo, H.2    Lee, S.3    Jin, F.4    Yang, J.S.5    Montellier, E.6    Buchou, T.7    Cheng, Z.8    Rousseaux, S.9    Rajagopal, N.10
  • 12
    • 34248640428 scopus 로고    scopus 로고
    • Lysine propionylation and butyrylation are novel post-translational modifications in histones
    • PMID: 17267393
    • Chen Y, Sprung R, Tang Y, Ball H, Sangras B, Kim SC, Falck JR, Peng J, Gu W, Zhao Y. Lysine propionylation and butyrylation are novel post-translational modifications in histones. Mol Cell Proteomics 2007; 6: 812-9; PMID: 17267393; http://dx. doi. org/10. 1074/mcp. M700021-MCP200
    • (2007) Mol Cell Proteomics , vol.6 , pp. 812-819
    • Chen, Y.1    Sprung, R.2    Tang, Y.3    Ball, H.4    Sangras, B.5    Kim, S.C.6    Falck, J.R.7    Peng, J.8    Gu, W.9    Zhao, Y.10
  • 13
    • 33846113751 scopus 로고    scopus 로고
    • N-formylation of lysine in histone proteins as a secondary modification arising from oxidative DNA damage
    • PMID: 17190813
    • Jiang T, Zhou X, Taghizadeh K, Dong M, Dedon PC. N-formylation of lysine in histone proteins as a secondary modification arising from oxidative DNA damage. Proc Natl Acad Sci U S A 2007; 104: 60-5; PMID: 17190813; http://dx. doi. org/10. 1073/pnas. 0606775103
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 60-65
    • Jiang, T.1    Zhou, X.2    Taghizadeh, K.3    Dong, M.4    Dedon, P.C.5
  • 14
    • 80052172007 scopus 로고    scopus 로고
    • Histone ADP-ribosylation in DNA repair, replication and transcription
    • PMID: 21741840
    • Messner S, Hottiger MO. Histone ADP-ribosylation in DNA repair, replication and transcription. Trends Cell Biol 2011; 21: 534-42; PMID: 21741840; http://dx. doi. org/10. 1016/j. tcb. 2011. 06. 001
    • (2011) Trends Cell Biol , vol.21 , pp. 534-542
    • Messner, S.1    Hottiger, M.O.2
  • 15
    • 84861163510 scopus 로고    scopus 로고
    • Lysine succinylation and lysine malonylation in histones
    • PMID: 22389435
    • Xie Z, Dai J, Dai L, Tan M, Cheng Z, Wu Y, Boeke JD, Zhao Y. Lysine succinylation and lysine malonylation in histones. Mol Cell Proteomics 2012; 11: 100-7; PMID: 22389435; http://dx. doi. org/10. 1074/mcp. M111. 015875
    • (2012) Mol Cell Proteomics , vol.11 , pp. 100-107
    • Xie, Z.1    Dai, J.2    Dai, L.3    Tan, M.4    Cheng, Z.5    Wu, Y.6    Boeke, J.D.7    Zhao, Y.8
  • 16
    • 33748163064 scopus 로고    scopus 로고
    • Proline isomerization of histone H3 regulates lysine methylation and gene expression
    • PMID: 16959570
    • Nelson CJ, Santos-Rosa H, Kouzarides T. Proline isomerization of histone H3 regulates lysine methylation and gene expression. Cell 2006; 126: 905-16; PMID: 16959570; http://dx. doi. org/10. 1016/j. cell. 2006. 07. 026
    • (2006) Cell , vol.126 , pp. 905-916
    • Nelson, C.J.1    Santos-Rosa, H.2    Kouzarides, T.3
  • 17
    • 33744457909 scopus 로고    scopus 로고
    • Yersinia YopJ acetylates and inhibits kinase activation by blocking phosphorylation
    • PMID: 16728640
    • Mukherjee S, Keitany G, Li Y, Wang Y, Ball HL, Goldsmith EJ, Orth K. Yersinia YopJ acetylates and inhibits kinase activation by blocking phosphorylation. Science 2006; 312: 1211-4; PMID: 16728640; http://dx. doi. org/10. 1126/science. 1126867
    • (2006) Science , vol.312 , pp. 1211-1214
    • Mukherjee, S.1    Keitany, G.2    Li, Y.3    Wang, Y.4    Ball, H.L.5    Goldsmith, E.J.6    Orth, K.7
  • 18
    • 82555170600 scopus 로고    scopus 로고
    • Bioinformatic analysis and post-translational modification crosstalk prediction of lysine acetylation
    • PMID: 22164248
    • Lu Z, Cheng Z, Zhao Y, Volchenboum SL. Bioinformatic analysis and post-translational modification crosstalk prediction of lysine acetylation. PLoS One 2011; 6: e28228; PMID: 22164248; http://dx. doi. org/10. 1371/journal. pone. 0028228
    • (2011) PLoS One , vol.6
    • Lu, Z.1    Cheng, Z.2    Zhao, Y.3    Volchenboum, S.L.4
  • 19
    • 77649123922 scopus 로고    scopus 로고
    • Unrestrictive identification of non-phosphorylation PTMs in yeast kinases by MS and PTMap
    • PMID: 20049863
    • Zhang K, Chen Y, Zhang Z, Tao S, Zhu H, Zhao Y. Unrestrictive identification of non-phosphorylation PTMs in yeast kinases by MS and PTMap. Proteomics 2010; 10: 896-903; PMID: 20049863
    • (2010) Proteomics , vol.10 , pp. 896-903
    • Zhang, K.1    Chen, Y.2    Zhang, Z.3    Tao, S.4    Zhu, H.5    Zhao, Y.6
  • 20
    • 0141613756 scopus 로고    scopus 로고
    • Phosphorylation of serine 10 in histone H3, what for?
    • PMID: 12917355
    • Prigent C, Dimitrov S. Phosphorylation of serine 10 in histone H3, what for? J Cell Sci 2003; 116: 3677-85; PMID: 12917355; http://dx. doi. org/10. 1242/jcs. 00735
    • (2003) J Cell Sci , vol.116 , pp. 3677-3685
    • Prigent, C.1    Dimitrov, S.2
  • 21
    • 0033515426 scopus 로고    scopus 로고
    • Phosphorylation of histone H3 is required for proper chromosome condensation and segregation
    • PMID: 10199406
    • Wei Y, Yu L, Bowen J, Gorovsky MA, Allis CD. Phosphorylation of histone H3 is required for proper chromosome condensation and segregation. Cell 1999; 97: 99-109; PMID: 10199406; http://dx. doi. org/10. 1016/S0092-8674(00)80718-7
    • (1999) Cell , vol.97 , pp. 99-109
    • Wei, Y.1    Yu, L.2    Bowen, J.3    Gorovsky, M.A.4    Allis, C.D.5
  • 23
    • 77951870981 scopus 로고    scopus 로고
    • A novel approach for untargeted post-translational modification identification using integer linear optimization and tandem mass spectrometry
    • PMID: 20103568
    • Baliban RC, DiMaggio PA, Plazas-Mayorca MD, Young NL, Garcia BA, Floudas CA. A novel approach for untargeted post-translational modification identification using integer linear optimization and tandem mass spectrometry. Mol Cell Proteomics 2010; 9: 764-79; PMID: 20103568; http://dx. doi. org/10. 1074/mcp. M900487-MCP200
    • (2010) Mol Cell Proteomics , vol.9 , pp. 764-779
    • Baliban, R.C.1    DiMaggio, P.A.2    Plazas-Mayorca, M.D.3    Young, N.L.4    Garcia, B.A.5    Floudas, C.A.6
  • 24
    • 73649107630 scopus 로고    scopus 로고
    • MS/MS/MS reveals false positive identification of histone serine methylation
    • PMID: 19877717
    • Zhang J, Chen Y, Zhang Z, Xing G, Wysocka J, Zhao Y. MS/MS/MS reveals false positive identification of histone serine methylation. J Proteome Res 2010; 9: 585-94; PMID: 19877717; http://dx. doi. org/10. 1021/pr900864s
    • (2010) J Proteome Res , vol.9 , pp. 585-594
    • Zhang, J.1    Chen, Y.2    Zhang, Z.3    Xing, G.4    Wysocka, J.5    Zhao, Y.6
  • 25
    • 65549106401 scopus 로고    scopus 로고
    • Methyl group migration during the fragmentation of singly charged ions of trimethyllysine-containing peptides: Precaution of using MS/MS of singly charged ions for interrogating peptide methylation
    • PMID: 19303795
    • Xiong L, Ping L, Yuan B, Wang Y. Methyl group migration during the fragmentation of singly charged ions of trimethyllysine-containing peptides: precaution of using MS/MS of singly charged ions for interrogating peptide methylation. J Am Soc Mass Spectrom 2009; 20: 1172-81; PMID: 19303795; http://dx. doi. org/10. 1016/j. jasms. 2009. 02. 014
    • (2009) J Am Soc Mass Spectrom , vol.20 , pp. 1172-1181
    • Xiong, L.1    Ping, L.2    Yuan, B.3    Wang, Y.4
  • 26
    • 55749104227 scopus 로고    scopus 로고
    • Induction of pluripotent stem cells from primary human fibroblasts with only Oct4 and Sox2
    • PMID: 18849973
    • Huangfu D, Osafune K, Maehr R, Guo W, Eijkelenboom A, Chen S, Muhlestein W, Melton DA. Induction of pluripotent stem cells from primary human fibroblasts with only Oct4 and Sox2. Nat Biotechnol 2008; 26: 1269-75; PMID: 18849973; http://dx. doi. org/10. 1038/nbt. 1502
    • (2008) Nat Biotechnol , vol.26 , pp. 1269-1275
    • Huangfu, D.1    Osafune, K.2    Maehr, R.3    Guo, W.4    Eijkelenboom, A.5    Chen, S.6    Muhlestein, W.7    Melton, D.A.8
  • 27
    • 84861665777 scopus 로고    scopus 로고
    • Identification of combinatorial patterns of posttranslational modifications on individual histones in the mouse brain
    • PMID: 22693562
    • Tweedie-Cullen RY, Brunner AM, Grossmann J, Mohanna S, Sichau D, Nanni P, Panse C, Mansuy IM. Identification of combinatorial patterns of posttranslational modifications on individual histones in the mouse brain. PLoS One 2012; 7: e36980; PMID: 22693562; http://dx. doi. org/10. 1371/journal. pone. 0036980
    • (2012) PLoS One , vol.7
    • Tweedie-Cullen, R.Y.1    Brunner, A.M.2    Grossmann, J.3    Mohanna, S.4    Sichau, D.5    Nanni, P.6    Panse, C.7    Mansuy, I.M.8
  • 28
    • 59949084113 scopus 로고    scopus 로고
    • Nonenzymatic biotinylation of histone H2A
    • PMID: 19160459
    • Healy S, Heightman TD, Hohmann L, Schriemer D, Gravel RA. Nonenzymatic biotinylation of histone H2A. Protein Sci 2009; 18: 314-28; PMID: 19160459; http://dx. doi. org/10. 1002/pro. 37
    • (2009) Protein Sci , vol.18 , pp. 314-328
    • Healy, S.1    Heightman, T.D.2    Hohmann, L.3    Schriemer, D.4    Gravel, R.A.5
  • 29
    • 11244311676 scopus 로고    scopus 로고
    • A nonenzymatic modification of the amino-terminal domain of histone H3 by bile acid acyl adenylate
    • PMID: 15465822
    • Mano N, Kasuga K, Kobayashi N, Goto J. A nonenzymatic modification of the amino-terminal domain of histone H3 by bile acid acyl adenylate. J Biol Chem 2004; 279: 55034-41; PMID: 15465822; http://dx. doi. org/10. 1074/jbc. M409205200
    • (2004) J Biol Chem , vol.279 , pp. 55034-55041
    • Mano, N.1    Kasuga, K.2    Kobayashi, N.3    Goto, J.4
  • 30
    • 77956389018 scopus 로고    scopus 로고
    • Evaluation of nonenzymatic posttranslational modification-derived products as biomarkers of molecular aging of proteins
    • PMID: 20562349
    • Jaisson S, Gillery P. Evaluation of nonenzymatic posttranslational modification-derived products as biomarkers of molecular aging of proteins. Clin Chem 2010; 56: 1401-12; PMID: 20562349; http://dx. doi. org/10. 1373/clinchem. 2010. 145201
    • (2010) Clin Chem , vol.56 , pp. 1401-1412
    • Jaisson, S.1    Gillery, P.2
  • 32
    • 73649107630 scopus 로고    scopus 로고
    • MS/MS/MS reveals false positive identification of histone serine methylation
    • PMID: 19877717
    • Zhang J, Chen Y, Zhang Z, Xing G, Wysocka J, Zhao Y. MS/MS/MS reveals false positive identification of histone serine methylation. J Proteome Res 2010; 9: 585-94; PMID: 19877717; http://dx. doi. org/10. 1021/pr900864s
    • (2010) J Proteome Res , vol.9 , pp. 585-594
    • Zhang, J.1    Chen, Y.2    Zhang, Z.3    Xing, G.4    Wysocka, J.5    Zhao, Y.6
  • 33
    • 41149159170 scopus 로고    scopus 로고
    • Complications in the assignment of 14 and 28 Da mass shift detected by mass spectrometry as in vivo methylation from endogenous proteins
    • PMID: 18247584
    • Jung SY, Li Y, Wang Y, Chen Y, Zhao Y, Qin J. Complications in the assignment of 14 and 28 Da mass shift detected by mass spectrometry as in vivo methylation from endogenous proteins. Anal Chem 2008; 80: 1721-9; PMID: 18247584; http://dx. doi. org/10. 1021/ac7021025
    • (2008) Anal Chem , vol.80 , pp. 1721-1729
    • Jung, S.Y.1    Li, Y.2    Wang, Y.3    Chen, Y.4    Zhao, Y.5    Qin, J.6
  • 34
    • 84864013839 scopus 로고    scopus 로고
    • Origins and formation of histone methylation across the human cell cycle
    • PMID: 22547680
    • Zee BM, Britton LM, Wolle D, Haberman DM, Garcia BA. Origins and formation of histone methylation across the human cell cycle. Mol Cell Biol 2012; 32: 2503-14; PMID: 22547680; http://dx. doi. org/10. 1128/MCB. 06673-11
    • (2012) Mol Cell Biol , vol.32 , pp. 2503-2514
    • Zee, B.M.1    Britton, L.M.2    Wolle, D.3    Haberman, D.M.4    Garcia, B.A.5
  • 35
    • 0032560517 scopus 로고    scopus 로고
    • Phosphorylation of histone H3 at serine 10 is correlated with chromosome condensation during mitosis and meiosis in Tetrahymena
    • PMID: 9636175
    • Wei Y, Mizzen CA, Cook RG, Gorovsky MA, Allis CD. Phosphorylation of histone H3 at serine 10 is correlated with chromosome condensation during mitosis and meiosis in Tetrahymena. Proc Natl Acad Sci U S A 1998; 95: 7480-4; PMID: 9636175; http://dx. doi. org/10. 1073/pnas. 95. 13. 7480
    • (1998) Proc Natl Acad Sci U S A , vol.95 , pp. 7480-7484
    • Wei, Y.1    Mizzen, C.A.2    Cook, R.G.3    Gorovsky, M.A.4    Allis, C.D.5
  • 37
    • 77957731584 scopus 로고    scopus 로고
    • Two histone marks establish the inner centromere and chromosome bi-orientation
    • PMID: 20929775
    • Yamagishi Y, Honda T, Tanno Y, Watanabe Y. Two histone marks establish the inner centromere and chromosome bi-orientation. Science 2010; 330: 239-43; PMID: 20929775; http://dx. doi. org/10. 1126/science. 1194498
    • (2010) Science , vol.330 , pp. 239-243
    • Yamagishi, Y.1    Honda, T.2    Tanno, Y.3    Watanabe, Y.4
  • 38
    • 0033638105 scopus 로고    scopus 로고
    • Phosphorylation of serine 10 in histone H3 is functionally linked in vitro and in vivo to Gcn5-mediated acetylation at lysine 14
    • PMID: 10911986
    • Lo WS, Trievel RC, Rojas JR, Duggan L, Hsu JY, Allis CD, Marmorstein R, Berger SL. Phosphorylation of serine 10 in histone H3 is functionally linked in vitro and in vivo to Gcn5-mediated acetylation at lysine 14. Mol Cell 2000; 5: 917-26; PMID: 10911986; http://dx. doi. org/10. 1016/S1097-2765(00)80257-9
    • (2000) Mol Cell , vol.5 , pp. 917-926
    • Lo, W.S.1    Trievel, R.C.2    Rojas, J.R.3    Duggan, L.4    Hsu, J.Y.5    Allis, C.D.6    Marmorstein, R.7    Berger, S.L.8
  • 39
    • 40749094094 scopus 로고    scopus 로고
    • Histone H3 tails containing dimethylated lysine and adjacent phosphorylated serine modifications adopt a specific conformation during mitosis and meiosis
    • PMID: 18180282
    • Eberlin A, Grauffel C, Oulad-Abdelghani M, Robert F, Torres-Padilla ME, Lambrot R, Spehner D, Ponce-Perez L, Würtz JM, Stote RH, et al. Histone H3 tails containing dimethylated lysine and adjacent phosphorylated serine modifications adopt a specific conformation during mitosis and meiosis. Mol Cell Biol 2008; 28: 1739-54; PMID: 18180282; http://dx. doi. org/10. 1128/MCB. 01180-07
    • (2008) Mol Cell Biol , vol.28 , pp. 1739-1754
    • Eberlin, A.1    Grauffel, C.2    Oulad-Abdelghani, M.3    Robert, F.4    Torres-Padilla, M.E.5    Lambrot, R.6    Spehner, D.7    Ponce-Perez, L.8    Würtz, J.M.9    Stote, R.H.10
  • 40
    • 78649698079 scopus 로고    scopus 로고
    • Global turnover of histone post-translational modifications and variants in human cells
    • PMID: 21134274
    • Zee BM, Levin RS, Dimaggio PA, Garcia BA. Global turnover of histone post-translational modifications and variants in human cells. Epigenetics Chromatin 2010; 3: 22; PMID: 21134274; http://dx. doi. org/10. 1186/1756-8935-3-22
    • (2010) Epigenetics Chromatin , vol.3 , pp. 22
    • Zee, B.M.1    Levin, R.S.2    Dimaggio, P.A.3    Garcia, B.A.4
  • 41
    • 33745713133 scopus 로고    scopus 로고
    • Regulation of chromatin structure by histone H3S10 phosphorylation
    • PMID: 16821135
    • Johansen KM, Johansen J. Regulation of chromatin structure by histone H3S10 phosphorylation. Chromosome Res 2006; 14: 393-404; PMID: 16821135; http://dx. doi. org/10. 1007/s10577-006-1063-4
    • (2006) Chromosome Res , vol.14 , pp. 393-404
    • Johansen, K.M.1    Johansen, J.2
  • 42
    • 84864518388 scopus 로고    scopus 로고
    • Serine/threonine acetylation of TGFβ-activated kinase (TAK1) by Yersinia pestis YopJ inhibits innate immune signaling
    • PMID: 22802624
    • Paquette N, Conlon J, Sweet C, Rus F, Wilson L, Pereira A, Rosadini CV, Goutagny N, Weber AN, Lane WS, et al. Serine/threonine acetylation of TGFβ-activated kinase (TAK1) by Yersinia pestis YopJ inhibits innate immune signaling. Proc Natl Acad Sci U S A 2012; 109: 12710-5; PMID: 22802624; http://dx. doi. org/10. 1073/pnas. 1008203109
    • (2012) Proc Natl Acad Sci U S A , vol.109 , pp. 12710-12715
    • Paquette, N.1    Conlon, J.2    Sweet, C.3    Rus, F.4    Wilson, L.5    Pereira, A.6    Rosadini, C.V.7    Goutagny, N.8    Weber, A.N.9    Lane, W.S.10
  • 43
    • 70349235389 scopus 로고    scopus 로고
    • Dynamic changes in chromatin structure through post-translational modifications of histone H3 during replication origin activation
    • PMID: 19585526
    • Rampakakis E, Di Paola D, Chan MK, Zannis-Hadjopoulos M. Dynamic changes in chromatin structure through post-translational modifications of histone H3 during replication origin activation. J Cell Biochem 2009; 108: 400-7; PMID: 19585526; http://dx. doi. org/10. 1002/jcb. 22266
    • (2009) J Cell Biochem , vol.108 , pp. 400-407
    • Rampakakis, E.1    Di Paola, D.2    Chan, M.K.3    Zannis-Hadjopoulos, M.4
  • 45
    • 13744261272 scopus 로고    scopus 로고
    • The histone deacetylase inhibitor trichostatin A alters the pattern of DNA replication origin activity in human cells
    • PMID: 15653633
    • Kemp MG, Ghosh M, Liu G, Leffak M. The histone deacetylase inhibitor trichostatin A alters the pattern of DNA replication origin activity in human cells. Nucleic Acids Res 2005; 33: 325-36; PMID: 15653633; http://dx. doi. org/10. 1093/nar/gki177
    • (2005) Nucleic Acids Res , vol.33 , pp. 325-336
    • Kemp, M.G.1    Ghosh, M.2    Liu, G.3    Leffak, M.4
  • 46
    • 2442660397 scopus 로고    scopus 로고
    • The Rpd3-Sin3 histone deacetylase regulates replication timing and enables intra-S origin control in Saccharomyces cerevisiae
    • PMID: 15143171
    • Aparicio JG, Viggiani CJ, Gibson DG, Aparicio OM. The Rpd3-Sin3 histone deacetylase regulates replication timing and enables intra-S origin control in Saccharomyces cerevisiae. Mol Cell Biol 2004; 24: 4769-80; PMID: 15143171; http://dx. doi. org/10. 1128/MCB. 24. 11. 4769-4780. 2004
    • (2004) Mol Cell Biol , vol.24 , pp. 4769-4780
    • Aparicio, J.G.1    Viggiani, C.J.2    Gibson, D.G.3    Aparicio, O.M.4
  • 49
    • 0016591581 scopus 로고
    • Isolation of micro-and macronuclei of Tetrahymena pyriformis
    • PMID: 805898
    • Gorovsky MA, Yao MC, Keevert JB, Pleger GL. Isolation of micro-and macronuclei of Tetrahymena pyriformis. Methods Cell Biol 1975; 9: 311-27; PMID: 805898; http://dx. doi. org/10. 1016/S0091-679X(08)60080-1
    • (1975) Methods Cell Biol , vol.9 , pp. 311-327
    • Gorovsky, M.A.1    Yao, M.C.2    Keevert, J.B.3    Pleger, G.L.4
  • 50
    • 0020196312 scopus 로고
    • Identification and purification of young macronuclear anlagen from conjugating cells of Tetrahymena thermophila
    • PMID: 7141113
    • Allis CD, Dennison DK. Identification and purification of young macronuclear anlagen from conjugating cells of Tetrahymena thermophila. Dev Biol 1982; 93: 519-33; PMID: 7141113; http://dx. doi. org/10. 1016/0012-1606(82)90139-7
    • (1982) Dev Biol , vol.93 , pp. 519-533
    • Allis, C.D.1    Dennison, D.K.2
  • 52
    • 33646472914 scopus 로고    scopus 로고
    • Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis
    • PMID: 16627621
    • Recht J, Tsubota T, Tanny JC, Diaz RL, Berger JM, Zhang X, Garcia BA, Shabanowitz J, Burlingame AL, Hunt DF, et al. Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis. Proc Natl Acad Sci U S A 2006; 103: 6988-93; PMID: 16627621; http://dx. doi. org/10. 1073/pnas. 0601676103
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 6988-6993
    • Recht, J.1    Tsubota, T.2    Tanny, J.C.3    Diaz, R.L.4    Berger, J.M.5    Zhang, X.6    Garcia, B.A.7    Shabanowitz, J.8    Burlingame, A.L.9    Hunt, D.F.10
  • 53
    • 79251551440 scopus 로고    scopus 로고
    • Identification of lysine 37 of histone H2B as a novel site of methylation
    • PMID: 21249157
    • Gardner KE, Zhou L, Parra MA, Chen X, Strahl BD. Identification of lysine 37 of histone H2B as a novel site of methylation. PLoS One 2011; 6: e16244; PMID: 21249157; http://dx. doi. org/10. 1371/journal. pone. 0016244
    • (2011) PLoS One , vol.6
    • Gardner, K.E.1    Zhou, L.2    Parra, M.A.3    Chen, X.4    Strahl, B.D.5
  • 54
    • 33747195353 scopus 로고    scopus 로고
    • Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors
    • PMID: 16904174
    • Takahashi K, Yamanaka S. Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell 2006; 126: 663-76; PMID: 16904174; http://dx. doi. org/10. 1016/j. cell. 2006. 07. 024
    • (2006) Cell , vol.126 , pp. 663-676
    • Takahashi, K.1    Yamanaka, S.2
  • 56
    • 58249085824 scopus 로고    scopus 로고
    • Role of the murine reprogramming factors in the induction of pluripotency
    • PMID: 19167336
    • Sridharan R, Tchieu J, Mason MJ, Yachechko R, Kuoy E, Horvath S, Zhou Q, Plath K. Role of the murine reprogramming factors in the induction of pluripotency. Cell 2009; 136: 364-77; PMID: 19167336; http://dx. doi. org/10. 1016/j. cell. 2009. 01. 001
    • (2009) Cell , vol.136 , pp. 364-377
    • Sridharan, R.1    Tchieu, J.2    Mason, M.J.3    Yachechko, R.4    Kuoy, E.5    Horvath, S.6    Zhou, Q.7    Plath, K.8
  • 57
    • 54949105021 scopus 로고    scopus 로고
    • Promotion of reprogramming to ground state pluripotency by signal inhibition
    • PMID: 18942890
    • Silva J, Barrandon O, Nichols J, Kawaguchi J, Theunissen TW, Smith A. Promotion of reprogramming to ground state pluripotency by signal inhibition. PLoS Biol 2008; 6: e253; PMID: 18942890; http://dx. doi. org/10. 1371/journal. pbio. 0060253
    • (2008) PLoS Biol , vol.6
    • Silva, J.1    Barrandon, O.2    Nichols, J.3    Kawaguchi, J.4    Theunissen, T.W.5    Smith, A.6
  • 59
    • 73349095689 scopus 로고    scopus 로고
    • Smarcc1/Baf155 couples self-renewal gene repression with changes in chromatin structure in mouse embryonic stem cells
    • PMID: 19785031
    • Schaniel C, Ang YS, Ratnakumar K, Cormier C, James T, Bernstein E, Lemischka IR, Paddison PJ. Smarcc1/Baf155 couples self-renewal gene repression with changes in chromatin structure in mouse embryonic stem cells. Stem Cells 2009; 27: 2979-91; PMID: 19785031
    • (2009) Stem Cells , vol.27 , pp. 2979-2991
    • Schaniel, C.1    Ang, Y.S.2    Ratnakumar, K.3    Cormier, C.4    James, T.5    Bernstein, E.6    Lemischka, I.R.7    Paddison, P.J.8
  • 60
    • 39149115929 scopus 로고    scopus 로고
    • Defining molecular cornerstones during fibroblast to iPS cell reprogramming in mouse
    • PMID: 18371448
    • Stadtfeld M, Maherali N, Breault DT, Hochedlinger K. Defining molecular cornerstones during fibroblast to iPS cell reprogramming in mouse. Cell Stem Cell 2008; 2: 230-40; PMID: 18371448; http://dx. doi. org/10. 1016/j. stem. 2008. 02. 001
    • (2008) Cell Stem Cell , vol.2 , pp. 230-240
    • Stadtfeld, M.1    Maherali, N.2    Breault, D.T.3    Hochedlinger, K.4
  • 61
    • 77449086407 scopus 로고    scopus 로고
    • In vivo residue-specific histone methylation dynamics
    • PMID: 19940157
    • Zee BM, Levin RS, Xu B, LeRoy G, Wingreen NS, Garcia BA. In vivo residue-specific histone methylation dynamics. J Biol Chem 2010; 285: 3341-50; PMID: 19940157; http://dx. doi. org/10. 1074/jbc. M109. 063784
    • (2010) J Biol Chem , vol.285 , pp. 3341-3350
    • Zee, B.M.1    Levin, R.S.2    Xu, B.3    LeRoy, G.4    Wingreen, N.S.5    Garcia, B.A.6
  • 63
    • 84866084892 scopus 로고    scopus 로고
    • PILOT_PROTEIN: Identification of unmodified and modified proteins via high-resolution mass spectrometry and mixed-integer linear optimization
    • PMID: 22788846
    • Baliban RC, Dimaggio PA, Plazas-Mayorca MD, Garcia BA, Floudas CA. PILOT_PROTEIN: identification of unmodified and modified proteins via high-resolution mass spectrometry and mixed-integer linear optimization. J Proteome Res 2012; 11: 4615-29; PMID: 22788846; http://dx. doi. org/10. 1021/pr300418j
    • (2012) J Proteome Res , vol.11 , pp. 4615-4629
    • Baliban, R.C.1    Dimaggio, P.A.2    Plazas-Mayorca, M.D.3    Garcia, B.A.4    Floudas, C.A.5
  • 64
    • 2942568222 scopus 로고    scopus 로고
    • Unimod: Protein modifications for mass spectrometry
    • PMID: 15174123
    • Creasy DM, Cottrell JS. Unimod: Protein modifications for mass spectrometry. Proteomics 2004; 4: 1534-6; PMID: 15174123; http://dx. doi. org/10. 1002/pmic. 200300744
    • (2004) Proteomics , vol.4 , pp. 1534-1536
    • Creasy, D.M.1    Cottrell, J.S.2
  • 65
    • 2942564448 scopus 로고    scopus 로고
    • The RESID Database of Protein Modifications as a resource and annotation tool
    • PMID: 15174122
    • Garavelli JS. The RESID Database of Protein Modifications as a resource and annotation tool. Proteomics 2004; 4: 1527-33; PMID: 15174122; http://dx. doi. org/10. 1002/pmic. 200300777
    • (2004) Proteomics , vol.4 , pp. 1527-1533
    • Garavelli, J.S.1
  • 66
    • 35848970747 scopus 로고    scopus 로고
    • Mapping protein post-translational modifications with mass spectrometry
    • PMID: 17901869
    • Witze ES, Old WM, Resing KA, Ahn NG. Mapping protein post-translational modifications with mass spectrometry. Nat Methods 2007; 4: 798-806; PMID: 17901869; http://dx. doi. org/10. 1038/nmeth1100
    • (2007) Nat Methods , vol.4 , pp. 798-806
    • Witze, E.S.1    Old, W.M.2    Resing, K.A.3    Ahn, N.G.4
  • 67
    • 20844457100 scopus 로고    scopus 로고
    • Integrated approach for manual evaluation of peptides identified by searching protein sequence databases with tandem mass spectra
    • PMID: 15952748
    • Chen Y, Kwon SW, Kim SC, Zhao Y. Integrated approach for manual evaluation of peptides identified by searching protein sequence databases with tandem mass spectra. J Proteome Res 2005; 4: 998-1005; PMID: 15952748; http://dx. doi. org/10. 1021/pr049754t
    • (2005) J Proteome Res , vol.4 , pp. 998-1005
    • Chen, Y.1    Kwon, S.W.2    Kim, S.C.3    Zhao, Y.4
  • 68
    • 84864923697 scopus 로고    scopus 로고
    • Proteogenomic characterization and mapping of nucleosomes decoded by Brd and HP1 proteins
    • PMID: 22897906
    • Leroy G, Chepelev I, Dimaggio PA, Blanco MA, Zee BM, Zhao K, Garcia BA. Proteogenomic characterization and mapping of nucleosomes decoded by Brd and HP1 proteins. Genome Biol 2012; 13: R68; PMID: 22897906; http://dx. doi. org/10. 1186/gb-2012-13-8-r68
    • (2012) Genome Biol , vol.13
    • Leroy, G.1    Chepelev, I.2    Dimaggio, P.A.3    Blanco, M.A.4    Zee, B.M.5    Zhao, K.6    Garcia, B.A.7
  • 69
    • 84985000483 scopus 로고    scopus 로고
    • Affi-Gel 10 Activated Immunoaffinity Supports. Hercules, CA
    • Laboratories B-R. Instruction Manual. Affi-Gel 10 Activated Immunoaffinity Supports. Hercules, CA, 2012.
    • (2012) Instruction Manual
    • Laboratories, B.-R.1


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