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Volumn 9781461451280, Issue , 2013, Pages 47-60

The discretizable molecular distance geometry problem seems easier on proteins

Author keywords

Branch and Prune; Distance geometry; Fixed parameter tractable; Protein conformation; Symmetry

Indexed keywords

GEOMETRY; INTEGER PROGRAMMING; NUCLEAR MAGNETIC RESONANCE;

EID: 84884931980     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-1-4614-5128-0_3     Document Type: Chapter
Times cited : (23)

References (21)
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  • 4
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    • Dong, Q., Wu, Z.: A geometric build-up algorithm for solving the molecular distance geometry problem with sparse distance data. J. Global Optim. 26, 321-333 (2003)
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    • Dong, Q.1    Wu, Z.2
  • 8
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    • Recent advances on the discretizable molecular distance geometry problem
    • Lavor, C., Liberti, L., Maculan, N., Mucherino, A.: Recent advances on the discretizable molecular distance geometry problem. Eur. J. Oper. Res. 219, 698-706 (2012)
    • (2012) Eur. J. Oper. Res. , vol.219 , pp. 698-706
    • Lavor, C.1    Liberti, L.2    MacUlan, N.3    Mucherino, A.4
  • 11
    • 79955868839 scopus 로고    scopus 로고
    • On the computation of protein backbones by using artificial backbones of hydrogens
    • Lavor, C., Mucherino, A., Liberti, L., Maculan, N.: On the computation of protein backbones by using artificial backbones of hydrogens. J. Global Optim. 50, 329-344 (2011)
    • (2011) J. Global Optim. , vol.50 , pp. 329-344
    • Lavor, C.1    Mucherino, A.2    Liberti, L.3    MacUlan, N.4
  • 12
    • 85193183483 scopus 로고    scopus 로고
    • On a relationship between graph realizability and distance matrix completion
    • Kostoglou, V., Arabatzis, G., Karamitopoulos, L. (eds.) Hellenic OR Society, Thessaloniki
    • Liberti, L., Lavor, C.: On a relationship between graph realizability and distance matrix completion. In: Kostoglou, V., Arabatzis, G., Karamitopoulos, L. (eds.) Proceedings of BALCOR, vol. I, pp. 2-9. Hellenic OR Society, Thessaloniki (2011)
    • (2011) Proceedings of BALCOR , vol.1 , pp. 2-9
    • Liberti, L.1    Lavor, C.2
  • 13
    • 68949155001 scopus 로고    scopus 로고
    • A branch-and-prune algorithm for the molecular distance geometry problem
    • Liberti, L., Lavor, C., Maculan, N.: A branch-and-prune algorithm for the molecular distance geometry problem. Int. Trans. Oper. Res. 15, 1-17 (2008)
    • (2008) Int. Trans. Oper. Res. , vol.15 , pp. 1-17
    • Liberti, L.1    Lavor, C.2    MacUlan, N.3
  • 14
    • 84863430641 scopus 로고    scopus 로고
    • Molecular distance geometry methods: From continuous to discrete
    • Liberti, L., Lavor, C., Mucherino, A., Maculan, N.: Molecular distance geometry methods: from continuous to discrete. Int. Trans. Oper. Res. 18, 33-51 (2010)
    • (2010) Int. Trans. Oper. Res. , vol.18 , pp. 33-51
    • Liberti, L.1    Lavor, C.2    Mucherino, A.3    MacUlan, N.4
  • 17
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    • Global continuation for distance geometry problems
    • Moré, J., Wu, Z.: Global continuation for distance geometry problems. SIAM J. Optim. 7(3), 814-846 (1997)
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  • 18
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    • The discretizable distance geometry problem
    • to appear
    • Mucherino, A., Lavor, C., Liberti, L.: The discretizable distance geometry problem, to appear in Optimization Letters (DOI:10.1007/s11590-011-0358-3).
    • Optimization Letters
    • Mucherino, A.1    Lavor, C.2    Liberti, L.3
  • 19
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    • MD-jeep: An implementation of a branch and prune algorithm for distance geometry problems, Lectures Notes in Computer Science
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    • Mucherino, A., Liberti, L., Lavor, C.: MD-jeep: an implementation of a branch and prune algorithm for distance geometry problems, Lectures Notes in Computer Science. In: Fukuda, K., et al. (eds.) Proceedings of the Third International Congress on Mathematical Software (ICMS10), Kobe, Japan, vol. 6327, pp. 186-197 (2010)
    • (2010) Proceedings of the Third International Congress on Mathematical Software (ICMS10) , vol.6327 , pp. 186-197
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.