SCOPUS 정보 검색 플랫폼

Volumn 163, Issue , 2013, Pages 321-340

Excited state dynamics of Photoactive Yellow Protein chromophores elucidated by high-resolution spectroscopy and ab initio calculations

(4) Tan, Eric M M a Amirjalayer, Saeed a Bakker, Bert H a Buma, Wybren J a

a UNIVERSITY OF AMSTERDAM (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

4-COUMARIC ACID; CHROMOGENIC SUBSTRATE; CINNAMIC ACID DERIVATIVE; COUMARIC ACID; METHYL P COUMARATE; METHYL-P-COUMARATE; PARA COUMARIC ACID;

ARTICLE; CHEMISTRY; MOLECULAR DYNAMICS; SPECTROSCOPY;

CHROMOGENIC COMPOUNDS; CINNAMATES; COUMARIC ACIDS; MOLECULAR DYNAMICS SIMULATION; SPECTRUM ANALYSIS;

EID: 84884864108 PISSN: 13596640 EISSN: 13645498 Source Type: Journal
DOI: 10.1039/c2fd20139a Document Type: Article

Times cited : (31)

References (52)

1
- 1642453927
- M. A. Van der Horst K. J. Hellingwerf Acc. Chem. Res. 2004 37 13
- (2004) Acc. Chem. Res. , vol.37 , pp. 13
- Van Der Horst, M.A.¹ Hellingwerf, K.J.²

2
- 0022430790
- T. E. Meyer Biochim. Biophys. Acta 1985 806 175
- (1985) Biochim. Biophys. Acta , vol.806 , pp. 175
- Meyer, T.E.¹

3
- 0023152468
- T. E. Meyer E. Yakali M. A. Cusanovich G. Tollin Biochemistry 1987 26 418
- (1987) Biochemistry , vol.26 , pp. 418
- Meyer, T.E.¹ Yakali, E.² Cusanovich, M.A.³ Tollin, G.⁴

4
- 0025268907
- T. E. Meyer J. C. Fitch R. G. Bartsch G. Tollin M. A. Cusanovich Biochim. Biophys. Acta 1990 1016 364
- (1990) Biochim. Biophys. Acta , vol.1016 , pp. 364
- Meyer, T.E.¹ Fitch, J.C.² Bartsch, R.G.³ Tollin, G.⁴ Cusanovich, M.A.⁵

5
- 0027324441
- W. W. Sprenger W. D. Hoff J. P. Armitage K. J. Hellingwerf J. Bacteriol. 1993 175 3096
- (1993) J. Bacteriol. , vol.175 , pp. 3096
- Sprenger, W.W.¹ Hoff, W.D.² Armitage, J.P.³ Hellingwerf, K.J.⁴

6
- 0037468225
- K. J. Hellingwerf J. Hendriks T. Gensch J. Phys. Chem. A 2003 107 1082
- (2003) J. Phys. Chem. A , vol.107 , pp. 1082
- Hellingwerf, K.J.¹ Hendriks, J.² Gensch, T.³

7
- 0042825748
- M. L. Groot L. J. G. W. van Wilderen D. S. Larsen M. A. van der Horst I. H. M. van Stokkum K. J. Hellingwerf R. van Grondelle Biochemistry 2003 42 10054
- (2003) Biochemistry , vol.42 , pp. 10054
- Groot, M.L.¹ Van Wilderen, L.J.G.W.² Larsen, D.S.³ Van Der Horst, M.A.⁴ Van Stokkum, I.H.M.⁵ Hellingwerf, K.J.⁶ Van Grondelle, R.⁷

8
- 1842502916
- G. Groenhof M. Bouxin-Cademartory B. Hess S. P. de Visser H. J. C. Berendsen M. Olivucci A. E. Mark M. A. Robb J. Am. Chem. Soc. 2004 126 4228
- (2004) J. Am. Chem. Soc. , vol.126 , pp. 4228
- Groenhof, G.¹ Bouxin-Cademartory, M.² Hess, B.³ De Visser, S.P.⁴ Berendsen, H.J.C.⁵ Olivucci, M.⁶ Mark, A.E.⁷ Robb, M.A.⁸

9
- 4644235986
- N. Mataga H. Chosrowjan S. Taniguchi J. Photochem. Photobiol., C 2004 5 155
- (2004) J. Photochem. Photobiol., C , vol.5 , pp. 155
- Mataga, N.¹ Chosrowjan, H.² Taniguchi, S.³

10
- 84869756006
- F. Schotte H. S. Cho V. R. I. Kaila H. Kamikubo N. Dashdorj E. R. Henry T. J. Graber R. Henning M. Wulff G. Hummer M. Kataoka P. A. Anfinrud Proc. Natl. Acad. Sci. U. S. A. 2012 109 19256
- (2012) Proc. Natl. Acad. Sci. U. S. A. , vol.109 , pp. 19256
- Schotte, F.¹ Cho, H.S.² Kaila, V.R.I.³ Kamikubo, H.⁴ Dashdorj, N.⁵ Henry, E.R.⁶ Graber, T.J.⁷ Henning, R.⁸ Wulff, M.⁹ Hummer, G.¹⁰ Kataoka, M.¹¹ Anfinrud, P.A.¹²

11
- 0037140791
- W. L. Ryan D. J. Gordon D. H. Levy J. Am. Chem. Soc. 2002 124 6194
- (2002) J. Am. Chem. Soc. , vol.124 , pp. 6194
- Ryan, W.L.¹ Gordon, D.J.² Levy, D.H.³

12
- 22944484066
- M. de Groot W. J. Buma J. Phys. Chem. A 2005 109 6135
- (2005) J. Phys. Chem. A , vol.109 , pp. 6135
- De Groot, M.¹ Buma, W.J.²

13
- 79952855928
- S. Smolarek A. Vdovin E. M. M. Tan W. J. Buma J. Phys. Chem. B 2011 115 1275
- (2011) J. Phys. Chem. B , vol.115 , pp. 1275
- Smolarek, S.¹ Vdovin, A.² Tan, E.M.M.³ Buma, W.J.⁴

14
- 77953048089
- S. Smolarek A. Vdovin D. L. Perrier J. P. Smit M. Drabbels W. J. Buma J. Am. Chem. Soc. 2010 132 6315
- (2010) J. Am. Chem. Soc. , vol.132 , pp. 6315
- Smolarek, S.¹ Vdovin, A.² Perrier, D.L.³ Smit, J.P.⁴ Drabbels, M.⁵ Buma, W.J.⁶

15
- 20344369297
- E. V. Gromov I. Burghardt H. Köppel L. S. Cederbaum J. Phys. Chem. A 2005 109 4623
- (2005) J. Phys. Chem. A , vol.109 , pp. 4623
- Gromov, E.V.¹ Burghardt, I.² Köppel, H.³ Cederbaum, L.S.⁴

16
- 17044388969
- Q.-S. Li W.-H. Fang Chem. Phys. 2005 313 71
- (2005) Chem. Phys. , vol.313 , pp. 71
- Li, Q.-S.¹ Fang, W.-H.²

17
- 80051615426
- R. Send V. R. I. Kaila D. Sunholm J. Chem. Theory Comput. 2011 7 2473
- (2011) J. Chem. Theory Comput. , vol.7 , pp. 2473
- Send, R.¹ Kaila, V.R.I.² Sunholm, D.³

18
- 34249806304
- E. V. Gromov I. Burghardt H. Köppel L. S. Cederbaum J. Am. Chem. Soc. 2007 129 6798
- (2007) J. Am. Chem. Soc. , vol.129 , pp. 6798
- Gromov, E.V.¹ Burghardt, I.² Köppel, H.³ Cederbaum, L.S.⁴

19
- 34447630077
- E. V. Gromov I. Burghardt J. T. Hynes H. Köppel L. S. Cederbaum J. Photochem. Photobiol., A 2007 190 241
- (2007) J. Photochem. Photobiol., A , vol.190 , pp. 241
- Gromov, E.V.¹ Burghardt, I.² Hynes, J.T.³ Köppel, H.⁴ Cederbaum, L.S.⁵

20
- 77956259339
- Y. Wang H. Li J. Chem. Phys. 2010 133 034108
- (2010) J. Chem. Phys. , vol.133 , pp. 034108
- Wang, Y.¹ Li, H.²

21
- 79551628234
- D. Zuev K. B. Bravaya T. D. Crawford R. Lindh A. I. Krylov J. Chem. Phys. 2011 134 034310
- (2011) J. Chem. Phys. , vol.134 , pp. 034310
- Zuev, D.¹ Bravaya, K.B.² Crawford, T.D.³ Lindh, R.⁴ Krylov, A.I.⁵

22
- 80051866848
- E. V. Gromov I. Burghardt H. Köppel L. S. Cederbaum J. Phys. Chem. A 2011 115 9237
- (2011) J. Phys. Chem. A , vol.115 , pp. 9237
- Gromov, E.V.¹ Burghardt, I.² Köppel, H.³ Cederbaum, L.S.⁴

23
- 81855180820
- D. Zuev K. B. Bravaya M. V. Makarova A. I. Krylov J. Chem. Phys. 2011 135 194304
- (2011) J. Chem. Phys. , vol.135 , pp. 194304
- Zuev, D.¹ Bravaya, K.B.² Makarova, M.V.³ Krylov, A.I.⁴

24
- 31044439156
- I.-R. Lee W. Lee A. H. Zewail Proc. Natl. Acad. Sci. U. S. A. 2006 103 258
- (2006) Proc. Natl. Acad. Sci. U. S. A. , vol.103 , pp. 258
- Lee, I.-R.¹ Lee, W.² Zewail, A.H.³

25
- 68949217048
- T. Rocha-Rinza O. Christiansen J. Rajput A. Gopalan D. B. Rahbek L. H. Andersen A. V. Bochenkova A. A. Granovsky K. B. Bravaya A. V. Nemukhin K. L. Christiansen M. B. Nielsen J. Phys. Chem. A 2009 113 9442
- (2009) J. Phys. Chem. A , vol.113 , pp. 9442
- Rocha-Rinza, T.¹ Christiansen, O.² Rajput, J.³ Gopalan, A.⁴ Rahbek, D.B.⁵ Andersen, L.H.⁶ Bochenkova, A.V.⁷ Granovsky, A.A.⁸ Bravaya, K.B.⁹ Nemukhin, A.V.¹⁰ Christiansen, K.L.¹¹ Nielsen, M.B.¹²

26
- 84865066274
- M. Almasian J. Grzetic J. van Maurik J. D. Steill G. Berden S. Ingemann W. J. Buma J. Oomens J. Phys. Chem. Lett. 2012 3 2259
- (2012) J. Phys. Chem. Lett. , vol.3 , pp. 2259
- Almasian, M.¹ Grzetic, J.² Van Maurik, J.³ Steill, J.D.⁴ Berden, G.⁵ Ingemann, S.⁶ Buma, W.J.⁷ Oomens, J.⁸

27
- 46449096454
- M. de Groot E. V. Gromov H. Köppel W. J. Buma J. Phys. Chem. B 2008 112 4427
- (2008) J. Phys. Chem. B , vol.112 , pp. 4427
- De Groot, M.¹ Gromov, E.V.² Köppel, H.³ Buma, W.J.⁴

28
- 79951919016
- S. Smolarek A. Vdovin E. M. M. Tan M. de Groot W. J. Buma Phys. Chem. Chem. Phys. 2011 13 4393
- (2011) Phys. Chem. Chem. Phys. , vol.13 , pp. 4393
- Smolarek, S.¹ Vdovin, A.² Tan, E.M.M.³ De Groot, M.⁴ Buma, W.J.⁵

29
- 84862286137
- D. Shimada R. Kusaka Y. Inokuchi M. Ehara T. Ebata Phys. Chem. Chem. Phys. 2012 14 8999
- (2012) Phys. Chem. Chem. Phys. , vol.14 , pp. 8999
- Shimada, D.¹ Kusaka, R.² Inokuchi, Y.³ Ehara, M.⁴ Ebata, T.⁵

30
- 15544381525
- M. Vengris D. S. Larsen M. A. van der Horst O. F. A. Larsen K. J. Hellingwerf R. van Grondelle J. Phys. Chem. B 2005 109 4197
- (2005) J. Phys. Chem. B , vol.109 , pp. 4197
- Vengris, M.¹ Larsen, D.S.² Van Der Horst, M.A.³ Larsen, O.F.A.⁴ Hellingwerf, K.J.⁵ Van Grondelle, R.⁶

31
- 33748194569
- A. Espagne D. H. Paik P. C. Barret M. M. Martin A. H. Zewail ChemPhysChem 2006 7 1717
- (2006) ChemPhysChem , vol.7 , pp. 1717
- Espagne, A.¹ Paik, D.H.² Barret, P.C.³ Martin, M.M.⁴ Zewail, A.H.⁵

32
- 80052246942
- S. Smolarek A. Vdovin A. M. Rijs C. A. van Walree M. Z. Zgierski W. J. Buma J. Phys. Chem. A 2011 115 9399
- (2011) J. Phys. Chem. A , vol.115 , pp. 9399
- Smolarek, S.¹ Vdovin, A.² Rijs, A.M.³ Van Walree, C.A.⁴ Zgierski, M.Z.⁵ Buma, W.J.⁶

33
- 80052205259
- A. M. Rijs E. R. Kay D. A. Leigh W. J. Buma J. Phys. Chem. A 2011 115 9669
- (2011) J. Phys. Chem. A , vol.115 , pp. 9669
- Rijs, A.M.¹ Kay, E.R.² Leigh, D.A.³ Buma, W.J.⁴

34
- 4344601881
- C. Manca C. Tanner S. Coussan A. Bach S. Leutwyler J. Chem. Phys. 2004 121 2578
- (2004) J. Chem. Phys. , vol.121 , pp. 2578
- Manca, C.¹ Tanner, C.² Coussan, S.³ Bach, A.⁴ Leutwyler, S.⁵

35
- 0037470118
- D. S. Larsen M. Vengris I. H. M. van Stokkum M. A. van der Horst R. A. Cordfunke K. J. Hellingwerf R. van Grondelle Chem. Phys. Lett. 2003 369 563
- (2003) Chem. Phys. Lett. , vol.369 , pp. 563
- Larsen, D.S.¹ Vengris, M.² Van Stokkum, I.H.M.³ Van Der Horst, M.A.⁴ Cordfunke, R.A.⁵ Hellingwerf, K.J.⁶ Van Grondelle, R.⁷

36
- 10844225583
- O. Christiansen H. Koch P. Jørgensen Chem. Phys. Lett. 1995 243 409
- (1995) Chem. Phys. Lett. , vol.243 , pp. 409
- Christiansen, O.¹ Koch, H.² Jørgensen, P.³

37
- 46749112292
- A. Hellweg S. Grün C. Hättig Phys. Chem. Chem. Phys. 2008 10 4119
- (2008) Phys. Chem. Chem. Phys. , vol.10 , pp. 4119
- Hellweg, A.¹ Grün, S.² Hättig, C.³

38
- 0034301458
- C. Hättig F. Weigend J. Chem. Phys. 2000 113 5154
- (2000) J. Chem. Phys. , vol.113 , pp. 5154
- Hättig, C.¹ Weigend, F.²

39
- 33644810669
- TURBOMOLE V6.1, 2009; a development of the University of Karlsruhe and Forschungszentrum Karlsruhe GmbH, 1989-2007, TURBOMOLE GmbH since 2007. (accessed July 8, 2012)
- C. Hättig A. Hellweg A. Köhn Phys. Chem. Chem. Phys. 2006 8 1159
- (2006) Phys. Chem. Chem. Phys. , vol.8 , pp. 1159
- Hättig, C.¹ Hellweg, A.² Köhn, A.³

40
- 0001242018
- A. K. Wilson D. E. Woon K. A. Peterson T. H. Dunning J. Chem. Phys. 1999 110 7667
- (1999) J. Chem. Phys. , vol.110 , pp. 7667
- Wilson, A.K.¹ Woon, D.E.² Peterson, K.A.³ Dunning, T.H.⁴

41
- 0037154597
- The spectral resolution of the laser system employed in ref. 29 did not allow the syn and anti conformations to be distinguished CC2 and EOM-CCSD calculations on the vertical excitation energies of the OMpCA chromophore have been reported before in ref. 19. Our calculations are in excellent agreement with these results
- F. Weigend A. Köhn C. Hättig J. Chem. Phys. 2002 116 3175
- (2002) J. Chem. Phys. , vol.116 , pp. 3175
- Weigend, F.¹ Köhn, A.² Hättig, C.³

42
- 62449243005
- M. de Groot R. W. Field W. J. Buma Proc. Natl. Acad. Sci. U. S. A. 2009 106 2510
- (2009) Proc. Natl. Acad. Sci. U. S. A. , vol.106 , pp. 2510
- De Groot, M.¹ Field, R.W.² Buma, W.J.³

43
- 0035124654
- V. Blanchet M. Z. Zgierski A. Stolow J. Chem. Phys. 2001 114 1194
- (2001) J. Chem. Phys. , vol.114 , pp. 1194
- Blanchet, V.¹ Zgierski, M.Z.² Stolow, A.³

44
- 0035125204
- -1 transitions were assigned to the s-trans and s-cis conformations, respectively. Recent mid-IR absorption studies show, however, that this assignment should be reversed. 50
- M. Schmitt S. Lochbrunner J. P. Shaffer J. J. Larsen M. Z. Zgierski A. Stolow J. Chem. Phys. 2001 114 1206
- (2001) J. Chem. Phys. , vol.114 , pp. 1206
- Schmitt, M.¹ Lochbrunner, S.² Shaffer, J.P.³ Larsen, J.J.⁴ Zgierski, M.Z.⁵ Stolow, A.⁶

45
- 84877010929
- E. M. M. Tan S. Amirjalayer S. Smolarek A. Vdovin A. M. Rijs W. J. Buma J. Phys. Chem. B 2013 117 4798
- (2013) J. Phys. Chem. B , vol.117 , pp. 4798
- Tan, E.M.M.¹ Amirjalayer, S.² Smolarek, S.³ Vdovin, A.⁴ Rijs, A.M.⁵ Buma, W.J.⁶

46
- 0000536603
- G. J. Brealey M. Kasha J. Am. Chem. Soc. 1955 77 4462
- (1955) J. Am. Chem. Soc. , vol.77 , pp. 4462
- Brealey, G.J.¹ Kasha, M.²

47
- 30444460750
- C. Manca C. Tanner S. Leutwyler Int. Rev. Phys. Chem. 2005 24 457
- (2005) Int. Rev. Phys. Chem. , vol.24 , pp. 457
- Manca, C.¹ Tanner, C.² Leutwyler, S.³

48
- 76149093551
- J. J. Newby C. W. Muller C.-P. Liu T. S. Zwier J. Am. Chem. Soc. 2010 132 1611
- (2010) J. Am. Chem. Soc. , vol.132 , pp. 1611
- Newby, J.J.¹ Muller, C.W.² Liu, C.-P.³ Zwier, T.S.⁴

49
- 0035936982
- A. Yamada S. Yamamoto T. Yamamoto T. Kakitani J. Mol. Struct.: THEOCHEM 2001 536 195
- (2001) J. Mol. Struct.: THEOCHEM , vol.536 , pp. 195
- Yamada, A.¹ Yamamoto, S.² Yamamoto, T.³ Kakitani, T.⁴

50
- 70349731658
- In the depletion spectra of the s-trans conformers a transition is observed at similar vibrational energies though with a somewhat lower intensity
- M. Boggio-Pasqua M. A. Robb G. Groenhof J. Am. Chem. Soc. 2009 131 13580
- (2009) J. Am. Chem. Soc. , vol.131 , pp. 13580
- Boggio-Pasqua, M.¹ Robb, M.A.² Groenhof, G.³

51
- 34249939259
- M. S. de Vries P. Hobza Annu. Rev. Phys. Chem. 2007 58 585
- (2007) Annu. Rev. Phys. Chem. , vol.58 , pp. 585
- De Vries, M.S.¹ Hobza, P.²

52
- 82955240992
- -1, on the other hand, skeleton modes are found that appear to be more likely to be Franck-Condon active
- J. A. Sebreez T. S. Zwier Phys. Chem. Chem. Phys. 2012 14 173
- (2012) Phys. Chem. Chem. Phys. , vol.14 , pp. 173
- Sebreez, J.A.¹ Zwier, T.S.²

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.