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Volumn 347, Issue 2, 2013, Pages 97-106

Heavy metal tolerance genes alter cellular thermodynamics in Pseudomonas putida and river Pseudomonas spp. and influence amebal predation

Author keywords

Acanthamoeba castellanii; Chronic stress; Energy transfer; Protozoa; Trophic interactions

Indexed keywords

HEAVY METAL; RNA 16S;

EID: 84884716104     PISSN: 03781097     EISSN: 15746968     Source Type: Journal    
DOI: 10.1111/1574-6968.12226     Document Type: Letter
Times cited : (4)

References (43)
  • 2
  • 3
    • 0242414359 scopus 로고    scopus 로고
    • Mineral surfaces and bioavailability of heavy metals: a molecular-scale perspective
    • Brown GE Jr, Foster AL & Ostergren JD (1999) Mineral surfaces and bioavailability of heavy metals: a molecular-scale perspective. P Nat Acad Sci USA 96: 3388-3395.
    • (1999) P Nat Acad Sci USA , vol.96 , pp. 3388-3395
    • Brown Jr., G.E.1    Foster, A.L.2    Ostergren, J.D.3
  • 4
    • 58149200948 scopus 로고    scopus 로고
    • The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
    • Database issue
    • Cole JR, Wang Q, Cardenas E et al. (2009) The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res 37: (Database issue): D141-D145.
    • (2009) Nucleic Acids Res , vol.37
    • Cole, J.R.1    Wang, Q.2    Cardenas, E.3
  • 5
    • 1642348643 scopus 로고    scopus 로고
    • Molecular evidence for the evolution of metal homeostasis genes by lateral gene transfer in bacteria from the deep terrestrial subsurface
    • Coombs JM & Barkay T (2004) Molecular evidence for the evolution of metal homeostasis genes by lateral gene transfer in bacteria from the deep terrestrial subsurface. Appl Environ Microbiol 70: 1698-1707.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 1698-1707
    • Coombs, J.M.1    Barkay, T.2
  • 6
    • 66749129025 scopus 로고    scopus 로고
    • Amoebic grazing of freshwater Synechococcus strains rich in phycocyanin
    • Dillon A & Parry DP (2009) Amoebic grazing of freshwater Synechococcus strains rich in phycocyanin. FEMS Microbiol Ecol 69: 106-112.
    • (2009) FEMS Microbiol Ecol , vol.69 , pp. 106-112
    • Dillon, A.1    Parry, D.P.2
  • 7
    • 0000549510 scopus 로고
    • On the abundance and distribution of protozoa and their food in a productive freshwater pond
    • Finlay BJ, Clarke KJ, Cowling AJ, Hindle RM & Rogerson A (1988) On the abundance and distribution of protozoa and their food in a productive freshwater pond. Eur J Protistol 23: 205-217.
    • (1988) Eur J Protistol , vol.23 , pp. 205-217
    • Finlay, B.J.1    Clarke, K.J.2    Cowling, A.J.3    Hindle, R.M.4    Rogerson, A.5
  • 8
    • 0242405582 scopus 로고    scopus 로고
    • Protistan grazing analysis by flow cytometry using prey labeled by in vivo expression of fluorescent proteins
    • Fu Y, O'Kelly C, Sieracki M & Distel D (2003) Protistan grazing analysis by flow cytometry using prey labeled by in vivo expression of fluorescent proteins. Appl Environ Microbiol 69: 6848-6855.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 6848-6855
    • Fu, Y.1    O'Kelly, C.2    Sieracki, M.3    Distel, D.4
  • 9
    • 79251619060 scopus 로고    scopus 로고
    • Use of microcalorimetry to determine the costs and benefits to Pseudomonas putida strain KT2440 of harboring cadmium efflux genes
    • Gibbons SM, Feris K, McGuirl MA, Morales SE, Hynninen A, Ramsey PW & Gannon JE (2011) Use of microcalorimetry to determine the costs and benefits to Pseudomonas putida strain KT2440 of harboring cadmium efflux genes. Appl Environ Microbiol 77: 108-113.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 108-113
    • Gibbons, S.M.1    Feris, K.2    McGuirl, M.A.3    Morales, S.E.4    Hynninen, A.5    Ramsey, P.W.6    Gannon, J.E.7
  • 10
    • 79951810485 scopus 로고    scopus 로고
    • Microbial community structures in anoxic freshwater lake sediment along a metal contamination gradient
    • Gough HL & Stahl DA (2011) Microbial community structures in anoxic freshwater lake sediment along a metal contamination gradient. ISME J 5: 543-558.
    • (2011) ISME J , vol.5 , pp. 543-558
    • Gough, H.L.1    Stahl, D.A.2
  • 11
    • 51449101271 scopus 로고    scopus 로고
    • Metal impacts on microbial biomass in the anoxic sediments of a contaminated lake
    • Gough HL, Dahl AL, Nolan MA, Gaillard JF & Stahl DA (2008) Metal impacts on microbial biomass in the anoxic sediments of a contaminated lake. J Geophys Res 113: G02017.
    • (2008) J Geophys Res , vol.113
    • Gough, H.L.1    Dahl, A.L.2    Nolan, M.A.3    Gaillard, J.F.4    Stahl, D.A.5
  • 12
    • 69949099870 scopus 로고    scopus 로고
    • Growth phase and elemental stoichiometry of bacterial prey influences ciliate grazing selectivity
    • Gruber DF, Tuorto S & Taghon GL (2009) Growth phase and elemental stoichiometry of bacterial prey influences ciliate grazing selectivity. J Eukaryot Microbiol 56: 466-471.
    • (2009) J Eukaryot Microbiol , vol.56 , pp. 466-471
    • Gruber, D.F.1    Tuorto, S.2    Taghon, G.L.3
  • 13
    • 0029668883 scopus 로고    scopus 로고
    • Natural background determination and impact quantification in trace metal-contaminated river sediments
    • Helgen SO & Moore JN (1996) Natural background determination and impact quantification in trace metal-contaminated river sediments. Environ Sci Technol 30: 129-135.
    • (1996) Environ Sci Technol , vol.30 , pp. 129-135
    • Helgen, S.O.1    Moore, J.N.2
  • 14
    • 77951499585 scopus 로고    scopus 로고
    • Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community
    • Hemme CL, Deng Y, Gentry TJ et al. (2010) Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community. ISME J 4: 660-672.
    • (2010) ISME J , vol.4 , pp. 660-672
    • Hemme, C.L.1    Deng, Y.2    Gentry, T.J.3
  • 15
    • 0036690693 scopus 로고    scopus 로고
    • Phylogenetic analysis of intestinal microflora indicates a novel Mycoplasma phylotype in farmed and wild salmon
    • Holben WE, Williams P, Saarinen M, Särkilahti LK & Apajalahti JHA (2002) Phylogenetic analysis of intestinal microflora indicates a novel Mycoplasma phylotype in farmed and wild salmon. Microb Ecol 44: 175-185.
    • (2002) Microb Ecol , vol.44 , pp. 175-185
    • Holben, W.E.1    Williams, P.2    Saarinen, M.3    Särkilahti, L.K.4    Apajalahti, J.H.A.5
  • 16
    • 61349127139 scopus 로고    scopus 로고
    • Effects of heavy metals on riverine benthic macroinvertebrate assemblages with reference to potential food availability for drift-feeding fishes
    • Iwasaki U, Kagaya T, Miyamoto K & Matsuda H (2009) Effects of heavy metals on riverine benthic macroinvertebrate assemblages with reference to potential food availability for drift-feeding fishes. Environ Toxicol Chem 28: 354-363.
    • (2009) Environ Toxicol Chem , vol.28 , pp. 354-363
    • Iwasaki, U.1    Kagaya, T.2    Miyamoto, K.3    Matsuda, H.4
  • 17
  • 19
    • 0031890704 scopus 로고    scopus 로고
    • Size-selective predation on groundwater bacteria by nanoflagellates in an organic-contaminated aquifer
    • Kinner NE, Harvey RW, Blakeslee K, Novarino KG & Meeker LD (1998) Size-selective predation on groundwater bacteria by nanoflagellates in an organic-contaminated aquifer. Appl Environ Microbiol 64: 618-625.
    • (1998) Appl Environ Microbiol , vol.64 , pp. 618-625
    • Kinner, N.E.1    Harvey, R.W.2    Blakeslee, K.3    Novarino, K.G.4    Meeker, L.D.5
  • 20
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • Stackebrandt E & Goodfellow M, eds) Wiley, Chichester, UK.
    • Lane DJ (1991) 16S/23S rRNA sequencing. Nucleic Acid Techniques in Bacterial Systematics, (Stackebrandt E & Goodfellow M, eds), pp. 115-148. Wiley, Chichester, UK.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-148
    • Lane, D.J.1
  • 21
    • 41949128177 scopus 로고    scopus 로고
    • Interplay of different transporters in the mediation of divalent heavy metal resistance in Pseudomonas putida KT2440
    • Leedjarv A, Ivask A & Virta M (2008) Interplay of different transporters in the mediation of divalent heavy metal resistance in Pseudomonas putida KT2440. J Bacteriol 190: 2680-2689.
    • (2008) J Bacteriol , vol.190 , pp. 2680-2689
    • Leedjarv, A.1    Ivask, A.2    Virta, M.3
  • 22
    • 78651511845 scopus 로고    scopus 로고
    • Microbial seed banks: the ecological and evolutionary implications of dormancy
    • Lennon J & Jones SE (2011) Microbial seed banks: the ecological and evolutionary implications of dormancy. Nat Rev Microbiol 9: 119-130.
    • (2011) Nat Rev Microbiol , vol.9 , pp. 119-130
    • Lennon, J.1    Jones, S.E.2
  • 24
    • 84884723782 scopus 로고    scopus 로고
    • Microcal VP-ITC user's manual, Northampton, MA.
    • Microcal VP-ITC user's manual (2002) Northampton, MA.
    • (2002)
  • 25
    • 83555165173 scopus 로고    scopus 로고
    • Heavy metal resistance in Cupriavidus metallidurans CH34 is governed by an intricate transcriptional network
    • Monsieurs P, Moors H, Van Houdt R, Janssen PJ, Coninx I, Mergeay M & Leys N (2011) Heavy metal resistance in Cupriavidus metallidurans CH34 is governed by an intricate transcriptional network. Biometals 24: 1133-1151.
    • (2011) Biometals , vol.24 , pp. 1133-1151
    • Monsieurs, P.1    Moors, H.2    Van Houdt, R.3    Janssen, P.J.4    Coninx, I.5    Mergeay, M.6    Leys, N.7
  • 26
    • 0020644188 scopus 로고
    • Comparison between direct methods for determination of microbial cell volume: electron microscopy and electronic particle sizing
    • Montesinos E, Esteve I & Guerrero R (1983) Comparison between direct methods for determination of microbial cell volume: electron microscopy and electronic particle sizing. Appl Environ Microbiol 45: 1651-1658.
    • (1983) Appl Environ Microbiol , vol.45 , pp. 1651-1658
    • Montesinos, E.1    Esteve, I.2    Guerrero, R.3
  • 27
    • 0032977236 scopus 로고    scopus 로고
    • Microbial heavy-metal resistance
    • Nies DH (1999) Microbial heavy-metal resistance. Appl Microbiol Biotechnol 51: 730-750.
    • (1999) Appl Microbiol Biotechnol , vol.51 , pp. 730-750
    • Nies, D.H.1
  • 28
    • 0037565061 scopus 로고    scopus 로고
    • Efflux-mediated heavy metal resistance in prokaryotes
    • Nies DH (2003) Efflux-mediated heavy metal resistance in prokaryotes. FEMS Microbiol Rev 27: 313-339.
    • (2003) FEMS Microbiol Rev , vol.27 , pp. 313-339
    • Nies, D.H.1
  • 29
    • 0001866997 scopus 로고
    • Stratigraphy and chemistry of sulfidic flood-plain sediments in the Upper Clark Fork Valley, Montana
    • American Chemical Society, Washington, DC.
    • Nimick DA & Moore JN (1994) Stratigraphy and chemistry of sulfidic flood-plain sediments in the Upper Clark Fork Valley, Montana. Environmental Geochemistry of Sulfide Oxidation. pp. 276-288. American Chemical Society, Washington, DC.
    • (1994) Environmental Geochemistry of Sulfide Oxidation , pp. 276-288
    • Nimick, D.A.1    Moore, J.N.2
  • 30
    • 84868098916 scopus 로고    scopus 로고
    • IB-type ATPase genes among bacteria isolated from the uranium rich deposit of Domiasiat in North East India
    • IB-type ATPase genes among bacteria isolated from the uranium rich deposit of Domiasiat in North East India. PLoS one 7: e48199.
    • (2012) PLoS one , vol.7
    • Nongkhlaw, M.1    Kumar, R.2    Acharya, C.3    Joshi, S.R.4
  • 31
    • 0001453376 scopus 로고    scopus 로고
    • Predicting the ecological effects of herbicides
    • Pratt J, Melendez A, Barreiro R & Bowers N (1997) Predicting the ecological effects of herbicides. Ecol Appl 7: 1117-1124.
    • (1997) Ecol Appl , vol.7 , pp. 1117-1124
    • Pratt, J.1    Melendez, A.2    Barreiro, R.3    Bowers, N.4
  • 32
    • 79961135005 scopus 로고    scopus 로고
    • R Development Core Team. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0, URL
    • R Development Core Team (2011) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0, URL http://www.R-project.org/.
    • (2011) R: A Language and Environment for Statistical Computing
  • 33
    • 27444443522 scopus 로고    scopus 로고
    • Relationship between communities and processes; new insights from a field study of a contaminated ecosystem
    • Ramsey PW, Rillig MC, Feris KP, Gordon NS, Moore JN, Holben WE & Gannon JE (2005) Relationship between communities and processes; new insights from a field study of a contaminated ecosystem. Ecol Lett 8: 1201-1210.
    • (2005) Ecol Lett , vol.8 , pp. 1201-1210
    • Ramsey, P.W.1    Rillig, M.C.2    Feris, K.P.3    Gordon, N.S.4    Moore, J.N.5    Holben, W.E.6    Gannon, J.E.7
  • 35
    • 0242417580 scopus 로고    scopus 로고
    • Impact of protozoan grazing on bacterial community structure in soil microcosms
    • Rønn R, McCaig AE, Griffiths B & Prosser J (2002) Impact of protozoan grazing on bacterial community structure in soil microcosms. Appl Environ Microbiol 68: 6094-6105.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 6094-6105
    • Rønn, R.1    McCaig, A.E.2    Griffiths, B.3    Prosser, J.4
  • 36
    • 0029792315 scopus 로고    scopus 로고
    • Bacterial heavy metal resistance: new surprises
    • Silver S & Phung LT (1996) Bacterial heavy metal resistance: new surprises. Annu Rev Microbiol 50: 753-789.
    • (1996) Annu Rev Microbiol , vol.50 , pp. 753-789
    • Silver, S.1    Phung, L.T.2
  • 37
    • 28644437016 scopus 로고    scopus 로고
    • A bacterial view of the periodic table: genes and proteins for toxic inorganic ions
    • Silver S & Phung LT (2005) A bacterial view of the periodic table: genes and proteins for toxic inorganic ions. J Ind Microbiol Biotechnol 32: 587-605.
    • (2005) J Ind Microbiol Biotechnol , vol.32 , pp. 587-605
    • Silver, S.1    Phung, L.T.2
  • 38
    • 65549122062 scopus 로고    scopus 로고
    • Horizontal gene transfer in metal and radionuclide contaminated soils
    • Clifton, NJ
    • Sobecky PA & Coombs JM (2009) Horizontal gene transfer in metal and radionuclide contaminated soils. Methods Mol Biol Clifton, NJ 532: 455-472.
    • (2009) Methods Mol Biol , vol.532 , pp. 455-472
    • Sobecky, P.A.1    Coombs, J.M.2
  • 39
    • 84866361099 scopus 로고    scopus 로고
    • Persistent metal contamination limits lotic ecosystem heterotrophic metabolism after more than 100 years of exposure: a novel application of the resazurin resorufin smart tracer
    • Stanaway D, Haggerty R, Benner S, Flores A & Feris K (2012) Persistent metal contamination limits lotic ecosystem heterotrophic metabolism after more than 100 years of exposure: a novel application of the resazurin resorufin smart tracer. Environ Sci Technol 46: 9862-9871.
    • (2012) Environ Sci Technol , vol.46 , pp. 9862-9871
    • Stanaway, D.1    Haggerty, R.2    Benner, S.3    Flores, A.4    Feris, K.5
  • 40
    • 32044458422 scopus 로고    scopus 로고
    • Thermodynamics of microbial growth and metabolism: an analysis of the current situation
    • von Stockar U, Maskow T, Liu J, Marison IW & Patiño R (2006) Thermodynamics of microbial growth and metabolism: an analysis of the current situation. J Biotechnol 121: 517-533.
    • (2006) J Biotechnol , vol.121 , pp. 517-533
    • von Stockar, U.1    Maskow, T.2    Liu, J.3    Marison, I.W.4    Patiño, R.5
  • 41
    • 3242695831 scopus 로고    scopus 로고
    • Protozoan predation, diversifying selection, and evolution of antigenic diversity of salmonella
    • Wildschutte H, Wolfe D, Tamewitz A & Lawrence J (2004) Protozoan predation, diversifying selection, and evolution of antigenic diversity of salmonella. P Nat Acad Sci USA 101: 10644-10649.
    • (2004) P Nat Acad Sci USA , vol.101 , pp. 10644-10649
    • Wildschutte, H.1    Wolfe, D.2    Tamewitz, A.3    Lawrence, J.4
  • 42
    • 33745099639 scopus 로고    scopus 로고
    • Feeding characteristics of an amoeba (Lobosea: Naegleria) grazing upon cyanobacteria: food selection, ingestion and digestion progress
    • Xinyao L, Miao S, Yonghong L, Yin G, Zhongkai Donghui W, Weizhong W & Chencai A (2006) Feeding characteristics of an amoeba (Lobosea: Naegleria) grazing upon cyanobacteria: food selection, ingestion and digestion progress. Microb Ecol 51: 315-325.
    • (2006) Microb Ecol , vol.51 , pp. 315-325
    • Xinyao, L.1    Miao, S.2    Yonghong, L.3    Yin, G.4    Zhongkai Donghui, W.5    Weizhong, W.6    Chencai, A.7
  • 43
    • 84874521840 scopus 로고    scopus 로고
    • Microbial functional genes reveal selection of microbial community by PAHs in polluted soils
    • Zhang Z, Zhao X, Liang Y, Li G & Zhou J (2013) Microbial functional genes reveal selection of microbial community by PAHs in polluted soils. Environ Chem Lett 11: 11-17.
    • (2013) Environ Chem Lett , vol.11 , pp. 11-17
    • Zhang, Z.1    Zhao, X.2    Liang, Y.3    Li, G.4    Zhou, J.5


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