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Volumn 13, Issue 1, 2013, Pages

Positive selection in the adhesion domain of Mus sperm Adam genes through gene duplications and function-driven gene complex formations

Author keywords

Adam genes; Neofunctionalization; Positive selection; Rodents; Sperm

Indexed keywords

ADAPTATION; ADHESION; DIVERGENCE; GENE EXPRESSION; PHYLOGENETICS; PRIMATE; RODENT; SELECTION; SPERM COMPETITION;

EID: 84884690714     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-13-217     Document Type: Article
Times cited : (10)

References (43)
  • 1
    • 33644981509 scopus 로고    scopus 로고
    • A map of recent positive selection in the human genome
    • 10.1371/journal.pbio.0040446
    • A map of recent positive selection in the human genome. Voight BF, Kudaravalli S, Wen X, Pritchard JK, PLoS Biol 2006 4 446 458 10.1371/journal.pbio.0040446
    • (2006) PLoS Biol , vol.4 , pp. 446-458
    • Voight, B.F.1    Kudaravalli, S.2    Wen, X.3    Pritchard, J.K.4
  • 2
    • 50849122974 scopus 로고    scopus 로고
    • Patterns of positive selection in six mammalian genomes
    • 10.1371/journal.pgen.1000144 18670650
    • Patterns of positive selection in six mammalian genomes. Kosiol C, Vinar T, Da Fonseca RR, Hubisz MJ, Bustamante CD, Siepel A, PLoS Genet 2008 4 1000144 10.1371/journal.pgen.1000144 18670650
    • (2008) PLoS Genet , vol.4 , pp. 51000144
    • Kosiol, C.1    Vinar, T.2    Da Fonseca, R.R.3    Hubisz, M.J.4    Bustamante, C.D.5    Siepel, A.6
  • 3
    • 77953809541 scopus 로고    scopus 로고
    • Constraints and plasticity in genome and molecular-phenome evolution
    • 20548290
    • Constraints and plasticity in genome and molecular-phenome evolution. Koonin EV, Wolf YI, Nat Rev Genet 2010 11 487 498 20548290
    • (2010) Nat Rev Genet , vol.11 , pp. 487-498
    • Koonin, E.V.1    Wolf, Y.I.2
  • 4
    • 85047700164 scopus 로고    scopus 로고
    • The rapid evolution of reproductive proteins
    • DOI 10.1038/nrg733
    • The rapid evolution of reproductive proteins. Swanson WJ, Vacquier VD, Genetics 2002 3 137 144 11836507 (Pubitemid 34506597)
    • (2002) Nature Reviews Genetics , vol.3 , Issue.2 , pp. 137-144
    • Swanson, W.J.1    Vacquier, V.D.2
  • 5
    • 1642457281 scopus 로고    scopus 로고
    • Shall we dance or shall we fight? Using DNA sequence data to untangle controversies surrounding sexual selection
    • DOI 10.1139/g03-109
    • Shall we dance or shall we fight? Using DNA sequence data to untangle controversies surrounding sexual selection. Civetta A, Genome 2003 46 925 929 10.1139/g03-109 14663506 (Pubitemid 38122429)
    • (2003) Genome , vol.46 , Issue.6 , pp. 925-929
    • Civetta, A.1
  • 6
    • 32544445408 scopus 로고    scopus 로고
    • Evolution of reproductive proteins from animals and plants
    • DOI 10.1530/rep.1.00357
    • Evolution of reproductive proteins from animals and plants. Clark NL, Aagaard JE, Swanson WJ, Reproduction 2006 131 11 22 10.1530/rep.1.00357 16388004 (Pubitemid 43230698)
    • (2006) Reproduction , vol.131 , Issue.1 , pp. 11-22
    • Clark, N.L.1    Aagaard, J.E.2    Swanson, W.J.3
  • 8
    • 54249132173 scopus 로고    scopus 로고
    • Causes and consequences of the evolution of reproductive proteins
    • 10.1387/ijdb.082577lt 18649289
    • Causes and consequences of the evolution of reproductive proteins. Turner LM, Hoekstra HE, Int J Dev Biol 2008 52 769 780 10.1387/ijdb.082577lt 18649289
    • (2008) Int J Dev Biol , vol.52 , pp. 769-780
    • Turner, L.M.1    Hoekstra, H.E.2
  • 9
    • 77952792808 scopus 로고    scopus 로고
    • Sperm proteomics reveals intensified selection on mouse sperm membrane and acrosome genes
    • 10.1093/molbev/msq007 20080865
    • Sperm proteomics reveals intensified selection on mouse sperm membrane and acrosome genes. Dorus S, Wasbrough ER, Busby J, Wilkin EC, Karr TL, Mol Biol Evol 2010 27 1235 1246 10.1093/molbev/msq007 20080865
    • (2010) Mol Biol Evol , vol.27 , pp. 1235-1246
    • Dorus, S.1    Wasbrough, E.R.2    Busby, J.3    Wilkin, E.C.4    Karr, T.L.5
  • 10
    • 0037227364 scopus 로고    scopus 로고
    • Positive selection within sperm-egg adhesion domains of fertilin: An ADAM gene with a potential role in fertilization
    • DOI 10.1093/molbev/msg002
    • Positive selection within sperm-egg adhesion domains of fertilin: an ADAM gene with a potential role in fertilization. Civetta A, Mol Biol Evol 2003 20 21 29 10.1093/molbev/msg002 12519902 (Pubitemid 36077895)
    • (2003) Molecular Biology and Evolution , vol.20 , Issue.1 , pp. 21-29
    • Civetta, A.1
  • 11
    • 1942533493 scopus 로고    scopus 로고
    • Positive Selection at Reproductive ADAM Genes with Potential Intercellular Binding Activity
    • DOI 10.1093/molbev/msh080
    • Positive selection at reproductive ADAM genes with potential intercellular binding activity. Glassey B, Civetta A, Mol Biol Evol 2004 21 851 859 10.1093/molbev/msh080 14963094 (Pubitemid 38529727)
    • (2004) Molecular Biology and Evolution , vol.21 , Issue.5 , pp. 851-859
    • Glassey, B.1    Civetta, A.2
  • 12
    • 77957575141 scopus 로고    scopus 로고
    • Sexual selection and the molecular evolution of ADAM proteins
    • 10.1007/s00239-010-9382-7 20730583
    • Sexual selection and the molecular evolution of ADAM proteins. Finn S, Civetta A, J Mol Evol 2010 71 231 240 10.1007/s00239-010-9382-7 20730583
    • (2010) J Mol Evol , vol.71 , pp. 231-240
    • Finn, S.1    Civetta, A.2
  • 13
    • 77749339124 scopus 로고    scopus 로고
    • Positive selection neighboring functionally essential sites and disease-implicated regions of mammalian reproductive proteins
    • 10.1186/1471-2148-10-17 20089169
    • Positive selection neighboring functionally essential sites and disease-implicated regions of mammalian reproductive proteins. Morgan CC, Loughran NB, Walsh T, Harrison AJ, O'Connell MJ, BMC Evol Biol 2010 10 17 10.1186/1471-2148-10-17 20089169
    • (2010) BMC Evol Biol , vol.10 , pp. 17
    • Morgan, C.C.1    Loughran, N.B.2    Walsh, T.3    Harrison, A.J.4    O'Connell, M.J.5
  • 14
    • 84857632145 scopus 로고    scopus 로고
    • The molecular evolution of animal reproductive tract proteins: What have we learned from mating-system comparisons?
    • Article ID 908735
    • The molecular evolution of animal reproductive tract proteins: what have we learned from mating-system comparisons? Wong A, Int J Evol Biol 2011 2011 9 Article ID 908735
    • (2011) Int J Evol Biol , vol.2011 , pp. 9
    • Wong, A.1
  • 15
    • 0033847096 scopus 로고    scopus 로고
    • Body mass, testes mass, and sperm size in murine rodents
    • Body mass, testes mass, and sperm size in murine rodents. Breed WG, Taylor J, J Mammal 2000 81 758 768 10.1644/1545-1542(2000)081<0758: BMTMAS>2.3.CO;2 (Pubitemid 30661309)
    • (2000) Journal of Mammalogy , vol.81 , Issue.3 , pp. 758-768
    • Breed, W.G.1    Taylor, J.2
  • 18
    • 0037062937 scopus 로고    scopus 로고
    • Exceptional sperm cooperation in the wood mouse
    • DOI 10.1038/nature00832
    • Exceptional sperm cooperation in the wood mouse. Moore H, Dvorakova K, Jenkins N, Breed W, Nature 2002 418 174 177 10.1038/nature00832 12110888 (Pubitemid 34773770)
    • (2002) Nature , vol.418 , Issue.6894 , pp. 174-177
    • Moore, H.1    Dvorakova, K.2    Jenkins, N.3    Breed, W.4
  • 19
    • 76749104240 scopus 로고    scopus 로고
    • Competition drives cooperation among closely related sperm of deer mice
    • 10.1038/nature08736 20090679
    • Competition drives cooperation among closely related sperm of deer mice. Fisher HS, Hoekstra HE, Nature 2010 463 801 803 10.1038/nature08736 20090679
    • (2010) Nature , vol.463 , pp. 801-803
    • Fisher, H.S.1    Hoekstra, H.E.2
  • 20
    • 77952111403 scopus 로고    scopus 로고
    • Impaired sperm aggregation in Adam2 and Adam3 null mice
    • 10.1016/j.fertnstert.2010.03.013 20400072
    • Impaired sperm aggregation in Adam2 and Adam3 null mice. Han C, Kwon JT, Park I, Lee B, Jin S, Choi H, Cho C, Fertil Steril 2010 93 2754 2756 10.1016/j.fertnstert.2010.03.013 20400072
    • (2010) Fertil Steril , vol.93 , pp. 2754-2756
    • Han, C.1    Kwon, J.T.2    Park, I.3    Lee, B.4    Jin, S.5    Choi, H.6    Cho, C.7
  • 21
    • 0032710099 scopus 로고    scopus 로고
    • Male mice deficient for germ-cell cyritestin are infertile
    • 10.1095/biolreprod61.6.1445 10569988
    • Male mice deficient for germ-cell cyritestin are infertile. Shamsadin R, Adham IM, Nayernia K, Heinlein UA, Oberwinkler H, Engel W, Biol Reprod 1999 61 1445 1451 10.1095/biolreprod61.6.1445 10569988
    • (1999) Biol Reprod , vol.61 , pp. 1445-1451
    • Shamsadin, R.1    Adham, I.M.2    Nayernia, K.3    Heinlein, U.A.4    Oberwinkler, H.5    Engel, W.6
  • 22
    • 0035337709 scopus 로고    scopus 로고
    • Analysis of loss of adhesive function in sperm lacking cyritestin or fertilin β
    • DOI 10.1006/dbio.2001.0166
    • Analysis of loss of adhesive function in sperm lacking cyritestin or fertilin beta. Nishimura H, Cho C, Branciforte DR, Myles DG, Primakoff P, Dev Biol 2001 233 204 213 10.1006/dbio.2001.0166 11319869 (Pubitemid 32411305)
    • (2001) Developmental Biology , vol.233 , Issue.1 , pp. 204-213
    • Nishimura, H.1    Cho, C.2    Branciforte, D.R.3    Myles, D.G.4    Primakoff, P.5
  • 23
    • 67649654442 scopus 로고    scopus 로고
    • Disruption of ADAM3 impairs the migration of sperm into oviduct in mouse
    • 10.1095/biolreprod.108.074021 19339711
    • Disruption of ADAM3 impairs the migration of sperm into oviduct in mouse. Yamaguchi R, Muro Y, Isotani A, Tokuhiro K, Takumi K, Adham I, Ikawa M, Okabe M, Biol Reprod 2009 81 142 146 10.1095/biolreprod.108.074021 19339711
    • (2009) Biol Reprod , vol.81 , pp. 142-146
    • Yamaguchi, R.1    Muro, Y.2    Isotani, A.3    Tokuhiro, K.4    Takumi, K.5    Adham, I.6    Ikawa, M.7    Okabe, M.8
  • 25
    • 4544250782 scopus 로고    scopus 로고
    • Possible function of the ADAM1a/ADAM2 fertilin complex in the appearance of ADAM3 on the sperm surface
    • DOI 10.1074/jbc.M314249200
    • Possible function of the ADAM1a/ADAM2 Fertilin complex in the appearance of ADAM3 on the sperm surface. Nishimura H, Kim E, Nakanishi T, Baba T, J Biol Chem 2004 279 34957 34962 10.1074/jbc.M314249200 15194697 (Pubitemid 39318132)
    • (2004) Journal of Biological Chemistry , vol.279 , Issue.33 , pp. 34957-34962
    • Nishimura, H.1    Kim, E.2    Nakanishi, T.3    Baba, T.4
  • 27
    • 84867572642 scopus 로고    scopus 로고
    • Testicular and epididymal ADAMs: Expression and function during fertilization
    • 10.1038/nrurol.2012.167 22926424
    • Testicular and epididymal ADAMs: expression and function during fertilization. Cho C, Nat Rev Urol 2012 9 550 560 10.1038/nrurol.2012.167 22926424
    • (2012) Nat Rev Urol , vol.9 , pp. 550-560
    • Cho, C.1
  • 28
    • 33847372062 scopus 로고    scopus 로고
    • When size makes a difference: Allometry, life-history and morphological evolution of capuchins (Cebus) and squirrels (Saimiri) monkeys (Cebinae, Platyrrhini)
    • DOI 10.1186/1471-2148-7-20
    • The evolution of the vertebrate metzincins; insights from Ciona intestinalis and Danio rerio. Huxley-Jones J, Clarke T-K, Beck C, Toubaris G, Robertson DL, Boot-Handford RP, BMC Evol Biol 2007 7 20 10.1186/1471-2148-7-20 17300728 (Pubitemid 46333802)
    • (2007) BMC Evolutionary Biology , vol.7 , pp. 20
    • Marroig, G.1
  • 29
    • 84864977995 scopus 로고    scopus 로고
    • Phylogenetic and molecular evolution of the ADAM (a disintegrin and metalloprotease) gene family from xenopus tropicalis, to Mus musculus, rattus norvegicus, and homo sapiens
    • 10.1016/j.gene.2012.07.016 22841792
    • Phylogenetic and molecular evolution of the ADAM (a disintegrin and metalloprotease) gene family from xenopus tropicalis, to Mus musculus, rattus norvegicus, and homo sapiens. Long J, Li M, Ren Q, Zhang C, Fan J, Duan Y, Chen J, Li B, Deng L, Gene 2012 507 36 43 10.1016/j.gene.2012.07.016 22841792
    • (2012) Gene , vol.507 , pp. 36-43
    • Long, J.1    Li, M.2    Ren, Q.3    Zhang, C.4    Fan, J.5    Duan, Y.6    Chen, J.7    Li, B.8    Deng, L.9
  • 30
    • 84886393017 scopus 로고    scopus 로고
    • Positive selection and the evolution of izumo genes in mammals
    • Article ID 958164
    • Positive selection and the evolution of izumo genes in mammals. Grayson P, Civetta A, Int J Evol Biol 2012 2012 7 Article ID 958164
    • (2012) Int J Evol Biol , vol.2012 , pp. 7
    • Grayson, P.1    Civetta, A.2
  • 31
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Thompson J, Higgins D, Gibson T, Nucleic Acids Res 1994 22 4673 4680 10.1093/nar/22.22.4673 7984417 (Pubitemid 24354800)
    • (1994) Nucleic Acids Research , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 32
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • 10.1093/molbev/msr121 21546353
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S, Mol Biol Evol 2011 28 2731 2739 10.1093/molbev/msr121 21546353
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 33
    • 18744382506 scopus 로고    scopus 로고
    • ProtTest: Selection of best-fit models of protein evolution
    • DOI 10.1093/bioinformatics/bti263
    • ProtTest: selection of best-fit models of protein evolution. Abascal F, Zardoya R, Posada D, Bioinformatics 2005 21 2104 2105 10.1093/bioinformatics/ bti263 15647292 (Pubitemid 40668057)
    • (2005) Bioinformatics , vol.21 , Issue.9 , pp. 2104-2105
    • Abascal, F.1    Zardoya, R.2    Posada, D.3
  • 34
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • 10.2307/2408678
    • Confidence limits on phylogenies: an approach using the bootstrap. Felsenstein J, Evolution 1985 39 783 791 10.2307/2408678
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 35
    • 34547803197 scopus 로고    scopus 로고
    • PAML 4: Phylogenetic analysis by maximum likelihood
    • DOI 10.1093/molbev/msm088
    • PAML 4: phylogenetic analysis by maximum likelihood. Yang Z, Mol Biol Evol 2007 24 1586 1591 10.1093/molbev/msm088 17483113 (Pubitemid 47236688)
    • (2007) Molecular Biology and Evolution , vol.24 , Issue.8 , pp. 1586-1591
    • Yang, Z.1
  • 36
    • 16344378246 scopus 로고    scopus 로고
    • Bayes empirical Bayes inference of amino acid sites under positive selection
    • DOI 10.1093/molbev/msi097
    • Bayes empirical bayes inference of amino acid sites under positive selection. Yang Z, Wong WSW, Nielsen R, Mol Biol Evol 2005 22 1107 1118 10.1093/molbev/msi097 15689528 (Pubitemid 40471423)
    • (2005) Molecular Biology and Evolution , vol.22 , Issue.4 , pp. 1107-1118
    • Yang, Z.1    Wong, W.S.W.2    Nielsen, R.3
  • 37
    • 0032728408 scopus 로고    scopus 로고
    • Statistical methods for testing functional divergence after gene duplication
    • 10.1093/oxfordjournals.molbev.a026080 10605109
    • Statistical methods for testing functional divergence after gene duplication. Gu X, Mol Biol Evol 1999 16 1664 1674 10.1093/oxfordjournals. molbev.a026080 10605109
    • (1999) Mol Biol Evol , vol.16 , pp. 1664-1674
    • Gu, X.1
  • 38
    • 0036205440 scopus 로고    scopus 로고
    • DIVERGE: Phylogeny-based analysis for functional-structural divergence of a protein family
    • DIVERGE: phylogeny-based analysis for functional-structural divergence of a protein family. Gu X, Vander Velden K, Bioinformatics 2002 18 500 501 10.1093/bioinformatics/18.3.500 11934757 (Pubitemid 34284959)
    • (2002) Bioinformatics , vol.18 , Issue.3 , pp. 500-501
    • Gu, X.1    Velden, K.V.2
  • 39
    • 84878925597 scopus 로고    scopus 로고
    • An update of DIVERGE software for functional divergence analysis of protein family
    • 10.1093/molbev/mst069 23589455
    • An update of DIVERGE software for functional divergence analysis of protein family. Gu X, Zou Y, Su Z, Huang W, Zhou Z, Arendsee Z, Zeng Y, Mol Biol Evol 2013 30 1713 1719 10.1093/molbev/mst069 23589455
    • (2013) Mol Biol Evol , vol.30 , pp. 1713-1719
    • Gu, X.1    Zou, Y.2    Su, Z.3    Huang, W.4    Zhou, Z.5    Arendsee, Z.6    Zeng, Y.7
  • 40
    • 0037461034 scopus 로고    scopus 로고
    • TreeSAAP: Selection on amino acid properties using phylogenetic trees
    • DOI 10.1093/bioinformatics/btg043
    • TreeSAAP: selection on amino acid properties using phylogenetic trees. Woolley S, Johnson J, Smith MJ, Crandall KA, McClellan DA, Bioinformatics 2003 19 671 672 10.1093/bioinformatics/btg043 12651734 (Pubitemid 36417070)
    • (2003) Bioinformatics , vol.19 , Issue.5 , pp. 671-672
    • Woolley, S.1    Johnson, J.2    Smith, M.J.3    Crandall, K.A.4    McClellan, D.A.5
  • 41
    • 84885182281 scopus 로고    scopus 로고
    • Fast evolution of reproductive genes: When is selection sexual?
    • Oxford, UK: Oxford University Press Singh R, Xu J, Kulathinal R
    • Fast evolution of reproductive genes: when is selection sexual? Civetta A, Rapidly evolving genes and genetic systems Oxford, UK: Oxford University Press, Singh R, Xu J, Kulathinal R, 2012 165 175
    • (2012) Rapidly Evolving Genes and Genetic Systems , pp. 165-175
    • Civetta, A.1
  • 42
    • 84859632524 scopus 로고    scopus 로고
    • Duplicate retention after small- and large-scale duplications
    • Hoboken, NJ: John Wiley & Sons Incorporated Dittmar K, Liberles D
    • Duplicate retention after small- and large-scale duplications. Maere S, Van de Peer Y, Evolution after gene duplication Hoboken, NJ: John Wiley & Sons Incorporated, Dittmar K, Liberles D, 2010 31 57
    • (2010) Evolution after Gene Duplication , pp. 31-57
    • Maere, S.1    Van De Peer, Y.2


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